# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Off06095.fasta.nr -Q ff06095.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ff06095, 373 aa vs /cdna2/lib/nr/nr library 3071326396 residues in 8985982 sequences statistics sampled from 60000 to 8981882 sequences Expectation_n fit: rho(ln(x))= 4.6043+/-0.000185; mu= 12.9150+/- 0.010 mean_var=72.4317+/-13.752, 0's: 33 Z-trim: 49 B-trim: 0 in 0/66 Lambda= 0.150699 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8985982) gi|17380293|sp|Q9UBS8.1|RNF14_HUMAN RecName: Full= ( 474) 2642 583.7 3.1e-164 gi|48145521|emb|CAG32983.1| RNF14 [Homo sapiens] ( 474) 2642 583.7 3.1e-164 gi|55625172|ref|XP_527056.1| PREDICTED: ring finge ( 474) 2638 582.8 5.7e-164 gi|114602433|ref|XP_001152699.1| PREDICTED: ring f ( 526) 2638 582.9 6.1e-164 gi|193785782|dbj|BAG51217.1| unnamed protein produ ( 474) 2633 581.7 1.2e-163 gi|109079101|ref|XP_001095132.1| PREDICTED: ring f ( 474) 2618 578.5 1.2e-162 gi|55729565|emb|CAH91513.1| hypothetical protein [ ( 474) 2614 577.6 2.1e-162 gi|57042714|ref|XP_535221.1| PREDICTED: similar to ( 474) 2552 564.1 2.4e-158 gi|124829078|gb|AAI33407.1| Ring finger protein 14 ( 474) 2534 560.2 3.6e-157 gi|194219770|ref|XP_001504014.2| PREDICTED: simila ( 474) 2477 547.8 2e-153 gi|34577096|ref|NP_899645.1| ring finger protein 1 ( 348) 2468 545.7 6.1e-153 gi|114602448|ref|XP_001152129.1| PREDICTED: ring f ( 348) 2464 544.9 1.1e-152 gi|109079105|ref|XP_001094909.1| PREDICTED: ring f ( 348) 2444 540.5 2.3e-151 gi|126290512|ref|XP_001368848.1| PREDICTED: simila ( 474) 2413 533.9 3e-149 gi|183986107|gb|AAI66497.1| Rnf14 protein [Rattus ( 382) 2394 529.7 4.6e-148 gi|149017390|gb|EDL76441.1| rCG49400, isoform CRA_ ( 384) 2394 529.7 4.6e-148 gi|73909209|gb|AAI03649.1| Rnf14 protein [Rattus n ( 479) 2394 529.8 5.3e-148 gi|148678143|gb|EDL10090.1| ring finger protein 14 ( 399) 2389 528.6 1e-147 gi|18203118|sp|Q9JI90.1|RNF14_MOUSE RecName: Full= ( 485) 2389 528.7 1.1e-147 gi|12847362|dbj|BAB27541.1| unnamed protein produc ( 485) 2389 528.7 1.1e-147 gi|148678139|gb|EDL10086.1| ring finger protein 14 ( 505) 2389 528.7 1.2e-147 gi|149017393|gb|EDL76444.1| rCG49400, isoform CRA_ ( 353) 2226 493.1 4.3e-137 gi|148678141|gb|EDL10088.1| ring finger protein 14 ( 359) 2221 492.0 9.2e-137 gi|224067351|ref|XP_002193622.1| PREDICTED: ring f ( 476) 2194 486.3 6.5e-135 gi|118097635|ref|XP_001234292.1| PREDICTED: ring f ( 470) 2159 478.7 1.3e-132 gi|149638196|ref|XP_001514922.1| PREDICTED: hypoth ( 464) 1909 424.3 2.9e-116 gi|149017391|gb|EDL76442.1| rCG49400, isoform CRA_ ( 265) 1817 404.1 2e-110 gi|54038664|gb|AAH84251.1| LOC495084 protein [Xeno ( 468) 1772 394.5 2.7e-107 gi|109068325|ref|XP_001104601.1| PREDICTED: simila ( 284) 1710 380.8 2.2e-103 gi|148678138|gb|EDL10085.1| ring finger protein 14 ( 252) 1628 363.0 4.6e-98 gi|224613426|gb|ACN60292.1| E3 ubiquitin-protein l ( 442) 1584 353.6 5.2e-95 gi|47939479|gb|AAH71542.1| Ring finger protein 14 ( 459) 1560 348.4 2e-93 gi|124481856|gb|AAI33212.1| LOC100037145 protein [ ( 451) 1542 344.5 2.9e-92 gi|51704171|gb|AAH81322.1| Ring finger protein 14 ( 456) 1520 339.7 8.2e-91 gi|68533955|gb|AAH99304.1| MGC116496 protein [Xeno ( 459) 1517 339.1 1.3e-90 gi|221039904|dbj|BAH11715.1| unnamed protein produ ( 298) 1439 321.9 1.2e-85 gi|3970856|dbj|BAA34792.1| HRIHFB2038 [Homo sapien ( 189) 1384 309.8 3.5e-82 gi|47219245|emb|CAG11707.1| unnamed protein produc ( 479) 1351 303.0 9.7e-80 gi|72007037|ref|XP_785479.1| PREDICTED: similar to ( 505) 1161 261.7 2.7e-67 gi|156226211|gb|EDO47022.1| predicted protein [Nem ( 457) 1131 255.2 2.4e-65 gi|193788586|ref|NP_001123340.1| Zn-finger (RING/c ( 455) 1089 246.0 1.3e-62 gi|125820776|ref|XP_687244.2| PREDICTED: similar t ( 442) 1053 238.2 2.9e-60 gi|189528589|ref|XP_687086.3| PREDICTED: similar t ( 439) 1041 235.6 1.8e-59 gi|221114792|ref|XP_002163123.1| PREDICTED: simila ( 447) 1035 234.3 4.5e-59 gi|156549907|ref|XP_001602028.1| PREDICTED: simila ( 543) 1024 232.0 2.7e-58 gi|110767586|ref|XP_624683.2| PREDICTED: similar t ( 484) 1019 230.8 5.2e-58 