# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oek00360.fasta.nr -Q ek00360.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ek00360, 605 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6821667 sequences Expectation_n fit: rho(ln(x))= 5.2722+/-0.000185; mu= 11.9598+/- 0.010 mean_var=73.4131+/-14.152, 0's: 35 Z-trim: 55 B-trim: 27 in 1/67 Lambda= 0.149688 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62089080|dbj|BAD92984.1| itchy homolog E3 ubiqu ( 605) 4254 928.1 0 gi|2708329|gb|AAC04845.1| atrophin-1 interacting p ( 739) 4243 925.8 0 gi|13785518|gb|AAK39399.1|AF095745_1 ubiquitin pro ( 862) 4243 925.8 0 gi|119596683|gb|EAW76277.1| itchy homolog E3 ubiqu ( 887) 4243 925.8 0 gi|37537897|sp|Q96J02|ITCH_HUMAN E3 ubiquitin-prot ( 903) 4243 925.9 0 gi|194224335|ref|XP_001916756.1| PREDICTED: itchy ( 862) 4213 919.4 0 gi|73991667|ref|XP_851460.1| PREDICTED: similar to ( 862) 4209 918.5 0 gi|126010776|gb|AAI33504.1| ITCH protein [Bos taur ( 862) 4209 918.5 0 gi|2827198|gb|AAB99764.1| ubiquitin protein ligase ( 854) 4206 917.8 0 gi|37537881|sp|Q8C863|ITCH_MOUSE E3 ubiquitin-prot ( 864) 4206 917.9 0 gi|149030909|gb|EDL85936.1| itchy homolog E3 ubiqu ( 864) 4191 914.6 0 gi|48686709|gb|AAT46068.1| itch E3 ubiquitin ligas ( 854) 4160 907.9 0 gi|73991655|ref|XP_863657.1| PREDICTED: similar to ( 867) 4143 904.2 0 gi|73991665|ref|XP_863767.1| PREDICTED: similar to ( 857) 4134 902.3 0 gi|73991663|ref|XP_863745.1| PREDICTED: similar to ( 857) 4133 902.1 0 gi|73991657|ref|XP_863680.1| PREDICTED: similar to ( 868) 4125 900.4 0 gi|73991659|ref|XP_863699.1| PREDICTED: similar to ( 858) 4112 897.5 0 gi|126291725|ref|XP_001381388.1| PREDICTED: simila ( 863) 4086 891.9 0 gi|73991661|ref|XP_863720.1| PREDICTED: similar to ( 854) 4082 891.1 0 gi|118100508|ref|XP_417330.2| PREDICTED: similar t ( 878) 3974 867.8 0 gi|116487466|gb|AAI25720.1| Itchy E3 ubiquitin pro ( 853) 3832 837.1 0 gi|119596684|gb|EAW76278.1| itchy homolog E3 ubiqu ( 871) 3814 833.2 0 gi|40352723|gb|AAH64678.1| Itch protein [Mus muscu ( 806) 3755 820.4 0 gi|189536307|ref|XP_001920569.1| PREDICTED: simila ( 871) 3749 819.2 0 gi|47220702|emb|CAG11771.1| unnamed protein produc ( 872) 3362 735.6 1.3e-209 gi|26339254|dbj|BAC33298.1| unnamed protein produc ( 759) 3339 730.6 3.7e-208 gi|112418540|gb|AAI21962.1| Wwp1 protein [Xenopus ( 914) 3295 721.1 3.1e-205 gi|126322441|ref|XP_001378953.1| PREDICTED: hypoth ( 896) 3256 712.7 1.1e-202 gi|60099163|emb|CAH65412.1| hypothetical protein [ ( 922) 3252 711.9 2e-202 gi|149637121|ref|XP_001506950.1| PREDICTED: hypoth (1107) 3244 710.2 7.5e-202 gi|73999328|ref|XP_861256.1| PREDICTED: similar to ( 927) 3237 708.6 1.9e-201 gi|109086867|ref|XP_001083053.1| PREDICTED: simila ( 927) 3226 706.2 9.6e-201 gi|26328859|dbj|BAC28168.1| unnamed protein produc ( 617) 3212 703.1 5.7e-200 gi|114620804|ref|XP_001135661.1| PREDICTED: hypoth ( 927) 3214 703.6 5.8e-200 gi|194214791|ref|XP_001488338.2| PREDICTED: WW dom ( 922) 3213 703.4 6.7e-200 gi|116283460|gb|AAH26829.1| Wwp1 protein [Mus musc ( 787) 3212 703.2 6.9e-200 gi|32171814|sp|Q8BZZ3|WWP1_MOUSE NEDD4-like E3 ubi ( 918) 3212 703.2 7.8e-200 gi|79158887|gb|AAI08131.1| WW domain containing E3 ( 921) 3209 702.6 1.2e-199 gi|66911019|gb|AAH97386.1| WW domain containing E3 ( 918) 3208 702.3 1.4e-199 gi|73999330|ref|XP_861286.1| PREDICTED: similar to ( 684) 3205 701.6 1.8e-199 gi|67971800|dbj|BAE02242.1| unnamed protein produc ( 684) 3205 701.6 1.8e-199 gi|109086865|ref|XP_001083173.1| PREDICTED: simila ( 922) 3205 701.7 2.2e-199 gi|57107819|ref|XP_535119.1| PREDICTED: similar to ( 922) 3205 701.7 2.2e-199 gi|194037095|ref|XP_001927609.1| PREDICTED: WW dom ( 923) 3205 701.7 2.2e-199 gi|74215760|dbj|BAE23421.1| unnamed protein produc ( 918) 3202 701.1 3.5e-199 gi|109086869|ref|XP_001082937.1| PREDICTED: simila ( 922) 3202 701.1 3.5e-199 gi|114620802|ref|XP_519843.2| PREDICTED: hypotheti ( 922) 3193 699.1 1.3e-198 gi|32171908|sp|Q9H0M0|WWP1_HUMAN NEDD4-like E3 ubi ( 922) 3193 699.1 1.3e-198 gi|60654423|gb|AAX29902.1| WW domain-containing pr ( 923) 3193 