hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090525/iprscan-20090525-13585898/chunk_1/iprscan-20090525-13585898.nocrc
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Query sequence: ff05119
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                 387.1     1e-111  14
SM00349                                                 122.4    4.9e-32   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00349      1/1     100   160 ..     1    62 []   122.4  4.9e-32
SM00355      1/14    290   312 ..     1    23 []    31.5  0.00011
SM00355      2/14    318   340 ..     1    23 []    26.9   0.0029
SM00355      3/14    346   368 ..     1    23 []    30.4  0.00025
SM00355      4/14    374   396 ..     1    23 []    27.2   0.0022
SM00355      5/14    402   424 ..     1    23 []    26.2   0.0046
SM00355      6/14    430   452 ..     1    23 []    24.5    0.015
SM00355      7/14    458   480 ..     1    23 []    25.3   0.0086
SM00355      8/14    486   508 ..     1    23 []    28.8  0.00077
SM00355      9/14    514   536 ..     1    23 []    32.2  7.3e-05
SM00355     10/14    542   564 ..     1    23 []    26.0   0.0052
SM00355     11/14    570   592 ..     1    23 []    25.2   0.0092
SM00355     12/14    598   620 ..     1    23 []    28.7  0.00082
SM00355     13/14    626   648 ..     1    23 []    28.3   0.0011
SM00355     14/14    654   676 ..     1    23 []    26.2   0.0045

Alignments of top-scoring domains:
SM00349: domain 1 of 1, from 100 to 160: score 122.4, E = 4.9e-32
                   *->VtFeDVAVdFsqEEWeqLDpaQrnLYRdVMlENYsnLvSLGgfqvsk
                      V+FeDV V+F+ EEW++LD aQr+LY++VMlE+++ LvSLG ++v+k
     ff05119   100    VSFEDVVVTFTGEEWGHLDLAQRTLYQEVMLETCRLLVSLG-HPVPK 145  

                   pdliskLEqgeEpwi<-*
                   p+li +LE g+E+w+   
     ff05119   146 PELIYLLEHGQELWT    160  

SM00355: domain 1 of 14, from 290 to 312: score 31.5, E = 0.00011
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk fs k aL+rH+++H   
     ff05119   290    YTCTE-CGKGFSKKwALVRHQQIH    312  

SM00355: domain 2 of 14, from 318 to 340: score 26.9, E = 0.0029
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk ++   + +rHmr H   
     ff05119   318    YECNE-CGKACRYMaDVIRHMRLH    340  

SM00355: domain 3 of 14, from 346 to 368: score 30.4, E = 0.00025
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC + Cgk f+++ +L++H+r+H   
     ff05119   346    YKCIE-CGKAFKRRfHLTEHQRIH    368  

SM00355: domain 4 of 14, from 374 to 396: score 27.2, E = 0.0022
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk f++++++++H ++H   
     ff05119   374    YECKE-CGKAFTHRsSFIQHNMTH    396  

SM00355: domain 5 of 14, from 402 to 424: score 26.2, E = 0.0046
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      + C++ Cgk f   +++ +Hmr+H   
     ff05119   402    FLCKE-CGKAFYYSsSFAQHMRIH    424  

SM00355: domain 6 of 14, from 430 to 452: score 24.5, E = 0.015
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C + Cgk f++++ +++H  +H   
     ff05119   430    YECGE-CGKAFTHRsTFIQHNVTH    452  

SM00355: domain 7 of 14, from 458 to 480: score 25.3, E = 0.0086
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      + C++ Cgk+f+  +++++Hmr+H   
     ff05119   458    FLCKE-CGKTFCLNsSFTQHMRIH    480  

SM00355: domain 8 of 14, from 486 to 508: score 28.8, E = 0.00077
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C + Cgk f++++ ++rH r+H   
     ff05119   486    YECGE-CGKAFTHRsTFIRHKRTH    508  

SM00355: domain 9 of 14, from 514 to 536: score 32.2, E = 7.3e-05
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C++ Cgk f++ ++L++Hmr+H   
     ff05119   514    FECKE-CGKAFCDSsSLIQHMRIH    536  

SM00355: domain 10 of 14, from 542 to 564: score 26.0, E = 0.0052
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk f++++ ++rH r+H   
     ff05119   542    YECSE-CGKAFTHHsVFIRHNRTH    564  

SM00355: domain 11 of 14, from 570 to 592: score 25.2, E = 0.0092
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C++ C k f   ++++rHmr+H   
     ff05119   570    LECKE-CAKAFYYSsSFTRHMRIH    592  

SM00355: domain 12 of 14, from 598 to 620: score 28.7, E = 0.00082
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C + Cgk f+++ +++rH r+H   
     ff05119   598    YVCRE-CGKAFTQPaNFVRHNRIH    620  

SM00355: domain 13 of 14, from 626 to 648: score 28.3, E = 0.0011
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C++ C k f++  aL++Hmr+H   
     ff05119   626    FECKE-CEKAFCDNfALTQHMRTH    648  

SM00355: domain 14 of 14, from 654 to 676: score 26.2, E = 0.0045
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C++ Cgk+fs+ +++++H ++H   
     ff05119   654    FECNE-CGKTFSHSsSFTHHRKIH    676  

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