gi|215495705|gb|EEC05346.1| RING finger protein, p ( 393) 946 214.9 2.7e-53 gi|212508335|gb|EEB12059.1| RING finger protein, p ( 541) 943 214.4 5.3e-53 gi|190580496|gb|EDV20579.1| hypothetical protein T ( 462) 912 207.6 5.1e-51 gi|221041108|dbj|BAH12231.1| unnamed protein produ ( 171) 877 199.5 5e-49 >>gi|17380293|sp|Q9UBS8.1|RNF14_HUMAN RecName: Full=E3 u (474 aa) initn: 2642 init1: 2642 opt: 2642 Z-score: 3105.8 bits: 583.7 E(): 3.1e-164 Smith-Waterman score: 2642; 100.000% identity (100.000% similar) in 372 aa overlap (2-373:103-474) 10 20 30 ff0609 ALSALCKHLDNLWEEHRGSVVLFAWMQFLKE :::::::::::::::::::::::::::::: gi|173 LVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGSVVLFAWMQFLKE 80 90 100 110 120 130 40 50 60 70 80 90 ff0609 ETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 ETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVE 140 150 160 170 180 190 100 110 120 130 140 150 ff0609 SLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 SLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFE 200 210 220 230 240 250 160 170 180 190 200 210 ff0609 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRP 260 270 280 290 300 310 220 230 240 250 260 270 ff0609 CCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 CCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANK 320 330 340 350 360 370 280 290 300 310 320 330 ff0609 RLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 RLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWI 380 390 400 410 420 430 340 350 360 370 ff0609 CMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED :::::::::::::::::::::::::::::::::::::::::: gi|173 CMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED 440 450 460 470 >>gi|48145521|emb|CAG32983.1| RNF14 [Homo sapiens] (474 aa) initn: 2642 init1: 2642 opt: 2642 Z-score: 3105.8 bits: 583.7 E(): 3.1e-164 Smith-Waterman score: 2642; 100.000% identity (100.000% similar) in 372 aa overlap (2-373:103-474) 10 20 30 ff0609 ALSALCKHLDNLWEEHRGSVVLFAWMQFLKE :::::::::::::::::::::::::::::: gi|481 LVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGSVVLFAWMQFLKE 80 90 100 110 120 130 40 50 60 70 80 90 ff0609 ETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 ETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVE 140 150 160 170 180 190 100 110 120 130 140 150 ff0609 SLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 SLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFE 200 210 220 230 240 250 160 170 180 190 200 210 ff0609 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRP 260 270 280 290 300 310 220 230 240 250 260 270 ff0609 CCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 CCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANK 320 330 340 350 360 370 280 290 300 310 320 330 ff0609 RLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 RLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWI 380 390 400 410 420 430 340 350 360 370 ff0609 CMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED :::::::::::::::::::::::::::::::::::::::::: gi|481 CMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED 440 450 460 470 >>gi|55625172|ref|XP_527056.1| PREDICTED: ring finger pr (474 aa) initn: 2638 init1: 2638 opt: 2638 Z-score: 3101.1 bits: 582.8 E(): 5.7e-164 Smith-Waterman score: 2638; 99.731% identity (100.000% similar) in 372 aa overlap (2-373:103-474) 10 20 30 ff0609 ALSALCKHLDNLWEEHRGSVVLFAWMQFLKE :::::::::::::::::::::::::::::: gi|556 LVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGSVVLFAWMQFLKE 80 90 100 110 120 130 40 50 60 70 80 90 ff0609 ETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 ETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVE 140 150 160 170 180 190 100 110 120 130 140 150 ff0609 SLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFE ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|556 SLSNLIQEILDFDQAQQIKCFNSKLFLCNICFCEKLGSECMYFLECRHVYCKACLKDYFE 200 210 220 230 240 250 160 170 180 190 200 210 ff0609 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRP 260 270 280 290 300 310 220 230 