# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Off06424.fasta.nr -Q ff06424.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ff06424, 586 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6824151 sequences Expectation_n fit: rho(ln(x))= 5.2441+/-0.000187; mu= 12.0613+/- 0.010 mean_var=79.4332+/-15.904, 0's: 35 Z-trim: 44 B-trim: 3083 in 1/66 Lambda= 0.143904 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62088570|dbj|BAD92732.1| patched variant [Homo ( 586) 3915 822.6 0 gi|55662244|emb|CAH73818.1| patched homolog 1 (Dro (1296) 3834 806.0 0 gi|134254466|ref|NP_001077071.1| patched isoform M (1381) 3834 806.1 0 gi|119613038|gb|EAW92632.1| patched homolog (Droso (1395) 3834 806.1 0 gi|134254432|ref|NP_001077072.1| patched isoform L (1446) 3834 806.1 0 gi|1381236|gb|AAC50550.1| PATCHED (1447) 3834 806.1 0 gi|160415977|sp|Q13635.2|PTC1_HUMAN Protein patche (1447) 3834 806.1 0 gi|1335864|gb|AAC50496.1| patched gene homolog; si (1296) 3822 803.5 0 gi|119900774|ref|XP_599250.3| PREDICTED: similar t (1453) 3778 794.5 0 gi|194224692|ref|XP_001494739.2| PREDICTED: patche (1395) 3777 794.2 0 gi|6225892|sp|Q61115|PTC1_MOUSE Protein patched ho (1434) 3743 787.2 0 gi|126333956|ref|XP_001368370.1| PREDICTED: simila (1724) 3742 787.0 0 gi|34421001|gb|AAQ67738.1| patched [Rattus norvegi (1434) 3741 786.8 0 gi|85719143|dbj|BAE78534.1| patched [Meriones ungu (1434) 3691 776.4 0 gi|6225890|sp|Q90693|PTC1_CHICK Protein patched ho (1442) 3596 756.7 9.6e-216 gi|38489135|gb|AAR21239.1| patched [Homo sapiens] ( 651) 3260 686.6 5.3e-195 gi|13434992|dbj|BAB18574.2| patched-1 [Xenopus lae (1239) 3250 684.8 3.6e-194 gi|13194564|gb|AAK15463.1|AF302765_1 patched-1 [Xe (1418) 3250 684.8 4e-194 gi|47506910|gb|AAH70995.1| Unknown (protein for MG (1422) 2608 551.5 5.3e-154 gi|11463863|dbj|BAB18575.1| patched-2 [Xenopus lae (1413) 2595 548.8 3.4e-153 gi|189522606|ref|XP_001922161.1| PREDICTED: patche (1242) 2504 529.9 1.5e-147 gi|169158196|emb|CAQ14877.1| patched 2 [Danio reri (1354) 2504 529.9 1.6e-147 gi|4539024|emb|CAB39726.1| patched-2 protein [Dani (1243) 2477 524.3 7.4e-146 gi|6225889|sp|Q98864|PTC1_BRARE Protein patched ho (1220) 2467 522.2 3.1e-145 gi|47228251|emb|CAG07646.1| unnamed protein produc (1197) 2249 476.9 1.3e-131 gi|149029134|gb|EDL84419.1| patched homolog 1 (Dro ( 891) 2146 455.5 2.8e-125 gi|145833847|gb|ABP96781.1| patched-1 [Polyodon sp ( 418) 2046 434.4 2.8e-119 gi|47212609|emb|CAF93285.1| unnamed protein produc (1075) 1901 404.7 6.6e-110 gi|118094535|ref|XP_422426.2| PREDICTED: similar t ( 592) 1859 395.7 1.8e-107 gi|149693711|ref|XP_001496607.1| PREDICTED: simila (1207) 1851 394.3 9.6e-107 gi|12643356|sp|Q9Y6C5|PTC2_HUMAN Protein patched h (1203) 1844 392.9 2.6e-106 gi|3929235|gb|AAC79847.1| receptor protein patched (1203) 1844 392.9 2.6e-106 gi|37182233|gb|AAQ88919.1| Patched 2 [Homo sapiens (1211) 1844 392.9 2.6e-106 gi|119890320|ref|XP_584648.3| PREDICTED: similar t (1207) 1832 390.4 1.5e-105 gi|149035554|gb|EDL90235.1| patched homolog 1 (pre ( 892) 1830 389.9 1.6e-105 gi|4325111|gb|AAD17260.1| patched 2 [Homo sapiens] (1146) 1826 389.1 3.4e-105 gi|4588015|gb|AAD25953.1|AF087651_1 patched 2 [Hom (1203) 1825 388.9 4e-105 gi|148698625|gb|EDL30572.1| patched homolog 2, iso (1117) 1824 388.7 4.4e-105 gi|6225894|sp|O35595|PTC2_MOUSE Protein patched ho (1182) 1824 388.7 4.6e-105 gi|73978000|ref|XP_539636.2| PREDICTED: similar to (1126) 1611 344.5 9.1e-92 gi|156227376|gb|EDO48180.1| predicted protein [Nem (1120) 1499 321.2 9e-85 gi|115521863|gb|ABJ09405.1| patched protein [Lytec (1416) 1459 313.0 3.4e-82 gi|157014720|gb|EAA13037.4| AGAP011395-PA [Anophel (1241) 1453 311.7 7.3e-82 gi|15426026|gb|AAK97655.1|AF409095_1 patched 2 [Ga ( 913) 1443 309.5 2.4e-81 gi|115643263|ref|XP_001194999.1| PREDICTED: simila ( 686) 1439 308.6 3.5e-81 gi|108881712|gb|EAT45937.1| patched 1, putative [A (1116) 1430 306.9 1.8e-80 gi|167874462|gb|EDS37845.1| patched [Culex quinque (1211) 1426 306.1 3.5e-80 gi|193290170|ref|NP_001123271.1| patched [Nasonia (1307) 1389 298.4 7.6e-78 gi|4883640|gb|AAD31595.1|AF117898_1 putative hedge (1318) 1369 294.3 1.4e-76 gi|193903227|gb|EDW02094.1| GH20087 [Drosophila gr (1334) 1218 262.9 3.8e-67 >>gi|62088570|dbj|BAD92732.1| patched variant [Homo sapi (586 aa) initn: 3915 init1: 3915 opt: 3915 Z-score: 4391.7 bits: 822.6 E(): 0 Smith-Waterman score: 3915; 100.000% identity (100.000% similar) in 586 aa overlap (1-586:1-586) 10 20 30 40 50 60 ff0642 PCRKSSALNSPKAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCFTSPCVSRVIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PCRKSSALNSPKAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCFTSPCVSRVIQ 10 20 30 40 50 60 70 80 90 100 110 120 ff0642 VEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQLRTEYDPHTHVYYTTAEPRSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQLRTEYDPHTHVYYTTAEPRSE 70 80 90 100 110 120 130 140 150 160 170 180 ff0642 ISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCLEPPCTKWTLSSFAEKHYAPFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCLEPPCTKWTLSSFAEKHYAPFL 130 140 150 160 170 180 190 200 210 220 230 240 ff0642 LKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRETREYDFIAAQFKYFSFYNMY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRETREYDFIAAQFKYFSFYNMY 190 200 210 220 230 240 250 260 270 280 290 300 ff0642 IVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKMWLHYFRDWLQGLQDAFDSDWE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 IVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKMWLHYFRDWLQGLQDAFDSDWE 250 260 270 280 290 300 310 320 330 340 350 360 ff0642 TGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLTKQRLVDADGIINPSAFYIYLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLTKQRLVDADGIINPSAFYIYLT 310 320 330 340 350 360 370 380 390 400 410 420 ff0642 AWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFPFYLNGLRDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFPFYLNGLRDT 370 380 390 400 410 420 430 440 450 460 470 480 ff0642 SDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQYIGLRHWLLLFISVVLACTFLVCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQYIGLRHWLLLFISVVLACTFLVCA 430 440 450 460 470 480 490 500 510 520 530 540 ff0642 VFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALAF 490 500 510 520 530 540 550 560 570 580 ff0642 LTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGSEFDFIVR :::::::::::::::::::::::::::::::::::::::::::::: gi|620 LTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGSEFDFIVR 550 560 570 580 >>gi|55662244|emb|CAH73818.1| patched homolog 1 (Drosoph (1296 aa) initn: 3834 init1: 3834 opt: 3834 Z-score: 4296.1 bits: 806.0 E(): 0 Smith-Waterman score: 3834; 99.653% identity (99.827% similar) in 577 aa overlap (10-586:423-999) 10 20 30 ff0642 PCRKSSALNSPKAAVVVVFNFAMVLLIFPAILSMDLYRR : .::::::::::::::::::::::::::: gi|556 TGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRR 400 410 420 430 440 450 40 50 60 70 80 90 ff0642 EDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 EDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ 460 470 480 490 500 510 100 110 120 130 140 150 ff0642 LRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 LRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCL 520 530 540 550 560 570 160 170 180 190 