699.1 1.3e-198 gi|114620806|ref|XP_001135577.1| PREDICTED: hypoth ( 922) 3191 698.7 1.8e-198 >>gi|62089080|dbj|BAD92984.1| itchy homolog E3 ubiquitin (605 aa) initn: 4254 init1: 4254 opt: 4254 Z-score: 4961.5 bits: 928.1 E(): 0 Smith-Waterman score: 4254; 100.000% identity (100.000% similar) in 605 aa overlap (1-605:1-605) 10 20 30 40 50 60 ek0036 EGATSGLIIPLTISGGSGPRPLNPVTQAPLPPGWEQRVDQHGRVYYVDHVEKRTTWDRPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EGATSGLIIPLTISGGSGPRPLNPVTQAPLPPGWEQRVDQHGRVYYVDHVEKRTTWDRPE 10 20 30 40 50 60 70 80 90 100 110 120 ek0036 PLPPGWERRVDNMGRIYYVDHFTRTTTWQRPTLESVRNYEQWQLQRSQLQGAMQQFNQRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PLPPGWERRVDNMGRIYYVDHFTRTTTWQRPTLESVRNYEQWQLQRSQLQGAMQQFNQRF 70 80 90 100 110 120 130 140 150 160 170 180 ek0036 IYGNQDLFATSQSKEFDPLGPLPPGWEKRTDSNGRVYFVNHNTRITQWEYPRSQGQLNEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 IYGNQDLFATSQSKEFDPLGPLPPGWEKRTDSNGRVYFVNHNTRITQWEYPRSQGQLNEK 130 140 150 160 170 180 190 200 210 220 230 240 ek0036 PLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGKSALDNGPQIAYVRDFKAKVQYFRFW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGKSALDNGPQIAYVRDFKAKVQYFRFW 190 200 210 220 230 240 250 260 270 280 290 300 ek0036 CQQLAMPQHIKITVTRKTLFEDSFQQIMSFSPQDLRRRLWVIFPGEEGLDYGGVAREWFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 CQQLAMPQHIKITVTRKTLFEDSFQQIMSFSPQDLRRRLWVIFPGEEGLDYGGVAREWFF 250 260 270 280 290 300 310 320 330 340 350 360 ek0036 LLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFRFIGRFIAMALFHGKFIDTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFRFIGRFIAMALFHGKFIDTG 310 320 330 340 350 360 370 380 390 400 410 420 ek0036 FSLPFYKRILNKPVGLKDLESIDPEFYNSLIWVKENNIEECDLEMYFSVDKEILGEIKSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 FSLPFYKRILNKPVGLKDLESIDPEFYNSLIWVKENNIEECDLEMYFSVDKEILGEIKSH 370 380 390 400 410 420 430 440 450 460 470 480 ek0036 DLKPNGGNILVTEENKEEYIRMVAEWRLSRGVEEQTQAFFEGFNEILPQQYLQYFDAKEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DLKPNGGNILVTEENKEEYIRMVAEWRLSRGVEEQTQAFFEGFNEILPQQYLQYFDAKEL 430 440 450 460 470 480 490 500 510 520 530 540 ek0036 EVLLCGMQEIDLNDWQRHAIYRHYARTSKQIMWFWQFVKEIDNEKRMRLLQFVTGTCRLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EVLLCGMQEIDLNDWQRHAIYRHYARTSKQIMWFWQFVKEIDNEKRMRLLQFVTGTCRLP 490 500 510 520 530 540 550 560 570 580 590 600 ek0036 VGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETE 550 560 570 580 590 600 ek0036 GFGQE ::::: gi|620 GFGQE >>gi|2708329|gb|AAC04845.1| atrophin-1 interacting prote (739 aa) initn: 4243 init1: 4243 opt: 4243 Z-score: 4947.5 bits: 925.8 E(): 0 Smith-Waterman score: 4243; 99.835% identity (99.835% similar) in 605 aa overlap (1-605:135-739) 10 20 30 ek0036 EGATSGLIIPLTISGGSGPRPLNPVTQAPL :::::::::::::::::::::::::::::: gi|270 SVNGSPSATSESDGSSTGSLPPTNTNTNTSEGATSGLIIPLTISGGSGPRPLNPVTQAPL 110 120 130 140 150 160 40 50 60 70 80 90 ek0036 PPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|270 PPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQR 170 180 190 200 210 220 100 110 120 130 140 150 ek0036 PTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFATSQSKEFDPLGPLPPGWEKRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|270 PTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFATSQSKEFDPLGPLPPGWEKRT 230 240 250 260 270 280 160 170 180 190 200 210 ek0036 DSNGRVYFVNHNTRITQWEYPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYID ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: gi|270 DSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYID 290 300 310 320 330 340 220 230 240 250 260 270 ek0036 PRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|270 PRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSF 350 360 370 380 390 400 280 290 300 310 320 330 ek0036 SPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|270 SPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPAS 410 420 430 440 450 460 340 350 360 370 380 390 ek0036 YINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|270 YINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSL 470 480 490 500 510 520 400 410 420 430 440 450 ek0036 IWVKENNIEECDLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|270 IWVKENNIEECDLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSR 530 540 550 560 570 580 460 470 480 490 500 510 ek0036 GVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRHYARTSKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|270 GVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRHYARTSKQ 590 600 610 620 630 640 520 530 540 550 560 570 ek0036 IMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|270 IMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRS 650 660 670 680 690 700 580 590 600 ek0036 HTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE ::::::::::::::::::::::::::::::::::: gi|270 HTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE 710 720 730 >>gi|13785518|gb|AAK39399.1|AF095745_1 ubiquitin protein (862 aa) initn: 4243 init1: 4243 opt: 4243 Z-score: 4946.5 bits: 925.8 E(): 0 Smith-Waterman score: 4243; 99.835% identity (99.835% similar) in 605 aa overlap (1-605:258-862) 10 20 30 ek0036 EGATSGLIIPLTISGGSGPRPLNPVTQAPL :::::::::::::::::::::::::::::: gi|137 SVNGSPSATSESDGSSTGSLPPTNTNTNTSEGATSGLIIPLTISGGSGPRPLNPVTQAPL 230 240 250 260 270 280 40 50 60 70 80 90 ek0036 PPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|137 PPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQR 290 300 310 320 330 340 100 110 120 130 140 150 ek0036 PTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFATSQSKEFDPLGPLPPGWEKRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|137 PTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFATSQSKEFDPLGPLPPGWEKRT 350 360 370 380 390 400 160 170 180 190 200 210 ek0036 DSNGRVYFVNHNTRITQWEYPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYID ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: gi|137 DSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYID 410 420 430 440 450 460 220 230 240 250 260 270 ek0036 PRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|137 PRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSF 470 480 490 500 510 520 280 290 300 310 320 330 ek0036 SPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|137 SPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPAS 530 540 550 560 570 580 340 350 360 370 380 390 ek0036 YINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|137 YINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSL 590 600 610 620 630 640 400 410 420 430 440 450 ek0036 IWVKENNIEECDLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|137 IWVKENNIEECDLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSR 650 660 670 680 690 700 460 470 480 490 500 510 ek0036 GVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRHYARTSKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|137 GVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRHYARTSKQ 710 720 730 740 750 760 520 530 540 550 560 570 ek0036 IMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|137 IMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRS 770 780 790 800 810 820 580 590 600 ek0036 HTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE ::::::::::::::::::::::::::::::::::: gi|137 HTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE 830 840 850 860 >>gi|119596683|gb|EAW76277.1| itchy homolog E3 ubiquitin (887 aa) initn: 4243 init1: 4243 opt: 4243 Z-score: 4946.3 bits: 925.8 E(): 0 Smith-Waterman score: 4243; 99.835% identity (99.835% similar) in 605 aa overlap (1-605:283-887) 10 20 30 ek0036 EGATSGLIIPLTISGGSGPRPLNPVTQAPL :::::::::::::::::::::::::::::: gi|119 SVNGSPSATSESDGSSTGSLPPTNTNTNTSEGATSGLIIPLTISGGSGPRPLNPVTQAPL 260 270 280 290 300 310 40 50 60 70 80 90 ek0036 PPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQR 320 330 340 350 360 370 100 110 120 130 140 150 ek0036 PTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFATSQSKEFDPLGPLPPGWEKRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFATSQSKEFDPLGPLPPGWEKRT 380 390 400 410 420 430 160 170 180 190 200 210 ek0036 DSNGRVYFVNHNTRITQWEYPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYID ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: gi|119 DSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYID 440 450 460 470 480 490 220 230 240 250 260 270 ek0036 PRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSF 500 510 520 530 540 550 280 290 300 310 320 330 ek0036 SPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPAS 560 570 580 590 600 610 340 350 360 370 380 390 ek0036 YINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSL 620 630 640 650 660 670 400 410 420 430 440 450 ek0036 IWVKENNIEECDLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IWVKENNIEECDLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSR 680 690 700 710 720 730 460 470 480 490 500 510 ek0036 GVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRHYARTSKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRHYARTSKQ 740 750 760 770 780 790 520 530 540 550 560 570 ek0036 IMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRS 800 810 820 830 840 850 580 590 600 ek0036 HTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE ::::::::::::::::::::::::::::::::::: gi|119 HTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE 860 870 880 >>gi|37537897|sp|Q96J02|ITCH_HUMAN E3 ubiquitin-protein (903 aa) initn: 4243 init1: 4243 opt: 4243 Z-score: 4946.2 bits: 925.9 E(): 0 Smith-Waterman score: 4243; 99.835% identity (99.835% similar) in 605 aa overlap (1-605:299-903) 10 20 30 ek0036 EGATSGLIIPLTISGGSGPRPLNPVTQAPL :::::::::::::::::::::::::::::: gi|375 SVNGSPSATSESDGSSTGSLPPTNTNTNTSEGATSGLIIPLTISGGSGPRPLNPVTQAPL 270 280 290 300 310 320 40 50 60 70 80 90 ek0036 PPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 PPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQR 330 340 350 360 370 380 100 110 120 130 140 150 ek0036 PTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFATSQSKEFDPLGPLPPGWEKRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 PTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFATSQSKEFDPLGPLPPGWEKRT 390 400 410 420 430 440 160 170 180 190 200 210 ek0036 DSNGRVYFVNHNTRITQWEYPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYID ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: gi|375 DSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYID 450 460 470 480 490 500 220 230 240 250 260 270 ek0036 PRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 PRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSF 510 520 530 540 550 560 280 290 300 310 320 330 ek0036 SPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 SPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPAS 570 580 590 600 610 620 340 350 360 370 380 390 ek0036 YINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 YINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSL 630 640 650 660 670 680 400 410 420 430 440 450 ek0036 IWVKENNIEECDLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 IWVKENNIEECDLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSR 690 700 710 720 730 740 460 470 480 490 500 510 ek0036 GVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRHYARTSKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 GVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRHYARTSKQ 750 760 770 780 790 800 520 530 540 550 560 570 ek0036 IMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 IMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRS 810 820 830 840 850 860 580 590 600 ek0036 HTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE ::::::::::::::::::::::::::::::::::: gi|375 HTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE 870 880 890 900 >>gi|194224335|ref|XP_001916756.1| PREDICTED: itchy E3 u (862 aa) initn: 4213 init1: 4213 opt: 4213 Z-score: 4911.5 bits: 919.4 E(): 0 Smith-Waterman score: 4213; 98.843% identity (99.504% similar) in 605 aa overlap (1-605:258-862) 10 20 30 ek0036 EGATSGLIIPLTISGGSGPRPLNPVTQAPL ::::::::::::::::::::::::: :::: gi|194 SVNGSPSATSESDGSSTGSLPLTNTNSNTSEGATSGLIIPLTISGGSGPRPLNPVPQAPL 230 240 250 260 270 280 40 50 60 70 80 90 ek0036 PPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQR :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|194 PPGWEQRVDQHGRVYYVDHIEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQR 290 300 310 320 330 340 100 110 120 130 140 150 ek0036 PTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFATSQSKEFDPLGPLPPGWEKRT ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|194 PTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFATSQNKEFDPLGPLPPGWEKRT 350 360 370 380 390 400 160 170 180 190 200 210 ek0036 DSNGRVYFVNHNTRITQWEYPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYID ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: gi|194 DSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYID 410 420 430 440 450 460 220 230 240 250 260 270 ek0036 PRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSF ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|194 PRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLTMPQHIKITVTRKTLFEDSFQQIMSF 470 480 490 500 510 520 280 290 300 310 320 330 ek0036 SPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPAS 530 540 550 560 570 580 340 350 360 370 380 390 ek0036 YINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSL 590 600 610 620 630 640 400 410 420 430 440 450 ek0036 IWVKENNIEECDLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSR ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|194 IWVKENNIEECGLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSR 650 660 670 680 690 700 460 470 480 490 500 510 ek0036 GVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRHYARTSKQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|194 GVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRHYTRTSKQ 710 720 730 740 750 760 520 530 540 550 560 570 ek0036 IMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 IMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRS 770 780 790 800 810 820 580 590 600 ek0036 HTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE ::::::::::::::::::::::::::::::::::: gi|194 HTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE 830 840 850 860 >>gi|73991667|ref|XP_851460.1| PREDICTED: similar to itc (862 aa) initn: 4209 init1: 4209 opt: 4209 Z-score: 4906.8 bits: 918.5 E(): 0 Smith-Waterman score: 4209; 98.678% identity (99.504% similar) in 605 aa overlap (1-605:258-862) 10 20 30 ek0036 EGATSGLIIPLTISGGSGPRPLNPVTQAPL ::::::::::::::::::::::::: :::: gi|739 SVNGSPSATSESDGSSTGSLPPTNINSNTSEGATSGLIIPLTISGGSGPRPLNPVPQAPL 230 240 250 260 270 280 40 50 60 70 80 90 ek0036 PPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQR :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|739 PPGWEQRVDQHGRVYYVDHIEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQR 290 300 310 320 330 340 100 110 120 130 140 150 ek0036 PTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFATSQSKEFDPLGPLPPGWEKRT ::::::::::::::::::::::::::::::::::::::.:::.::::::::::::::::: gi|739 PTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFTTSQNKEFDPLGPLPPGWEKRT 350 360 370 380 390 400 160 170 180 190 200 210 ek0036 DSNGRVYFVNHNTRITQWEYPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYID ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: gi|739 DSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYID 410 420 430 440 450 460 220 230 240 250 260 270 ek0036 PRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSF 470 480 490 500 510 520 280 290 300 310 320 330 ek0036 SPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPAS .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 NPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPAS 530 540 550 560 570 580 340 350 360 370 380 390 ek0036 YINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSL 590 600 610 620 630 640 400 410 420 430 440 450 ek0036 IWVKENNIEECDLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSR ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|739 IWVKENNIEECGLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSR 650 660 670 680 690 700 460 470 480 490 500 510 ek0036 GVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRHYARTSKQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|739 GVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRHYTRTSKQ 