# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Off03389.fasta.nr -Q ff03389.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ff03389, 838 aa vs /cdna2/lib/nr/nr library 2779448989 residues in 8089198 sequences statistics sampled from 60000 to 8085186 sequences Expectation_n fit: rho(ln(x))= 5.4825+/-0.000188; mu= 12.4896+/- 0.011 mean_var=89.7979+/-17.202, 0's: 36 Z-trim: 52 B-trim: 17 in 2/63 Lambda= 0.135345 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8089198) gi|116242764|sp|Q9NV58.3|RN19A_HUMAN RecName: Full ( 838) 5622 1108.4 0 gi|13366024|dbj|BAB39353.1| ring-IBR-ring domain c ( 838) 5614 1106.8 0 gi|73974100|ref|XP_848454.1| PREDICTED: similar to ( 838) 5526 1089.6 0 gi|194673010|ref|XP_001789408.1| PREDICTED: simila ( 838) 5516 1087.7 0 gi|122138001|sp|Q2VJ60.1|RN19A_PIG RecName: Full=E ( 838) 5500 1084.5 0 gi|73974108|ref|XP_856300.1| PREDICTED: similar to ( 831) 5458 1076.3 0 gi|73974110|ref|XP_856341.1| PREDICTED: similar to ( 839) 5397 1064.4 0 gi|73974114|ref|XP_856427.1| PREDICTED: similar to ( 842) 5377 1060.5 0 gi|73974112|ref|XP_856380.1| PREDICTED: similar to ( 832) 5360 1057.2 0 gi|149721574|ref|XP_001492312.1| PREDICTED: ring f ( 801) 5317 1048.8 0 gi|14917046|sp|P50636.2|RN19A_MOUSE RecName: Full= ( 840) 5304 1046.3 0 gi|74188798|dbj|BAE28125.1| unnamed protein produc ( 840) 5289 1043.3 0 gi|149066523|gb|EDM16396.1| ring finger protein (C ( 840) 5251 1035.9 0 gi|148676876|gb|EDL08823.1| ring finger protein (C ( 823) 5203 1026.5 0 gi|126322520|ref|XP_001380046.1| PREDICTED: simila (1159) 4946 976.5 0 gi|224046571|ref|XP_002200255.1| PREDICTED: simila ( 802) 4893 966.0 0 gi|169642348|gb|AAI60518.1| Rnf19a protein [Xenopu ( 797) 4665 921.5 0 gi|125845169|ref|XP_686250.2| PREDICTED: similar t ( 913) 4092 809.7 0 gi|114621122|ref|XP_001152318.1| PREDICTED: ring f ( 826) 3397 673.9 7.6e-191 gi|73974116|ref|XP_856466.1| PREDICTED: similar to ( 826) 3361 666.9 1e-188 gi|148676877|gb|EDL08824.1| ring finger protein (C ( 560) 3284 651.7 2.5e-184 gi|114621124|ref|XP_001152255.1| PREDICTED: ring f ( 784) 3088 613.6 1.1e-172 gi|118087238|ref|XP_418362.2| PREDICTED: similar t ( 790) 3079 611.8 3.6e-172 gi|73974106|ref|XP_532284.2| PREDICTED: similar to ( 784) 3056 607.3 8.1e-171 gi|149442717|ref|XP_001520758.1| PREDICTED: simila ( 595) 2990 594.3 5e-167 gi|7023254|dbj|BAA91900.1| unnamed protein product ( 457) 2948 586.0 1.2e-164 gi|5101766|emb|CAB45132.1| p38 protein [Homo sapie ( 403) 2583 514.7 3.1e-143 gi|118101728|ref|XP_417816.2| PREDICTED: similar t ( 706) 2569 512.2 3.2e-142 gi|10440099|dbj|BAB15647.1| unnamed protein produc ( 397) 2551 508.4 2.4e-141 gi|550123|emb|CAA50643.1| GEG-154 [Mus musculus] ( 429) 2408 480.5 6.4e-133 gi|160177570|sp|A2A7Q9.2|RN19B_MOUSE RecName: Full ( 732) 2332 465.9 2.8e-128 gi|94372394|ref|XP_915468.2| PREDICTED: similar to ( 746) 2325 464.5 7.3e-128 gi|149253107|ref|XP_204030.6| PREDICTED: IBR domai ( 804) 2325 464.6 7.7e-128 gi|126330471|ref|XP_001381433.1| PREDICTED: simila ( 730) 2319 463.4 1.6e-127 gi|194664358|ref|XP_586804.4| PREDICTED: similar t ( 731) 2313 462.2 3.6e-127 gi|160370005|sp|Q6ZMZ0.2|RN19B_HUMAN RecName: Full ( 732) 2306 460.8 9.4e-127 gi|148698273|gb|EDL30220.1| mCG19022 [Mus musculus ( 652) 2299 459.4 2.2e-126 gi|119627896|gb|EAX07491.1| IBR domain containing ( 731) 2299 459.5 2.4e-126 gi|188219579|ref|NP_001120833.1| ring finger prote ( 587) 2290 457.6 6.9e-126 gi|114555416|ref|XP_524554.2| PREDICTED: hypotheti ( 639) 2240 447.9 6.4e-123 gi|109001743|ref|XP_001099161.1| PREDICTED: IBR do ( 525) 2228 445.5 2.8e-122 gi|47077394|dbj|BAD18585.1| unnamed protein produc ( 486) 2222 444.3 6e-122 gi|114555418|ref|XP_001164659.1| PREDICTED: hypoth ( 486) 2219 443.7 9e-122 gi|38565956|gb|AAH62374.1| RNF19B protein [Homo sa ( 455) 2217 443.3 1.1e-121 gi|117167807|gb|AAI17808.1| Rnf19b protein [Mus mu ( 583) 2148 429.9 1.5e-117 gi|145337976|gb|AAI39809.1| Rnf19b protein [Mus mu ( 513) 2122 424.8 4.7e-116 gi|80477154|gb|AAI08620.1| Rnf19b protein [Xenopus ( 667) 2088 418.2 5.7e-114 gi|120577506|gb|AAI30178.1| Rnf19b protein [Xenopu ( 673) 2088 418.2 5.7e-114 gi|160177571|sp|Q08B84.2|RN19B_XENLA RecName: Full ( 687) 2088 418.2 5.8e-114 gi|115528794|gb|AAI24835.1| Rnf19b protein [Xenopu ( 696) 2088 418.2 5.9e-114 >>gi|116242764|sp|Q9NV58.3|RN19A_HUMAN RecName: Full=E3 (838 aa) initn: 5622 init1: 5622 opt: 5622 Z-score: 5930.6 bits: 1108.4 E(): 0 Smith-Waterman score: 5622; 100.000% identity (100.000% similar) in 838 aa overlap (1-838:1-838) 10 20 30 40 50 60 ff0338 MQEQEIGFISKYNEGLCVNTDPVSILTSILDMSLHRQMGSDRDLQSSASSVSLPSVKKAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 