# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oek00356.fasta.nr -Q ek00356.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ek00356, 395 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6817818 sequences Expectation_n fit: rho(ln(x))= 5.9915+/-0.000206; mu= 7.1526+/- 0.011 mean_var=144.3817+/-27.470, 0's: 37 Z-trim: 74 B-trim: 362 in 1/67 Lambda= 0.106738 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|544150|sp|P35659|DEK_HUMAN Protein DEK gi|3 ( 375) 2379 377.8 1.9e-102 gi|167773521|gb|ABZ92195.1| DEK oncogene (DNA bind ( 375) 2372 376.7 4e-102 gi|119575807|gb|EAW55403.1| DEK oncogene (DNA bind ( 380) 2365 375.6 8.6e-102 gi|109069803|ref|XP_001101463.1| PREDICTED: simila ( 375) 2352 373.6 3.4e-101 gi|194038067|ref|XP_001927944.1| PREDICTED: simila ( 375) 2293 364.5 1.9e-98 gi|194038065|ref|XP_001927955.1| PREDICTED: simila ( 400) 2278 362.3 9.6e-98 gi|148744915|gb|AAI42199.1| DEK protein [Bos tauru ( 375) 2272 361.3 1.7e-97 gi|149731991|ref|XP_001496643.1| PREDICTED: simila ( 380) 2256 358.8 9.7e-97 gi|73620777|sp|Q6AXS3|DEK_RAT Protein DEK gi|5 ( 378) 2209 351.6 1.5e-94 gi|73620776|sp|Q7TNV0|DEK_MOUSE Protein DEK gi ( 380) 2191 348.8 1e-93 gi|26329115|dbj|BAC28296.1| unnamed protein produc ( 380) 2180 347.1 3.2e-93 gi|126322229|ref|XP_001376206.1| PREDICTED: simila ( 372) 2125 338.7 1.1e-90 gi|74004120|ref|XP_853159.1| PREDICTED: similar to ( 361) 2119 337.7 2.1e-90 gi|114605909|ref|XP_518259.2| PREDICTED: similar t ( 308) 1951 311.8 1.2e-82 gi|60098563|emb|CAH65112.1| hypothetical protein [ ( 369) 1923 307.6 2.6e-81 gi|12841160|dbj|BAB25100.1| unnamed protein produc ( 282) 1669 268.3 1.3e-69 gi|28981321|gb|AAH48844.1| Dek protein [Mus muscul ( 270) 1538 248.1 1.5e-63 gi|51261610|gb|AAH79968.1| Dek protein [Xenopus tr ( 388) 1465 237.1 4.6e-60 gi|86577716|gb|AAI12958.1| Unknown (protein for MG ( 391) 1451 234.9 2e-59 gi|89272799|emb|CAJ82328.1| DEK oncogene (DNA bind ( 312) 1281 208.6 1.3e-51 gi|149045068|gb|EDL98154.1| DEK oncogene (DNA bind ( 315) 1258 205.1 1.6e-50 gi|74150585|dbj|BAE32316.1| unnamed protein produc ( 202) 1161 189.9 3.7e-46 gi|74202497|dbj|BAE24835.1| unnamed protein produc ( 196) 1048 172.5 6.3e-41 gi|50418317|gb|AAH77387.1| LOC398543 protein [Xeno ( 256) 881 146.9 4.1e-33 gi|27370919|gb|AAH41538.1| LOC398543 protein [Xeno ( 230) 872 145.5 1e-32 gi|167744834|pdb|2JX3|A Chain A, Nmr Solution Stru ( 131) 856 142.7 3.9e-32 gi|120537668|gb|AAI29267.1| Zgc:136346 protein [Da ( 334) 603 104.2 3.8e-20 gi|160774019|gb|AAI55224.1| Zgc:136346 protein [Da ( 390) 603 104.3 4.2e-20 gi|49901196|gb|AAH76308.1| Zgc:136346 protein [Dan ( 333) 601 103.9 4.7e-20 gi|94573477|gb|AAI16513.1| Zgc:136346 [Danio rerio ( 442) 601 104.1 5.6e-20 gi|63101817|gb|AAH95174.1| Zgc:136346 protein [Dan ( 333) 598 103.5 6.4e-20 gi|91087655|ref|XP_973504.1| PREDICTED: similar to ( 508) 552 96.6 1.1e-17 gi|158270900|gb|EDO96731.1| predicted protein [Chl ( 484) 551 96.4 1.2e-17 gi|149045066|gb|EDL98152.1| DEK oncogene (DNA bind ( 90) 471 83.2 2.1e-14 gi|159162866|pdb|1Q1V|A Chain A, Structure Of The ( 70) 419 75.1 4.7e-12 gi|57899389|dbj|BAD88036.1| putative BRI1-KD inter ( 