240 250 260 270 ff0609 CCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 CCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANK 320 330 340 350 360 370 280 290 300 310 320 330 ff0609 RLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 RLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWI 380 390 400 410 420 430 340 350 360 370 ff0609 CMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED :::::::::::::::::::::::::::::::::::::::::: gi|556 CMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED 440 450 460 470 >>gi|114602433|ref|XP_001152699.1| PREDICTED: ring finge (526 aa) initn: 2638 init1: 2638 opt: 2638 Z-score: 3100.6 bits: 582.9 E(): 6.1e-164 Smith-Waterman score: 2638; 99.731% identity (100.000% similar) in 372 aa overlap (2-373:155-526) 10 20 30 ff0609 ALSALCKHLDNLWEEHRGSVVLFAWMQFLKE :::::::::::::::::::::::::::::: gi|114 LVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGSVVLFAWMQFLKE 130 140 150 160 170 180 40 50 60 70 80 90 ff0609 ETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVE 190 200 210 220 230 240 100 110 120 130 140 150 ff0609 SLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFE ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|114 SLSNLIQEILDFDQAQQIKCFNSKLFLCNICFCEKLGSECMYFLECRHVYCKACLKDYFE 250 260 270 280 290 300 160 170 180 190 200 210 ff0609 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRP 310 320 330 340 350 360 220 230 240 250 260 270 ff0609 CCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 CCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANK 370 380 390 400 410 420 280 290 300 310 320 330 ff0609 RLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWI 430 440 450 460 470 480 340 350 360 370 ff0609 CMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED :::::::::::::::::::::::::::::::::::::::::: gi|114 CMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED 490 500 510 520 >>gi|193785782|dbj|BAG51217.1| unnamed protein product [ (474 aa) initn: 2633 init1: 2633 opt: 2633 Z-score: 3095.3 bits: 581.7 E(): 1.2e-163 Smith-Waterman score: 2633; 99.731% identity (99.731% similar) in 372 aa overlap (2-373:103-474) 10 20 30 ff0609 ALSALCKHLDNLWEEHRGSVVLFAWMQFLKE :::::::::::::::::::::::::::::: gi|193 LVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGSVVLFAWMQFLKE 80 90 100 110 120 130 40 50 60 70 80 90 ff0609 ETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 ETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVE 140 150 160 170 180 190 100 110 120 130 140 150 ff0609 SLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 SLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFE 200 210 220 230 240 250 160 170 180 190 200 210 ff0609 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRP :::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::: gi|193 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLPLQSSLDLMADVVYCPRP 260 270 280 290 300 310 220 230 240 250 260 270 ff0609 CCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 CCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANK 320 330 340 350 360 370 280 290 300 310 320 330 ff0609 RLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 RLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWI 380 390 400 410 420 430 340 350 360 370 ff0609 CMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED :::::::::::::::::::::::::::::::::::::::::: gi|193 CMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED 440 450 460 470 >>gi|109079101|ref|XP_001095132.1| PREDICTED: ring finge (474 aa) initn: 2618 init1: 2618 opt: 2618 Z-score: 3077.6 bits: 578.5 E(): 1.2e-162 Smith-Waterman score: 2618; 98.925% identity (99.731% similar) in 372 aa overlap (2-373:103-474) 10 20 30 ff0609 ALSALCKHLDNLWEEHRGSVVLFAWMQFLKE :::::::::::::::::::::::::::::: gi|109 LVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGSVVLFAWMQFLKE 80 90 100 110 120 130 40 50 60 70 80 90 ff0609 ETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVE 140 150 160 170 180 190 100 110 120 130 140 150 ff0609 SLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFE ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|109 SLSNLIQEILDFDQAQQIKCFNSKLFLCNICFCEKLGSECMYFLECRHVYCKACLKDYFE 200 210 220 230 240 250 160 170 180 190 200 210 ff0609 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRP ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|109 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSTLDLMADVVYCPRP 260 270 280 290 300 310 220 230 240 250 260 270 ff0609 CCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 CCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANK 320 330 340 350 360 370 280 290 300 310 320 330 ff0609 RLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWI ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|109 RLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCKQYFCWI 380 390 400 410 420 430 340 350 360 370 ff0609 CMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED :::::::::::::::::.:::::::::::::::::::::::: gi|109 CMGSLSRANPYKHFNDPASPCFNRLFYAVDVDDDIWEDEVED 440 450 460 470 >>gi|55729565|emb|CAH91513.1| hypothetical protein [Pong (474 aa) initn: 2614 init1: 2614 opt: 2614 Z-score: 3072.9 bits: 577.6 E(): 2.1e-162 Smith-Waterman score: 2614; 98.925% identity (99.462% similar) in 372 aa overlap (2-373:103-474) 10 20 30 ff0609 ALSALCKHLDNLWEEHRGSVVLFAWMQFLKE :::::::::::::::::::::::::::::: gi|557 LVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGSVVLFAWMQFLKE 80 90 100 110 120 130 40 50 60 70 80 90 ff0609 ETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVE :::::::::::::::::::::::::::::::::::::::::::.:::::::: ::::::: gi|557 ETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSNVDQEEIVDGRAVQDVE 140 150 160 170 180 190 100 110 120 130 140 150 ff0609 SLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFE :::::::::::::::: :::::::::::.::::::::::::::::::::::::::::::: gi|557 SLSNLIQEILDFDQAQLIKCFNSKLFLCNICFCEKLGSECMYFLECRHVYCKACLKDYFE 200 210 220 230 240 250 160 170 180 190 200 210 ff0609 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRP 260 270 280 290 300 310 220 230 240 250 260 270 ff0609 CCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 CCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANK 320 330 340 350 360 370 280 290 300 310 320 330 ff0609 RLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 RLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWI 380 390 400 410 420 430 340 350 360 370 ff0609 CMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED :::::::::::::::::::::::::::::::::::::::::: gi|557 CMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED 440 450 460 470 >>gi|57042714|ref|XP_535221.1| PREDICTED: similar to RIN (474 aa) initn: 2552 init1: 2552 opt: 2552 Z-score: 3000.1 bits: 564.1 E(): 2.4e-158 Smith-Waterman score: 2552; 94.892% identity (99.462% similar) in 372 aa overlap (2-373:103-474) 10 20 30 ff0609 ALSALCKHLDNLWEEHRGSVVLFAWMQFLKE :::::::::::::::::.:::::::::::: gi|570 LVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGNVVLFAWMQFLKE 80 90 100 110 120 130 40 50 60 70 80 90 ff0609 ETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVE :::::::::::::::.:::::::::::: :::::::::::::::.::::.:::::::::: gi|570 ETLAYLNIVSPFELKMGSQKKVQRRTAQPSPNTELDFGGAAGSDADQEEVVDERAVQDVE 140 150 160 170 180 190 100 110 120 130 140 150 ff0609 SLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFE :::.::::::::::::::::::::::.:.::::::::::::::::::::::::::::::: gi|570 SLSSLIQEILDFDQAQQIKCFNSKLFMCNICFCEKLGSECMYFLECRHVYCKACLKDYFE 200 210 220 230 240 250 160 170 180 190 200 210 ff0609 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRP :::::::::::::::::::::::::::::::..:::::::::::::.::::::::::::: gi|570 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVDTELFARYDRLLLQSTLDLMADVVYCPRP 260 270 280 290 300 310 220 230 240 250 260 270 ff0609 CCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 CCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANK 320 330 340 350 360 370 280 290 300 310 320 330 ff0609 RLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWI :.:.