MQEQEIGFISKYNEGLCVNTDPVSILTSILDMSLHRQMGSDRDLQSSASSVSLPSVKKAP 10 20 30 40 50 60 70 80 90 100 110 120 ff0338 KKRRISIGSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 KKRRISIGSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLT 70 80 90 100 110 120 130 140 150 160 170 180 ff0338 SISKQIGDFIECPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 SISKQIGDFIECPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT 130 140 150 160 170 180 190 200 210 220 230 240 ff0338 ERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 ERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLT 190 200 210 220 230 240 250 260 270 280 290 300 ff0338 CGREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 CGREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKP 250 260 270 280 290 300 310 320 330 340 350 360 ff0338 CPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 CPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKK 310 320 330 340 350 360 370 380 390 400 410 420 ff0338 ILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAIAGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 ILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAIAGGV 370 380 390 400 410 420 430 440 450 460 470 480 ff0338 TLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 TLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENDI 430 440 450 460 470 480 490 500 510 520 530 540 ff0338 NVGGTNTAVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETASTMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 NVGGTNTAVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETASTMA 490 500 510 520 530 540 550 560 570 580 590 600 ff0338 LAGASITGSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAMAGSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 LAGASITGSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAMAGSI 550 560 570 580 590 600 610 620 630 640 650 660 ff0338 LNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVDDGSATRSHAGGSSSGLPEGKSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 LNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVDDGSATRSHAGGSSSGLPEGKSSA 610 620 630 640 650 660 670 680 690 700 710 720 ff0338 TKWSKEATAGKKSKSGKLRKKGNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDSMPSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 TKWSKEATAGKKSKSGKLRKKGNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDSMPSV 670 680 690 700 710 720 730 740 750 760 770 780 ff0338 ADSHSSHFSEFSCSDLESMKTSCSHGSSDYHTRFATVNILPEVENDRLENSPHQCSISVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 ADSHSSHFSEFSCSDLESMKTSCSHGSSDYHTRFATVNILPEVENDRLENSPHQCSISVV 730 740 750 760 770 780 790 800 810 820 830 ff0338 TQTASCSEVSQLNHIAEEHGNNGIKPNVDLYFGDALKETNNNHSHQTMELKVAIQTEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 TQTASCSEVSQLNHIAEEHGNNGIKPNVDLYFGDALKETNNNHSHQTMELKVAIQTEI 790 800 810 820 830 >>gi|13366024|dbj|BAB39353.1| ring-IBR-ring domain conta (838 aa) initn: 5614 init1: 5614 opt: 5614 Z-score: 5922.2 bits: 1106.8 E(): 0 Smith-Waterman score: 5614; 99.881% identity (100.000% similar) in 838 aa overlap (1-838:1-838) 10 20 30 40 50 60 ff0338 MQEQEIGFISKYNEGLCVNTDPVSILTSILDMSLHRQMGSDRDLQSSASSVSLPSVKKAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 MQEQEIGFISKYNEGLCVNTDPVSILTSILDMSLHRQMGSDRDLQSSASSVSLPSVKKAP 10 20 30 40 50 60 70 80 90 100 110 120 ff0338 KKRRISIGSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 KKRRISIGSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLT 70 80 90 100 110 120 130 140 150 160 170 180 ff0338 SISKQIGDFIECPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 SISKQIGDFIECPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT 130 140 150 160 170 180 190 200 210 220 230 240 ff0338 ERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 ERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLT 190 200 210 220 230 240 250 260 270 280 290 300 ff0338 CGREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 CGREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKP 250 260 270 280 290 300 310 320 330 340 350 360 ff0338 CPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 CPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKK 310 320 330 340 350 360 370 380 390 400 410 420 ff0338 ILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAIAGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 ILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAIAGGV 370 380 390 400 410 420 430 440 450 460 470 480 ff0338 TLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 TLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENDI 430 440 450 460 470 480 490 500 510 520 530 540 ff0338 NVGGTNTAVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETASTMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 NVGGTNTAVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETASTMA 490 500 510 520 530 540 550 560 570 580 590 600 ff0338 LAGASITGSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAMAGSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 LAGASITGSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAMAGSI 550 560 570 580 590 600 610 620 630 640 650 660 ff0338 LNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVDDGSATRSHAGGSSSGLPEGKSSA ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|133 LNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVDDGSATRSYAGGSSSGLPEGKSSA 610 620 630 640 650 660 670 680 690 700 710 720 ff0338 TKWSKEATAGKKSKSGKLRKKGNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDSMPSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 TKWSKEATAGKKSKSGKLRKKGNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDSMPSV 670 680 690 700 710 720 730 740 750 760 770 780 ff0338 ADSHSSHFSEFSCSDLESMKTSCSHGSSDYHTRFATVNILPEVENDRLENSPHQCSISVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 ADSHSSHFSEFSCSDLESMKTSCSHGSSDYHTRFATVNILPEVENDRLENSPHQCSISVV 730 740 750 760 770 780 790 800 810 820 830 ff0338 TQTASCSEVSQLNHIAEEHGNNGIKPNVDLYFGDALKETNNNHSHQTMELKVAIQTEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 TQTASCSEVSQLNHIAEEHGNNGIKPNVDLYFGDALKETNNNHSHQTMELKVAIQTEI 790 800 810 820 830 >>gi|73974100|ref|XP_848454.1| PREDICTED: similar to rin (838 aa) initn: 5526 init1: 5526 opt: 5526 Z-score: 5829.3 bits: 1089.6 E(): 0 Smith-Waterman score: 5526; 97.852% identity (99.403% similar) in 838 aa overlap (1-838:1-838) 10 20 30 40 50 60 ff0338 MQEQEIGFISKYNEGLCVNTDPVSILTSILDMSLHRQMGSDRDLQSSASSVSLPSVKKAP :::::::::::::::::.:::: ::: ::::::::::::::::::::::::::::::::: gi|739 MQEQEIGFISKYNEGLCINTDPDSILMSILDMSLHRQMGSDRDLQSSASSVSLPSVKKAP 10 20 30 40 50 60 70 80 90 100 110 120 ff0338 KKRRISIGSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KKRRISIGSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLT 70 80 90 100 110 120 130 140 150 160 170 180 ff0338 SISKQIGDFIECPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|739 SISKQIGDFIECPLCLLRHSKDRFPEIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT 130 140 150 160 170 180 190 200 210 220 230 240 ff0338 ERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLT 190 200 210 220 230 240 250 260 270 280 290 300 ff0338 CGREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 CGREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKP 250 260 270 280 290 300 310 320 330 340 350 360 ff0338 CPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 CPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKK 310 320 330 340 350 360 370 380 390 400 410 420 ff0338 ILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAIAGGV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|739 ILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAITGGV 370 380 390 400 410 420 430 440 450 460 470 480 ff0338 TLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENDI 430 440 450 460 470 480 490 500 510 520 530 540 ff0338 NVGGTNTAVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETASTMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 NVGGTNTAVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETASTMA 490 500 510 520 530 540 550 560 570 580 590 600 ff0338 LAGASITGSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAMAGSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LAGASITGSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAMAGSI 550 560 570 580 590 600 610 620 630 640 650 660 ff0338 LNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVDDGSATRSHAGGSSSGLPEGKSSA ::::::::::::::::::::::::::::::::::::.:::::::: ::::::.:::: .: gi|739 LNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVEDGSATRSHPGGSSSGFPEGKVGA 610 620 630 640 650 660 670 680 690 700 710 720 ff0338 TKWSKEATAGKKSKSGKLRKKGNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDSMPSV ::::::::::::.::::::::.:::::::::::::::::::::::::::::::::::::: gi|739 TKWSKEATAGKKAKSGKLRKKSNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDSMPSV 670 680 690 700 710 720 730 740 750 760 770 780 ff0338 ADSHSSHFSEFSCSDLESMKTSCSHGSSDYHTRFATVNILPEVENDRLENSPHQCSISVV :::::::::::::::::::::::::::.:::.:::::::::::::::::::::::::::. gi|739 ADSHSSHFSEFSCSDLESMKTSCSHGSNDYHARFATVNILPEVENDRLENSPHQCSISVL 730 740 750 760 770 780 790 800 810 820 830 ff0338 TQTASCSEVSQLNHIAEEHGNNGIKPNVDLYFGDALKETNNNHSHQTMELKVAIQTEI :.::::::: ::::::::::::::::::::::::.::::::::::::::::::::::: gi|739 TKTASCSEVPQLNHIAEEHGNNGIKPNVDLYFGDVLKETNNNHSHQTMELKVAIQTEI 790 800 810 820 830 >>gi|194673010|ref|XP_001789408.1| PREDICTED: similar to (838 aa) initn: 5610 init1: 5516 opt: 5516 Z-score: 5818.8 bits: 1087.7 E(): 0 Smith-Waterman score: 5516; 97.852% identity (99.284% similar) in 838 aa overlap (1-838:1-838) 10 20 30 40 50 60 ff0338 MQEQEIGFISKYNEGLCVNTDPVSILTSILDMSLHRQMGSDRDLQSSASSVSLPSVKKAP :::::: :: :::::::::::: ::: ::::::::::::::::::::::::::::::::: gi|194 MQEQEIDFIFKYNEGLCVNTDPDSILMSILDMSLHRQMGSDRDLQSSASSVSLPSVKKAP 10 20 30 40 50 60 70 80 90 100 110 120 ff0338 KKRRISIGSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KKRRISIGSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLT 70 80 90 100 110 120 130 140 150 160 170 180 ff0338 SISKQIGDFIECPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT :::::.:::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|194 SISKQVGDFIECPLCLLRHSKDRFPEIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT 130 140 150 160 170 180 190 200 210 220 230 240 ff0338 ERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLT 190 200 210 220 230 240 250 260 270 280 290 300 ff0338 CGREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 CGREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKP 250 260 270 280 290 300 310 320 330 340 350 360 ff0338 CPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 CPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKK 310 320 330 340 350 360 370 380 390 400 410 420 ff0338 ILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAIAGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAIAGGV 370 380 390 400 410 420 430 440 450 460 470 480 ff0338 TLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENDI 430 440 450 460 470 480 490 500 510 520 530 540 ff0338 NVGGTNTAVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETASTMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NVGGTNTAVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETASTMA 490 500 510 520 530 540 550 560 570 580 590 600 ff0338 LAGASITGSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAMAGSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LAGASITGSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAMAGSI 550 560 570 580 590 600 610 620 630 640 650 660 ff0338 LNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVDDGSATRSHAGGSSSGLPEGKSSA ::::::::::::::::::::::::::::::::::::.:::::::: ::::.::::::::: gi|194 LNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVEDGSATRSHPGGSSGGLPEGKSSA 610 620 630 640 650 660 670 680 690 700 710 720 ff0338 TKWSKEATAGKKSKSGKLRKKGNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDSMPSV :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|194 TKWSKEATAGKKSKSGKLRKKSNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDSMPSV 670 680 690 700 710 720 730 740 750 760 770 780 ff0338 ADSHSSHFSEFSCSDLESMKTSCSHGSSDYHTRFATVNILPEVENDRLENSPHQCSISVV :::::::::::::::::::::::::::.:::.:::::::::::::::::::::::::::. gi|194 ADSHSSHFSEFSCSDLESMKTSCSHGSTDYHARFATVNILPEVENDRLENSPHQCSISVL 730 740 750 760 770 780 790 800 810 820 830 ff0338 TQTASCSEVSQLNHIAEEHGNNGIKPNVDLYFGDALKETNNNHSHQTMELKVAIQTEI ::::::::: :::::::::::.::::.::::::.::::::::::::::::::::::.: gi|194 TQTASCSEVPQLNHIAEEHGNSGIKPSVDLYFGSALKETNNNHSHQTMELKVAIQTDI 790 800 810 820 830 >>gi|122138001|sp|Q2VJ60.1|RN19A_PIG RecName: Full=E3 ub (838 aa) initn: 5569 init1: 5500 opt: 5500 Z-score: 5801.9 bits: 1084.5 E(): 0 Smith-Waterman score: 5500; 97.375% identity (99.284% similar) in 838 aa overlap (1-838:1-838) 10 20 30 40 50 60 ff0338 MQEQEIGFISKYNEGLCVNTDPVSILTSILDMSLHRQMGSDRDLQSSASSVSLPSVKKAP :::::::..::::::::.:::: ::: ::::::::::::::::::::::::::::::::: gi|122 MQEQEIGLLSKYNEGLCINTDPNSILMSILDMSLHRQMGSDRDLQSSASSVSLPSVKKAP 10 20 30 40 50 60 70 80 90 100 110 120 ff0338 KKRRISIGSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLT :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|122 KKRRISIGSLFRRKKENKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLT 70 80 90 100 110 120 130 140 150 160 170 180 ff0338 SISKQIGDFIECPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|122 SISKQIGDFIECPLCLLRHSKDRFPEIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT 130 140 150 160 170 180 190 200 210 220 230 240 ff0338 ERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 ERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLT 190 200 210 220 230 240 250 260 270 280 290 300 ff0338 CGREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 CGREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKP 250 260 270 280 290 300 310 320 330 340 350 360 ff0338 CPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 CPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKK 310 320 330 340 350 360 370 380 390 400 410 420 ff0338 ILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAIAGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 ILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAIAGGV 370 380 390 400 410 420 430 440 450 460 470 480 ff0338 TLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 TLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENDI 430 440 450 460 470 480 490 500 510 520 530 540 ff0338 NVGGTNTAVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETASTMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 NVGGTNTAVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETASTMA 490 500 510 520 530 540 550 560 570 580 590 600 ff0338 LAGASITGSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAMAGSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 LAGASITGSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAMAGSI 550 560 570 580 590 600 610 620 630 640 650 660 ff0338 LNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVDDGSATRSHAGGSSSGLPEGKSSA :::::::::::::::::::::::::::::::::::::::::.::: :: :.::::::::: gi|122 LNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVDDGSAARSHPGGLSGGLPEGKSSA 610 620 630 640 650 660 670 680 690 700 710 720 ff0338 TKWSKEATAGKKSKSGKLRKKGNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDSMPSV :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|122 TKWSKEATAGKKSKSGKLRKKSNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDSMPSV 670 680 690 700 710 720 730 740 750 760 770 780 ff0338 ADSHSSHFSEFSCSDLESMKTSCSHGSSDYHTRFATVNILPEVENDRLENSPHQCSISVV :::::::::::::::::::::::::::.:::.:::::::::::::::::::::::::::. gi|122 ADSHSSHFSEFSCSDLESMKTSCSHGSTDYHARFATVNILPEVENDRLENSPHQCSISVL 730 740 750 760 770 780 790 800 810 820 830 ff0338 TQTASCSEVSQLNHIAEEHGNNGIKPNVDLYFGDALKETNNNHSHQTMELKVAIQTEI :.:::::: :::::::::.::::.::::::::.::::::::::::::::::::::.: gi|122 TKTASCSEDPQLNHIAEEHSNNGIRPNVDLYFGNALKETNNNHSHQTMELKVAIQTDI 790 800 810 820 830 >>gi|73974108|ref|XP_856300.1| PREDICTED: similar to rin (831 aa) initn: 3505 init1: 3505 opt: 5458 Z-score: 5757.6 bits: 1076.3 E(): 0 Smith-Waterman score: 5458; 96.897% identity (98.568% similar) in 838 aa overlap (1-838:1-831) 10 20 30 40 50 60 ff0338 MQEQEIGFISKYNEGLCVNTDPVSILTSILDMSLHRQMGSDRDLQSSASSVSLPSVKKAP :::::::::::::::::.:::: ::: ::::::::::::::::::::::::::::::::: gi|739 MQEQEIGFISKYNEGLCINTDPDSILMSILDMSLHRQMGSDRDLQSSASSVSLPSVKKAP 10 20 30 40 50 60 70 80 90 100 110 120 ff0338 KKRRISIGSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KKRRISIGSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLT 70 80 90 100 110 120 130 140 150 160 170 180 ff0338 SISKQIGDFIECPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|739 SISKQIGDFIECPLCLLRHSKDRFPEIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT 130 140 150 160 170 180 190 200 210 220 230 240 ff0338 ERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLT 190 200 210 220 230 240 250 260 270 280 290 300 ff0338 CGREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKP :::::::::::::::::::::::::::::::::::::::::::::::. ::::: gi|739 CGREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYT-------DDIKP 250 260 270 280 290 310 320 330 340 350 360 ff0338 CPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 CPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKK 300 310 320 330 340 350 370 380 390 400 410 420 ff0338 ILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAIAGGV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|739 ILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAITGGV 360 370 380 390 400 410 430 440 450 460 470 480 ff0338 TLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENDI 420 430 440 450 460 470 490 500 510 520 530 540 ff0338 NVGGTNTAVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETASTMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 NVGGTNTAVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETASTMA 480 490 500 510 520 530 550 560 570 580 590 600 ff0338 LAGASITGSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAMAGSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LAGASITGSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAMAGSI 540 550 560 570 580 590 610 620 630 640 650 660 ff0338 LNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVDDGSATRSHAGGSSSGLPEGKSSA ::::::::::::::::::::::::::::::::::::.:::::::: ::::::.:::: .: gi|739 LNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVEDGSATRSHPGGSSSGFPEGKVGA 600 610 620 630 640 650 670 680 690 700 710 720 ff0338 TKWSKEATAGKKSKSGKLRKKGNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDSMPSV ::::::::::::.::::::::.:::::::::::::::::::::::::::::::::::::: gi|739 TKWSKEATAGKKAKSGKLRKKSNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDSMPSV 660 670 680 690 700 710 730 740 750 760 770 780 ff0338 ADSHSSHFSEFSCSDLESMKTSCSHGSSDYHTRFATVNILPEVENDRLENSPHQCSISVV :::::::::::::::::::::::::::.:::.:::::::::::::::::::::::::::. gi|739 ADSHSSHFSEFSCSDLESMKTSCSHGSNDYHARFATVNILPEVENDRLENSPHQCSISVL 720 730 740 750 760 770 790 800 810 820 830 ff0338 TQTASCSEVSQLNHIAEEHGNNGIKPNVDLYFGDALKETNNNHSHQTMELKVAIQTEI :.::::::: ::::::::::::::::::::::::.::::::::::::::::::::::: gi|739 TKTASCSEVPQLNHIAEEHGNNGIKPNVDLYFGDVLKETNNNHSHQTMELKVAIQTEI 780 790 800 810 820 830 >>gi|73974110|ref|XP_856341.1| PREDICTED: similar to rin (839 aa) initn: 5400 init1: 3507 opt: 5397 Z-score: 5693.2 bits: 1064.4 E(): 0 Smith-Waterman score: 5397; 95.590% identity (98.093% similar) in 839 aa overlap (1-838:1-839) 10 20 30 40 50 60 ff0338 MQEQEIGFISKYNEGLCVNTDPVSILTSILDMSLHRQMGSDRDLQSSASSVSLPSVKKAP :::::::::::::::::.:::: ::: ::::::::::::::::::::::::::::::::: gi|739 MQEQEIGFISKYNEGLCINTDPDSILMSILDMSLHRQMGSDRDLQSSASSVSLPSVKKAP 10 20 30 40 50 60 70 80 90 100 110 120 ff0338 KKRRISIGSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KKRRISIGSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLT 70 80 90 100 110 120 130 140 150 160 170 180 ff0338 SISKQIGDFIECPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|739 SISKQIGDFIECPLCLLRHSKDRFPEIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT 130 140 150 160 170 180 190 200 210 220 230 240 ff0338 ERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLT 190 200 210 220 230 240 250 260 270 280 290 ff0338 CGREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLRLRT-IRSSSISYSQESGAAADDIK :::::::::::::::::::::::::::::::::::. . : .... : ..:::: gi|739 CGREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLQDSNGIGTKKLHVVWSSPRGSDDIK 250 260 270 280 290 300 300 310 320 330 340 350 ff0338 PCPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PCPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKK 310 320 330 340 350 360 360 370 380 390 400 410 ff0338 KILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAIAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|739 KILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAITGG 370 380 390 400 410 420 420 430 440 450 460 470 ff0338 VTLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDEND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VTLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDEND 430 440 450 460 470 480 480 490 500 510 520 530 ff0338 INVGGTNTAVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETASTM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 INVGGTNTAVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETASTM 490 500 510 520 530 540 540 550 560 570 580 590 ff0338 ALAGASITGSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAMAGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ALAGASITGSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAMAGS 550 560 570 580 590 600 600 610 620 630 640 650 ff0338 ILNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVDDGSATRSHAGGSSSGLPEGKSS :::::::::::::::::::::::::::::::::::::.:::::::: ::::::.:::: . gi|739 ILNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVEDGSATRSHPGGSSSGFPEGKVG 610 620 630 640 650 660 660 670 680 690 700 710 ff0338 ATKWSKEATAGKKSKSGKLRKKGNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDSMPS :::::::::::::.::::::::.::::::::::::::::::::::::::::::::::::: gi|739 ATKWSKEATAGKKAKSGKLRKKSNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDSMPS 670 680 690 700 710 720 720 730 740 750 760 770 ff0338 VADSHSSHFSEFSCSDLESMKTSCSHGSSDYHTRFATVNILPEVENDRLENSPHQCSISV ::::::::::::::::::::::::::::.:::.::::::::::::::::::::::::::: gi|739 VADSHSSHFSEFSCSDLESMKTSCSHGSNDYHARFATVNILPEVENDRLENSPHQCSISV 730 740 750 760 770 780 780 790 800 810 820 830 ff0338 VTQTASCSEVSQLNHIAEEHGNNGIKPNVDLYFGDALKETNNNHSHQTMELKVAIQTEI .:.::::::: ::::::::::::::::::::::::.::::::::::::::::::::::: gi|739 LTKTASCSEVPQLNHIAEEHGNNGIKPNVDLYFGDVLKETNNNHSHQTMELKVAIQTEI 790 800 810 820 830 >>gi|73974114|ref|XP_856427.1| PREDICTED: similar to rin (842 aa) initn: 5382 init1: 3512 opt: 5377 Z-score: 5672.1 bits: 1060.5 E(): 0 Smith-Waterman score: 5377; 95.012% identity (97.387% similar) in 842 aa overlap (1-838:1-842) 10 20 30 40 50 60 ff0338 MQEQEIGFISKYNEGLCVNTDPVSILTSILDMSLHRQMGSDRDLQSSASSVSLPSVKKAP :::::::::::::::::.:::: ::: ::::::::::::::::::::::::::::::::: gi|739 MQEQEIGFISKYNEGLCINTDPDSILMSILDMSLHRQMGSDRDLQSSASSVSLPSVKKAP 10 20 30 40 50 60 70 80 90 100 110 120 ff0338 KKRRISIGSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KKRRISIGSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLT 70 80 90 100 110 120 130 140 150 160 170 180 ff0338 SISKQIGDFIECPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|739 