509) 425 77.0 8.8e-12 gi|193902059|gb|EDW00926.1| GH20748 [Drosophila gr ( 701) 426 77.4 9.7e-12 gi|115634703|ref|XP_001194795.1| PREDICTED: simila ( 199) 415 75.0 1.4e-11 gi|115925190|ref|XP_001181560.1| PREDICTED: simila ( 201) 415 75.0 1.4e-11 gi|194126160|gb|EDW48203.1| GM21729 [Drosophila se ( 663) 414 75.5 3.4e-11 gi|158599147|gb|EDP36838.1| DEK protein, putative ( 408) 411 74.8 3.4e-11 gi|194114301|gb|EDW36344.1| GL17742 [Drosophila pe ( 600) 411 75.0 4.4e-11 gi|194193838|gb|EDX07414.1| GD11224 [Drosophila si ( 667) 409 74.7 5.8e-11 gi|28380772|gb|AAF57943.2| CG5935-PA, isoform A [D ( 663) 403 73.8 1.1e-10 gi|190658486|gb|EDV55699.1| GG20636 [Drosophila er ( 665) 403 73.8 1.1e-10 gi|21645255|gb|AAM70891.1| CG5935-PC, isoform C [D ( 667) 403 73.8 1.1e-10 gi|17862130|gb|AAL39542.1| LD10094p [Drosophila me ( 669) 403 73.8 1.1e-10 gi|194178253|gb|EDW91864.1| Dek [Drosophila yakuba ( 665) 399 73.2 1.7e-10 gi|193911140|gb|EDW10007.1| GI20832 [Drosophila mo ( 662) 398 73.0 1.9e-10 gi|38047689|gb|AAR09747.1| similar to Drosophila m ( 145) 385 70.2 2.8e-10 >>gi|544150|sp|P35659|DEK_HUMAN Protein DEK gi|30503 (375 aa) initn: 2379 init1: 2379 opt: 2379 Z-score: 1994.4 bits: 377.8 E(): 1.9e-102 Smith-Waterman score: 2379; 99.467% identity (100.000% similar) in 375 aa overlap (21-395:1-375) 10 20 30 40 50 60 ek0035 RTSSCPRVPGPRRPKSAVHSMSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDD :::::::::::::::::::::::::::::::::::::::: gi|544 MSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDD 10 20 30 40 70 80 90 100 110 120 ek0035 EEEEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|544 EEEEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSK 50 60 70 80 90 100 130 140 150 160 170 180 ek0035 KKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSAQYKKKEEMLKKFRNAMLKSI :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|544 KKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSVQYKKKEEMLKKFRNAMLKSI 110 120 130 140 150 160 190 200 210 220 230 240 ek0035 CEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKAKRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|544 CEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKAKRT 170 180 190 200 210 220 250 260 270 280 290 300 ek0035 KCPEILSDESSSDEDEKKNKEESSEDEDKESEEEPPKKTAKREKPKQKATSKSKKSVKSA ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|544 KCPEILSDESSSDEDEKKNKEESSDDEDKESEEEPPKKTAKREKPKQKATSKSKKSVKSA 230 240 250 260 270 280 310 320 330 340 350 360 ek0035 NVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|544 NVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEE 290 300 310 320 330 340 370 380 390 ek0035 VTMKQICKKVYENYPTYDLTERKDFIKTTVKELIS ::::::::::::::::::::::::::::::::::: gi|544 VTMKQICKKVYENYPTYDLTERKDFIKTTVKELIS 350 360 370 >>gi|167773521|gb|ABZ92195.1| DEK oncogene (DNA binding) (375 aa) initn: 2372 init1: 2372 opt: 2372 Z-score: 1988.5 bits: 376.7 E(): 4e-102 Smith-Waterman score: 2372; 99.200% identity (99.733% similar) in 375 aa overlap (21-395:1-375) 10 20 30 40 50 60 ek0035 RTSSCPRVPGPRRPKSAVHSMSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDD ::::::::::::::::::::::::::::::::::: :::: gi|167 MSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEADEDD 10 20 30 40 70 80 90 100 110 120 ek0035 EEEEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|167 EEEEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSK 50 60 70 80 90 100 130 140 150 160 170 180 ek0035 KKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSAQYKKKEEMLKKFRNAMLKSI :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|167 KKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSVQYKKKEEMLKKFRNAMLKSI 110 120 130 140 150 160 190 200 210 220 230 240 ek0035 CEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKAKRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|167 CEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKAKRT 170 180 190 200 210 220 250 260 270 280 290 300 ek0035 KCPEILSDESSSDEDEKKNKEESSEDEDKESEEEPPKKTAKREKPKQKATSKSKKSVKSA ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|167 KCPEILSDESSSDEDEKKNKEESSDDEDKESEEEPPKKTAKREKPKQKATSKSKKSVKSA 230 240 250 260 270 280 310 320 330 340 350 360 ek0035 NVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|167 NVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEE 290 300 310 320 330 340 370 380 390 ek0035 VTMKQICKKVYENYPTYDLTERKDFIKTTVKELIS ::::::::::::::::::::::::::::::::::: gi|167 VTMKQICKKVYENYPTYDLTERKDFIKTTVKELIS 350 360 370 >>gi|119575807|gb|EAW55403.1| DEK oncogene (DNA binding) (380 aa) initn: 2549 init1: 2365 opt: 2365 Z-score: 1982.7 bits: 375.6 E(): 8.6e-102 Smith-Waterman score: 2365; 99.196% identity (100.000% similar) in 373 aa overlap (21-393:1-373) 10 20 30 40 50 60 ek0035 RTSSCPRVPGPRRPKSAVHSMSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDD :::::::::::::::::::::::::::::::::::::::: gi|119 MSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDD 10 20 30 40 70 80 90 100 110 120 ek0035 EEEEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EEEEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSK 50 60 70 80 90 100 130 140 150 160 170 180 ek0035 KKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSAQYKKKEEMLKKFRNAMLKSI :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|119 KKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSVQYKKKEEMLKKFRNAMLKSI 110 120 130 140 150 160 190 200 210 220 230 240 ek0035 CEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKAKRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 CEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKAKRT 170 180 190 200 210 220 250 260 270 280 290 300 ek0035 KCPEILSDESSSDEDEKKNKEESSEDEDKESEEEPPKKTAKREKPKQKATSKSKKSVKSA ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|119 KCPEILSDESSSDEDEKKNKEESSDDEDKESEEEPPKKTAKREKPKQKATSKSKKSVKSA 230 240 250 260 270 280 310 320 330 340 350 360 ek0035 NVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEE 290 300 310 320 330 340 370 380 390 ek0035 VTMKQICKKVYENYPTYDLTERKDFIKTTVKELIS ::::::::::::::::::::::::::::::::. gi|119 VTMKQICKKVYENYPTYDLTERKDFIKTTVKEVNISVFQV 350 360 370 380 >>gi|109069803|ref|XP_001101463.1| PREDICTED: similar to (375 aa) initn: 2352 init1: 2352 opt: 2352 Z-score: 1971.9 bits: 373.6 E(): 3.4e-101 Smith-Waterman score: 2352; 98.400% identity (99.733% similar) in 375 aa overlap (21-395:1-375) 10 20 30 40 50 60 ek0035 RTSSCPRVPGPRRPKSAVHSMSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDD ::::::::::::::.::::::::::::::::::::::::: gi|109 MSASAPAAEGEGTPAQPASEKEPEMPGPREESEEEEDEDD 10 20 30 40 70 80 90 100 110 120 ek0035 EEEEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSK .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DEEEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSK 50 60 70 80 90 100 130 140 150 160 170 180 ek0035 KKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSAQYKKKEEMLKKFRNAMLKSI :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|109 KKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSVQYKKKEEMLKKFRNAMLKSI 110 120 130 140 150 160 190 200 210 220 230 240 ek0035 CEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKAKRT ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|109 CEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTSSKGSKKERNSSGMARKAKRT 170 180 190 200 210 220 250 260 270 280 290 300 ek0035 KCPEILSDESSSDEDEKKNKEESSEDEDKESEEEPPKKTAKREKPKQKATSKSKKSVKSA ::::::::::::::::::::::::.:.::::::::::::::::::::::::::::::::: gi|109 KCPEILSDESSSDEDEKKNKEESSDDDDKESEEEPPKKTAKREKPKQKATSKSKKSVKSA 230 240 250 260 270 280 310 320 330 340 350 360 ek0035 NVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEE 290 300 310 320 330 340 370 380 390 ek0035 VTMKQICKKVYENYPTYDLTERKDFIKTTVKELIS ::::::::::::::::::::::::::::::::::: gi|109 VTMKQICKKVYENYPTYDLTERKDFIKTTVKELIS 350 360 370 >>gi|194038067|ref|XP_001927944.1| PREDICTED: similar to (375 aa) initn: 2293 init1: 2293 opt: 2293 Z-score: 1922.8 bits: 364.5 E(): 1.9e-98 Smith-Waterman score: 2293; 95.200% identity (99.467% similar) in 375 aa overlap (21-395:1-375) 10 20 30 40 50 60 ek0035 RTSSCPRVPGPRRPKSAVHSMSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDD ::.:.:::::::::.::::::::::::::::::::...:. gi|194 MSSSGPAAEGEGTPAQPASEKEPEMPGPREESEEEDEDDE 10 20 30 40 70 80 90 100 110 120 ek0035 EEEEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 EEEEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSK 50 60 70 80 90 100 130 140 150 160 170 180 ek0035 KKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSAQYKKKEEMLKKFRNAMLKSI ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|194 KKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSIQYKKKEEMLKKFRNAMLKSI 110 120 130 140 150 160 190 200 210 220 230 240 ek0035 CEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKAKRT ::::::::::::::::::::::::::::::::::::::: :::.:::::::::::::::: gi|194 CEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTSSKGNKKERNSSGMARKAKRT 170 180 190 200 210 220 250 260 270 280 290 300 ek0035 KCPEILSDESSSDEDEKKNKEESSEDEDKESEEEPPKKTAKREKPKQKATSKSKKSVKSA ::::::::::::::::::::::::..:::::::::::::::.:::::::::::::::::: gi|194 KCPEILSDESSSDEDEKKNKEESSDEEDKESEEEPPKKTAKKEKPKQKATSKSKKSVKSA 230 240 250 260 270 280 310 320 330 340 350 360 ek0035 NVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEE ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|194 NVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETVKKLLASANLEE 290 300 310 320 330 340 370 380 390 ek0035 VTMKQICKKVYENYPTYDLTERKDFIKTTVKELIS ::::::::.:::.::.:::::::.::::::::::: gi|194 VTMKQICKEVYESYPAYDLTERKEFIKTTVKELIS 350 360 370 >>gi|194038065|ref|XP_001927955.1| PREDICTED: similar to (400 aa) initn: 2278 init1: 2278 opt: 2278 Z-score: 1910.0 bits: 362.3 E(): 9.6e-98 Smith-Waterman score: 2278; 95.161% identity (99.462% similar) in 372 aa overlap (21-392:1-372) 10 20 30 40 50 60 ek0035 RTSSCPRVPGPRRPKSAVHSMSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDD ::.:.:::::::::.::::::::::::::::::::...:. gi|194 MSSSGPAAEGEGTPAQPASEKEPEMPGPREESEEEDEDDE 10 20 30 40 70 80 90 100 110 120 ek0035 EEEEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 EEEEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSK 50 60 70 80 90 100 130 140 150 160 170 180 ek0035 KKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSAQYKKKEEMLKKFRNAMLKSI ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|194 KKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSIQYKKKEEMLKKFRNAMLKSI 110 120 130 140 150 160 190 200 210 220 230 240 ek0035 CEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKAKRT ::::::::::::::::::::::::::::::::::::::: :::.:::::::::::::::: gi|194 CEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTSSKGNKKERNSSGMARKAKRT 170 180 190 200 210 220 250 260 270 280 290 300 ek0035 KCPEILSDESSSDEDEKKNKEESSEDEDKESEEEPPKKTAKREKPKQKATSKSKKSVKSA ::::::::::::::::::::::::..:::::::::::::::.:::::::::::::::::: gi|194 KCPEILSDESSSDEDEKKNKEESSDEEDKESEEEPPKKTAKKEKPKQKATSKSKKSVKSA 230 240 250 260 270 280 310 320 330 340 350 360 ek0035 NVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEE ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|194 NVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETVKKLLASANLEE 290 300 310 320 330 340 370 380 390 ek0035 VTMKQICKKVYENYPTYDLTERKDFIKTTVKELIS ::::::::.:::.::.:::::::.:::::::: gi|194 VTMKQICKEVYESYPAYDLTERKEFIKTTVKEYRRKLGPDILFKMLQSCLLLEHHSNMPL 350 360 370 380 390 400 >>gi|148744915|gb|AAI42199.1| DEK protein [Bos taurus] (375 aa) initn: 2272 init1: 2272 opt: 2272 Z-score: 1905.3 bits: 361.3 E(): 1.7e-97 Smith-Waterman score: 2272; 94.400% identity (98.933% similar) in 375 aa overlap (21-395:1-375) 10 20 30 40 50 60 ek0035 RTSSCPRVPGPRRPKSAVHSMSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDD ::.:. :::::..:.::::::::.:::::::::::...:: gi|148 MSSSGTAAEGEAAPAQPASEKEPDMPGPREESEEEDEDDD 10 20 30 40 70 80 90 100 110 120 ek0035 EEEEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EEEEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSK 50 60 70 80 90 100 130 140 150 160 170 180 ek0035 KKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSAQYKKKEEMLKKFRNAMLKSI ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|148 KKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSIQYKKKEEMLKKFRNAMLKSI 110 120 130 140 150 160 190 200 210 220 230 240 ek0035 CEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKAKRT ::::::::::::::::::::::::::::::::::::::. :::.:::::::::::::::: gi|148 CEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKSSSKGNKKERNSSGMARKAKRT 170 180 190 200 210 220 250 260 270 280 290 300 ek0035 KCPEILSDESSSDEDEKKNKEESSEDEDKESEEEPPKKTAKREKPKQKATSKSKKSVKSA ::::::::::::::.::::::::::::::::::::::::.:::::::::: ::::::::: gi|148 KCPEILSDESSSDEEEKKNKEESSEDEDKESEEEPPKKTSKREKPKQKATPKSKKSVKSA 230 240 250 260 270 280 310 320 330 340 350 360 ek0035 NVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEE ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|148 NVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETVKKLLASANLEE 290 300 310 320 330 340 370 380 390 ek0035 VTMKQICKKVYENYPTYDLTERKDFIKTTVKELIS ::::::::.::::::.:::::::.::::::::::: gi|148 VTMKQICKEVYENYPAYDLTERKEFIKTTVKELIS 350 360 370 >>gi|149731991|ref|XP_001496643.1| PREDICTED: similar to (380 aa) initn: 2477 init1: 2256 opt: 2256 Z-score: 1891.9 bits: 358.8 E(): 9.7e-97 Smith-Waterman score: 2256; 93.834% identity (98.660% similar) in 373 aa overlap (21-393:1-373) 10 20 30 40 50 60 ek0035 RTSSCPRVPGPRRPKSAVHSMSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDD ::...:::::::::.::::::::::::: :::::...:.. gi|149 MSSTGPAAEGEGTPAQPASEKEPEMPGPTEESEEDDEEEE 10 20 30 40 70 80 90 100 110 120 ek0035 EEEEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EEEEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSK 50 60 70 80 90 100 130 140 150 160 170 180 ek0035 KKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSAQYKKKEEMLKKFRNAMLKSI ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|149 KKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSIQYKKKEEMLKKFRNAMLKSI 110 120 130 140 150 160 190 200 210 220 230 240 ek0035 CEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKAKRT ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|149 CEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTSSKGSKKERNSSGMARKAKRT 170 180 190 200 210 220 250 260 270 280 290 300 ek0035 KCPEILSDESSSDEDEKKNKEESSEDEDKESEEEPPKKTAKREKPKQKATSKSKKSVKSA ::::::::::::::::::::::::.::::::::::::::.:::: ::::: :::::.::: gi|149 KCPEILSDESSSDEDEKKNKEESSDDEDKESEEEPPKKTSKREKAKQKATPKSKKSIKSA 230 240 250 260 270 280 310 320 330 340 350 360 ek0035 NVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEE ::::::::::::::::::::::::::::::::::::::::::::::::.:::::.::::: gi|149 NVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETVKKLLANANLEE 290 300 310 320 330 340 370 380 390 ek0035 VTMKQICKKVYENYPTYDLTERKDFIKTTVKELIS ::::::::.::::::.:::::::.::::::::. gi|149 VTMKQICKEVYENYPAYDLTERKEFIKTTVKEVNISTFSN 350 360 370 380 >>gi|73620777|sp|Q6AXS3|DEK_RAT Protein DEK gi|50927 (378 aa) initn: 1632 init1: 1374 opt: 2209 Z-score: 1852.9 bits: 351.6 E(): 1.5e-94 Smith-Waterman score: 2209; 92.287% identity (97.872% similar) in 376 aa overlap (22-395:3-378) 10 20 30 40 50 60 ek0035 RTSSCPRVPGPRRPKSAVHSMSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDD .:.::::::: ::: ::::::::::::::::::::.::: gi|736 MSAAAAPAAEGEDTPTPPASEKEPEMPGPREESEEEEEEDD 10 20 30 40 70 80 90 100 110 ek0035 EEE-EEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLS ..: :::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|736 DDEDEEEEKEKSLIVEGKREKRKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLS 50 60 70 80 90 100 120 130 140 150 160 170 ek0035 KKKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSAQYKKKEEMLKKFRNAMLKS ::::::::::::::::::::::::::::::::::::::::.:::::::::::.::::::: gi|736 KKKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSTQYKKKEEMLKKYRNAMLKS 110 120 130 140 150 160 180 190 200 210 220 230 ek0035 ICEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKAKR :::::::::::::::::::::::::::::::::::::::. :::::::::::: .::.:. gi|736 ICEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKSSSKGSKKERNSSGTTRKSKQ 170 180 190 200 210 220 240 250 260 270 280 290 ek0035 TKCPEILSDESSSDEDEKKNKEESSEDEDKESEEE-PPKKTAKREKPKQKATSKSKKSVK :::::::::::::::::::::.::::::.:::::: :::::.:.:: :::::.::::::: gi|736 TKCPEILSDESSSDEDEKKNKDESSEDEEKESEEEQPPKKTSKKEKAKQKATTKSKKSVK 230 240 250 260 270 280 300 310 320 330 340 350 ek0035 SANVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETIKKLLASANL ::::::::::::::::::::::: ::::::::::::::::::::::::::.:::::.::: gi|736 SANVKKADSSTTKKNQNSSKKESGSEDSSDDEPLIKKLKKPPTDEELKETVKKLLADANL 290 300 310 320 330 340 360 370 380 390 ek0035 EEVTMKQICKKVYENYPTYDLTERKDFIKTTVKELIS ::::::::::.::::::.::::::::::::::::::: gi|736 EEVTMKQICKEVYENYPAYDLTERKDFIKTTVKELIS 350 360 370 >>gi|73620776|sp|Q7TNV0|DEK_MOUSE Protein DEK gi|334 (380 aa) initn: 1607 init1: 1380 opt: 2191 Z-score: 1837.8 bits: 348.8 E(): 1e-93 Smith-Waterman score: 2191; 91.534% identity (97.354% similar) in 378 aa overlap (22-395:3-380) 10 20 30 40 50 ek0035 RTSSCPRVPGPRRPKSAVHSMSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEE--DE .:.::::::: .:. :.:::::::::::::::::: :: gi|736 MSAAAAPAAEGEDAPVPPSSEKEPEMPGPREESEEEEEDDE 10 20 30 40 60 70 80 90 100 110 ek0035 DDEEE-EEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFF ::.:: ::::::::::::::::::::::::::::::::::::..:::::::::::::::: gi|736 DDDEEDEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTVTQGKGQKLCEIERIHFF 50 60 70 80 90 100 120 130 140 150 160 170 ek0035 LSKKKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSAQYKKKEEMLKKFRNAML ::::: ::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|736 LSKKKPDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSTQYKKKEEMLKKFRNAML 110 120 130 140 150 160 180 190 200 210 220 230 ek0035 KSICEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKA :::::::::::::::::::::::::::::::::::::::::. :::::::::::: .::. gi|736 KSICEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKSSSKGSKKERNSSGTTRKS 170 180 190 200 210 220 240 250 260 270 280 290 ek0035 KRTKCPEILSDESSSDEDEKKNKEESSEDEDKESEEE-PPKKTAKREKPKQKATSKSKKS :.::::::::::::::::::::::::::::.:::::: :::::.:.:: :::::.::::: gi|736 KQTKCPEILSDESSSDEDEKKNKEESSEDEEKESEEEQPPKKTSKKEKAKQKATAKSKKS 230 240 250 260 270 280 300 310 320 330 340 350 ek0035 VKSANVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETIKKLLASA ::::::::::::::::::.:::::::::::::::::::::::::::::::::.:::::.: gi|736 VKSANVKKADSSTTKKNQKSSKKESESEDSSDDEPLIKKLKKPPTDEELKETVKKLLADA 290 300 310 320 330 340 360 370 380 390 ek0035 NLEEVTMKQICKKVYENYPTYDLTERKDFIKTTVKELIS ::::::::::::.::::::.::::::::::::::::::: gi|736 NLEEVTMKQICKEVYENYPAYDLTERKDFIKTTVKELIS 350 360 370 380 395 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sat Aug 9 00:57:39 2008 done: Sat Aug 9 01:00:09 2008 Total Scan time: 804.410 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]