710 720 730 740 750 760 520 530 540 550 560 570 ek0036 IMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 IMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRS 770 780 790 800 810 820 580 590 600 ek0036 HTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE ::::::::::::::::::::::::::::::::::: gi|739 HTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE 830 840 850 860 >>gi|126010776|gb|AAI33504.1| ITCH protein [Bos taurus] (862 aa) initn: 4209 init1: 4209 opt: 4209 Z-score: 4906.8 bits: 918.5 E(): 0 Smith-Waterman score: 4209; 98.512% identity (99.504% similar) in 605 aa overlap (1-605:258-862) 10 20 30 ek0036 EGATSGLIIPLTISGGSGPRPLNPVTQAPL ::::::::::::::::.:::::::. :::: gi|126 SVNGSPSTTSESDGSSTGSLPPTNTNSSTSEGATSGLIIPLTISGGAGPRPLNPIPQAPL 230 240 250 260 270 280 40 50 60 70 80 90 ek0036 PPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQR :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|126 PPGWEQRVDQHGRVYYVDHIEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQR 290 300 310 320 330 340 100 110 120 130 140 150 ek0036 PTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFATSQSKEFDPLGPLPPGWEKRT ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|126 PTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFATSQNKEFDPLGPLPPGWEKRT 350 360 370 380 390 400 160 170 180 190 200 210 ek0036 DSNGRVYFVNHNTRITQWEYPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYID ::::::::::::::::::: ::.::::::::::::::::::::::::::::::::::::: gi|126 DSNGRVYFVNHNTRITQWEDPRNQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYID 410 420 430 440 450 460 220 230 240 250 260 270 ek0036 PRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 PRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSF 470 480 490 500 510 520 280 290 300 310 320 330 ek0036 SPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 SPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPAS 530 540 550 560 570 580 340 350 360 370 380 390 ek0036 YINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 YINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSL 590 600 610 620 630 640 400 410 420 430 440 450 ek0036 IWVKENNIEECDLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSR ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|126 IWVKENNIEECGLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSR 650 660 670 680 690 700 460 470 480 490 500 510 ek0036 GVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRHYARTSKQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|126 GVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRHYTRTSKQ 710 720 730 740 750 760 520 530 540 550 560 570 ek0036 IMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 IMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRS 770 780 790 800 810 820 580 590 600 ek0036 HTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE ::::::::::::::::::::::::::::::::::: gi|126 HTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE 830 840 850 860 >>gi|2827198|gb|AAB99764.1| ubiquitin protein ligase [Mu (854 aa) initn: 4206 init1: 4206 opt: 4206 Z-score: 4903.4 bits: 917.8 E(): 0 Smith-Waterman score: 4206; 98.843% identity (99.504% similar) in 605 aa overlap (1-605:250-854) 10 20 30 ek0036 EGATSGLIIPLTISGGSGPRPLNPVTQAPL ::::::::::::::::::::::: :.:::: gi|282 NGSPSTNSDSDGSSTGSLPPTNTNVNTSTSEGATSGLIIPLTISGGSGPRPLNTVSQAPL 220 230 240 250 260 270 40 50 60 70 80 90 ek0036 PPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 PPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQR 280 290 300 310 320 330 100 110 120 130 140 150 ek0036 PTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFATSQSKEFDPLGPLPPGWEKRT ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|282 PTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFATSQNKEFDPLGPLPPGWEKRT 340 350 360 370 380 390 160 170 180 190 200 210 ek0036 DSNGRVYFVNHNTRITQWEYPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYID ::::::::::::::::::: ::::::::::::::::::::::::::::::::::.::::: gi|282 DSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRATTYID 400 410 