SISKQIGDFIECPLCLLRHSKDRFPEIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT 130 140 150 160 170 180 190 200 210 220 230 240 ff0338 ERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLT 190 200 210 220 230 240 250 260 270 280 290 ff0338 CGREGCGTEFCYHCKQIWHPNQTCDAARQERAQS----LRLRTIRSSSISYSQESGAAAD ::::::::::::::::::::::::::::::: .. . . .:. :::. : gi|739 CGREGCGTEFCYHCKQIWHPNQTCDAARQERKRKGNGKVFKQILRTVYNSYSMSVILKPD 250 260 270 280 290 300 300 310 320 330 340 350 ff0338 DIKPCPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 DIKPCPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWS 310 320 330 340 350 360 360 370 380 390 400 410 ff0338 RKKKILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RKKKILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAI 370 380 390 400 410 420 420 430 440 450 460 470 ff0338 AGGVTLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDD .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TGGVTLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDD 430 440 450 460 470 480 480 490 500 510 520 530 ff0338 ENDINVGGTNTAVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ENDINVGGTNTAVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETA 490 500 510 520 530 540 540 550 560 570 580 590 ff0338 STMALAGASITGSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 STMALAGASITGSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAM 550 560 570 580 590 600 600 610 620 630 640 650 ff0338 AGSILNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVDDGSATRSHAGGSSSGLPEG ::::::::::::::::::::::::::::::::::::::::.:::::::: ::::::.::: gi|739 AGSILNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVEDGSATRSHPGGSSSGFPEG 610 620 630 640 650 660 660 670 680 690 700 710 ff0338 KSSATKWSKEATAGKKSKSGKLRKKGNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDS : .:::::::::::::.::::::::.:::::::::::::::::::::::::::::::::: gi|739 KVGATKWSKEATAGKKAKSGKLRKKSNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDS 670 680 690 700 710 720 720 730 740 750 760 770 ff0338 MPSVADSHSSHFSEFSCSDLESMKTSCSHGSSDYHTRFATVNILPEVENDRLENSPHQCS :::::::::::::::::::::::::::::::.:::.:::::::::::::::::::::::: gi|739 MPSVADSHSSHFSEFSCSDLESMKTSCSHGSNDYHARFATVNILPEVENDRLENSPHQCS 730 740 750 760 770 780 780 790 800 810 820 830 ff0338 ISVVTQTASCSEVSQLNHIAEEHGNNGIKPNVDLYFGDALKETNNNHSHQTMELKVAIQT :::.:.::::::: ::::::::::::::::::::::::.::::::::::::::::::::: gi|739 ISVLTKTASCSEVPQLNHIAEEHGNNGIKPNVDLYFGDVLKETNNNHSHQTMELKVAIQT 790 800 810 820 830 840 ff0338 EI :: gi|739 EI >>gi|73974112|ref|XP_856380.1| PREDICTED: similar to rin (832 aa) initn: 5378 init1: 3506 opt: 5360 Z-score: 5654.2 bits: 1057.2 E(): 0 Smith-Waterman score: 5360; 95.107% identity (97.494% similar) in 838 aa overlap (1-838:1-832) 10 20 30 40 50 60 ff0338 MQEQEIGFISKYNEGLCVNTDPVSILTSILDMSLHRQMGSDRDLQSSASSVSLPSVKKAP :::::::::::::::::.:::: ::: ::::::::::::::::::::::::::::::::: gi|739 MQEQEIGFISKYNEGLCINTDPDSILMSILDMSLHRQMGSDRDLQSSASSVSLPSVKKAP 10 20 30 40 50 60 70 80 90 100 110 120 ff0338 KKRRISIGSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KKRRISIGSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLT 70 80 90 100 110 120 130 140 150 160 170 180 ff0338 SISKQIGDFIECPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|739 SISKQIGDFIECPLCLLRHSKDRFPEIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT 130 140 150 160 170 180 190 200 210 220 230 240 ff0338 ERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLT 190 200 210 220 230 240 250 260 270 280 290 300 ff0338 CGREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKP ::::::::::::::::::::::::::::::: : ..... . .::::: gi|739 CGREGCGTEFCYHCKQIWHPNQTCDAARQERQAPC-----REPDVGFDPGT-RHSDDIKP 250 260 270 280 290 310 320 330 340 350 360 ff0338 CPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 CPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKK 300 310 320 330 340 350 370 380 390 400 410 420 ff0338 ILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAIAGGV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|739 ILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAITGGV 360 370 380 390 400 410 430 440 450 460 470 480 ff0338 TLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENDI 420 430 440 450 460 470 490 500 510 520 530 540 ff0338 NVGGTNTAVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETASTMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 NVGGTNTAVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETASTMA 480 490 500 510 520 530 550 560 570 580 590 600 ff0338 LAGASITGSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAMAGSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LAGASITGSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAMAGSI 540 550 560 570 580 590 610 620 630 640 650 660 ff0338 LNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVDDGSATRSHAGGSSSGLPEGKSSA ::::::::::::::::::::::::::::::::::::.:::::::: ::::::.:::: .: gi|739 LNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVEDGSATRSHPGGSSSGFPEGKVGA 600 610 620 630 640 650 670 680 690 700 710 720 ff0338 TKWSKEATAGKKSKSGKLRKKGNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDSMPSV ::::::::::::.::::::::.:::::::::::::::::::::::::::::::::::::: gi|739 TKWSKEATAGKKAKSGKLRKKSNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDSMPSV 660 670 680 690 700 710 730 740 750 760 770 780 ff0338 ADSHSSHFSEFSCSDLESMKTSCSHGSSDYHTRFATVNILPEVENDRLENSPHQCSISVV :::::::::::::::::::::::::::.:::.:::::::::::::::::::::::::::. gi|739 ADSHSSHFSEFSCSDLESMKTSCSHGSNDYHARFATVNILPEVENDRLENSPHQCSISVL 720 730 740 750 760 770 790 800 810 820 830 ff0338 TQTASCSEVSQLNHIAEEHGNNGIKPNVDLYFGDALKETNNNHSHQTMELKVAIQTEI :.::::::: ::::::::::::::::::::::::.::::::::::::::::::::::: gi|739 TKTASCSEVPQLNHIAEEHGNNGIKPNVDLYFGDVLKETNNNHSHQTMELKVAIQTEI 780 790 800 810 820 830 >>gi|149721574|ref|XP_001492312.1| PREDICTED: ring finge (801 aa) initn: 5317 init1: 5317 opt: 5317 Z-score: 5609.1 bits: 1048.8 E(): 0 Smith-Waterman score: 5317; 98.502% identity (99.750% similar) in 801 aa overlap (38-838:1-801) 10 20 30 40 50 60 ff0338 FISKYNEGLCVNTDPVSILTSILDMSLHRQMGSDRDLQSSASSVSLPSVKKAPKKRRISI :::::::::::::::::::::::::::::: gi|149 MGSDRDLQSSASSVSLPSVKKAPKKRRISI 10 20 30 70 80 90 100 110 120 ff0338 GSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLTSISKQIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFSTNTSSDNGLTSISKQIG 40 50 60 70 80 90 130 140 150 160 170 180 ff0338 DFIECPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPECTERFNPHD ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|149 DFIECPLCLLRHSKDRFPEIMTCHHRSCVDCLRQYLRIEISESRVNISCPECTERFNPHD 100 110 120 130 140 150 190 200 210 220 230 240 ff0338 IRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLTCGREGCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLTCGREGCG 160 170 180 190 200 210 250 260 270 280 290 300 ff0338 TEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKPCPRCAAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKPCPRCAAY 220 230 240 250 260 270 310 320 330 340 350 360 ff0338 IIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKKILWQLGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKKILWQLGT 280 290 300 310 320 330 370 380 390 400 410 420 ff0338 LVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAIAGGVTLSVIVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAIAGGVTLSVIVS 340 350 360 370 380 390 430 440 450 460 470 480 ff0338 PVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENDINVGGTNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENDINVGGTNT 400 410 420 430 440 450 490 500 510 520 530 540 ff0338 AVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETASTMALAGASIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AVDTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETASTMALAGASIT 460 470 480 490 500 510 550 560 570 580 590 600 ff0338 GSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAMAGSILNSYIPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GSLSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAMAGSILNSYIPL 520 530 540 550 560 570 610 620 630 640 650 660 ff0338 DKEGNSMEVQVDIESKPSKFRHNSGSSSVDDGSATRSHAGGSSSGLPEGKSSATKWSKEA ::::::::::::::::::::::::::::::::::::::.::.:.:::::::::::::::: gi|149 DKEGNSMEVQVDIESKPSKFRHNSGSSSVDDGSATRSHTGGASTGLPEGKSSATKWSKEA 580 590 600 610 620 630 670 680 690 700 710 720 ff0338 TAGKKSKSGKLRKKGNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDSMPSVADSHSSH ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|149 TAGKKSKSGKLRKKSNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDSMPSVADSHSSH 640 650 660 670 680 690 730 740 750 760 770 780 ff0338 FSEFSCSDLESMKTSCSHGSSDYHTRFATVNILPEVENDRLENSPHQCSISVVTQTASCS ::::::::::::::::::::.:::.:::::::::::::::::::::::::::.:.::::: gi|149 FSEFSCSDLESMKTSCSHGSNDYHARFATVNILPEVENDRLENSPHQCSISVLTKTASCS 700 710 720 730 740 750 790 800 810 820 830 ff0338 EVSQLNHIAEEHGNNGIKPNVDLYFGDALKETNNNHSHQTMELKVAIQTEI :: :::::::::::::::::::::::.::::::::::::: :::::::::: gi|149 EVPQLNHIAEEHGNNGIKPNVDLYFGEALKETNNNHSHQTTELKVAIQTEI 760 770 780 790 800 838 residues in 1 query sequences 2779448989 residues in 8089198 library sequences Tcomplib [34.26] (8 proc) start: Thu Apr 16 13:28:07 2009 done: Thu Apr 16 13:30:28 2009 Total Scan time: 1209.010 Total Display time: 0.440 Function used was FASTA [version 34.26.5 April 26, 2007]