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 RFLEQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWI 380 390 400 410 420 430 340 350 360 370 ff0609 CMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED ::::::::::::::.::.::::::::.::::. ::::::.:: gi|570 CMGSLSRANPYKHFTDPASPCFNRLFHAVDVNGDIWEDEIED 440 450 460 470 >>gi|124829078|gb|AAI33407.1| Ring finger protein 14 [Bo (474 aa) initn: 2534 init1: 2534 opt: 2534 Z-score: 2978.9 bits: 560.2 E(): 3.6e-157 Smith-Waterman score: 2534; 94.892% identity (98.656% similar) in 372 aa overlap (2-373:103-474) 10 20 30 ff0609 ALSALCKHLDNLWEEHRGSVVLFAWMQFLKE :::::::::::::::::::::::::::::: gi|124 LVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGSVVLFAWMQFLKE 80 90 100 110 120 130 40 50 60 70 80 90 ff0609 ETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVE :::::::::::::: .::::::::: :::: :::::::::.:::.::::.:::::::::: gi|124 ETLAYLNIVSPFELTMGSQKKVQRRMAQASSNTELDFGGATGSDIDQEEVVDERAVQDVE 140 150 160 170 180 190 100 110 120 130 140 150 ff0609 SLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFE :::.::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|124 SLSSLIQEILDFDQAQQIKCFNSKLFLCNICFCEKLGSECMYFLECRHVYCKACLKDYFE 200 210 220 230 240 250 160 170 180 190 200 210 ff0609 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRP ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|124 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSTLDLMADVVYCPRP 260 270 280 290 300 310 220 230 240 250 260 270 ff0609 CCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 SCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANK 320 330 340 350 360 370 280 290 300 310 320 330 ff0609 RLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWI :.:.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 RFLEQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWI 380 390 400 410 420 430 340 350 360 370 ff0609 CMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED ::::::::::::::.::.::::::::.::::. ::::::.:: gi|124 CMGSLSRANPYKHFTDPASPCFNRLFHAVDVNGDIWEDEIED 440 450 460 470 >>gi|194219770|ref|XP_001504014.2| PREDICTED: similar to (474 aa) initn: 2477 init1: 2477 opt: 2477 Z-score: 2912.0 bits: 547.8 E(): 2e-153 Smith-Waterman score: 2477; 92.742% identity (98.656% similar) in 372 aa overlap (2-373:103-474) 10 20 30 ff0609 ALSALCKHLDNLWEEHRGSVVLFAWMQFLKE :::::::::::::::::.:::::::::::: gi|194 LVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGNVVLFAWMQFLKE 80 90 100 110 120 130 40 50 60 70 80 90 ff0609 ETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVE :::::::::::::::.::::::::::.::: ::::.::::::::.::::.:::::::::: gi|194 ETLAYLNIVSPFELKMGSQKKVQRRTSQASLNTELEFGGAAGSDLDQEEVVDERAVQDVE 140 150 160 170 180 190 100 110 120 130 140 150 ff0609 SLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFE :::.::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|194 SLSSLIQEILDFDQAQQIKCFNSKLFLCNICFCEKLGSECMYFLECRHVYCKACLKDYFE 200 210 220 230 240 250 160 170 180 190 200 210 ff0609 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRP :::::::::::::::::::::::::::::::::::::::.::::::.::::::::::::: gi|194 IQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYERLLLQSTLDLMADVVYCPRP 260 270 280 290 300 310 220 230 240 250 260 270 ff0609 CCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANK :::.::::::::::::: :::::::::::::::::::::::::::.::.:::::::::.: gi|194 CCQFPVMQEPGCTMGICPSCNFAFCTLCRLTYHGVSPCKVTAEKLIDLQNEYLQADEAHK 320 330 340 350 360 370 280 290 300 310 320 330 ff0609 RLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWI :.:.::::::::::::::::::::::::::::::: :::::::::::::::::::::::: gi|194 RFLEQRYGKRVIQKALEEMESKEWLEKNSKSCPCCETPIEKLDGCNKMTCTGCMQYFCWI 380 390 400 410 420 430 340 350 360 370 ff0609 CMGSLSRANPYKHFNDPGSPCFNRLFYAVDVDDDIWEDEVED ::.:::::.::::::::.::::::::.::::. :: :::.:: gi|194 CMSSLSRASPYKHFNDPASPCFNRLFHAVDVNGDIXEDEIED 440 450 460 470 373 residues in 1 query sequences 3071326396 residues in 8985982 library sequences Tcomplib [34.26] (8 proc) start: Thu Jun 18 07:26:14 2009 done: Thu Jun 18 07:29:30 2009 Total Scan time: 1029.430 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]