420 430 440 450 220 230 240 250 260 270 ek0036 PRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 PRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSF 460 470 480 490 500 510 280 290 300 310 320 330 ek0036 SPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 SPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPAS 520 530 540 550 560 570 340 350 360 370 380 390 ek0036 YINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 YINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSL 580 590 600 610 620 630 400 410 420 430 440 450 ek0036 IWVKENNIEECDLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSR ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|282 IWVKENNIEECGLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSR 640 650 660 670 680 690 460 470 480 490 500 510 ek0036 GVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRHYARTSKQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|282 GVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRHYTRTSKQ 700 710 720 730 740 750 520 530 540 550 560 570 ek0036 IMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 IMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRS 760 770 780 790 800 810 580 590 600 ek0036 HTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE ::::::::::::::::::::::::::::::::::: gi|282 HTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE 820 830 840 850 >>gi|37537881|sp|Q8C863|ITCH_MOUSE E3 ubiquitin-protein (864 aa) initn: 4206 init1: 4206 opt: 4206 Z-score: 4903.3 bits: 917.9 E(): 0 Smith-Waterman score: 4206; 98.843% identity (99.504% similar) in 605 aa overlap (1-605:260-864) 10 20 30 ek0036 EGATSGLIIPLTISGGSGPRPLNPVTQAPL ::::::::::::::::::::::: :.:::: gi|375 NGSPSTNSDSDGSSTGSLPPTNTNVNTSTSEGATSGLIIPLTISGGSGPRPLNTVSQAPL 230 240 250 260 270 280 40 50 60 70 80 90 ek0036 PPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 PPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQR 290 300 310 320 330 340 100 110 120 130 140 150 ek0036 PTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFATSQSKEFDPLGPLPPGWEKRT ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|375 PTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFATSQNKEFDPLGPLPPGWEKRT 350 360 370 380 390 400 160 170 180 190 200 210 ek0036 DSNGRVYFVNHNTRITQWEYPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYID ::::::::::::::::::: ::::::::::::::::::::::::::::::::::.::::: gi|375 DSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRATTYID 410 420 430 440 450 460 220 230 240 250 260 270 ek0036 PRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 PRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSF 470 480 490 500 510 520 280 290 300 310 320 330 ek0036 SPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 SPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPAS 530 540 550 560 570 580 340 350 360 370 380 390 ek0036 YINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 YINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSL 590 600 610 620 630 640 400 410 420 430 440 450 ek0036 IWVKENNIEECDLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSR ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|375 IWVKENNIEECGLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSR 650 660 670 680 690 700 460 470 480 490 500 510 ek0036 GVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRHYARTSKQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|375 GVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRHYTRTSKQ 710 720 730 740 750 760 520 530 540 550 560 570 ek0036 IMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 IMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRS 770 780 790 800 810 820 580 590 600 ek0036 HTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE ::::::::::::::::::::::::::::::::::: gi|375 HTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE 830 840 850 860 605 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sat Aug 9 01:04:26 2008 done: Sat Aug 9 01:06:42 2008 Total Scan time: 910.750 Total Display time: 0.260 Function used was FASTA [version 34.26.5 April 26, 2007]