hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-03093870/chunk_1/iprscan-20080809-03093870.nocrc
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Query sequence: ff03515
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00506                                                 110.2    2.4e-28   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00506     1/1      16   150 ..     1   156 []   110.2  2.4e-28

Alignments of top-scoring domains:
SM00506: domain 1 of 1, from 16 to 150: score 110.2, E = 2.4e-28
                   *->ilkvvkGDItklr...adaIVNAANsrllhGgGgvagAiaraaggpc
                       l +++  I++l + +++aI N++N +  ++   ++ ++ +++g   
     ff03515    16    QLNLIHSEISNLAgfeVEAIINPTNADIDLKDD-LGNTLEKKGG--- 58   

                   weeekeefrkqaggepLqlgecpvGtavvteggnlpentkrgkakyVIHa
                    +e+ e++ +++++    +g  +v+ a v+ g++l       +ak+VIH+
     ff03515    59 -KEFVEAVLELRKK----NGPLEVAGAAVSAGHGL-------PAKFVIHC 96   

                   vGPeasgynnkkgseegdellenAyranclrlaeelgiksvaiPlIstGi
                     P+++       +  ++elle+ +++ cl+la+++++ks+a+P I++G 
     ff03515    97 NSPVWG-------ADKCEELLEKTVKN-CLALADDKKLKSIAFPSIGSGR 138  

                   ygvpkdrvaqal<-*
                    g+pk ++aq++   
     ff03515   139 NGFPKQTAAQLI    150  

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