200 210 ff0642 EPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 EPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPR 580 590 600 610 620 630 220 230 240 250 260 270 ff0642 ETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 ETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKM 640 650 660 670 680 690 280 290 300 310 320 330 ff0642 WLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 WLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLT 700 710 720 730 740 750 340 350 360 370 380 390 ff0642 KQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 KQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRI 760 770 780 790 800 810 400 410 420 430 440 450 ff0642 PAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQYIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 PAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQYIG 820 830 840 850 860 870 460 470 480 490 500 510 ff0642 LRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 LRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPV 880 890 900 910 920 930 520 530 540 550 560 570 ff0642 VILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 VILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGS 940 950 960 970 980 990 580 ff0642 EFDFIVR ::::::: gi|556 EFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGLNRLPTPSPEPPPS 1000 1010 1020 1030 1040 1050 >>gi|134254466|ref|NP_001077071.1| patched isoform M [Ho (1381 aa) initn: 3834 init1: 3834 opt: 3834 Z-score: 4295.7 bits: 806.1 E(): 0 Smith-Waterman score: 3834; 99.653% identity (99.827% similar) in 577 aa overlap (10-586:508-1084) 10 20 30 ff0642 PCRKSSALNSPKAAVVVVFNFAMVLLIFPAILSMDLYRR : .::::::::::::::::::::::::::: gi|134 TGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRR 480 490 500 510 520 530 40 50 60 70 80 90 ff0642 EDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 EDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ 540 550 560 570 580 590 100 110 120 130 140 150 ff0642 LRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCL 600 610 620 630 640 650 160 170 180 190 200 210 ff0642 EPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 EPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPR 660 670 680 690 700 710 220 230 240 250 260 270 ff0642 ETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 ETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKM 720 730 740 750 760 770 280 290 300 310 320 330 ff0642 WLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 WLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLT 780 790 800 810 820 830 340 350 360 370 380 390 ff0642 KQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 KQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRI 840 850 860 870 880 890 400 410 420 430 440 450 ff0642 PAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQYIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 PAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQYIG 900 910 920 930 940 950 460 470 480 490 500 510 ff0642 LRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPV 960 970 980 990 1000 1010 520 530 540 550 560 570 ff0642 VILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 VILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGS 1020 1030 1040 1050 1060 1070 580 ff0642 EFDFIVR ::::::: gi|134 EFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGLNRLPTPSPEPPPS 1080 1090 1100 1110 1120 1130 >>gi|119613038|gb|EAW92632.1| patched homolog (Drosophil (1395 aa) initn: 3834 init1: 3834 opt: 3834 Z-score: 4295.7 bits: 806.1 E(): 0 Smith-Waterman score: 3834; 99.653% identity (99.827% similar) in 577 aa overlap (10-586:522-1098) 10 20 30 ff0642 PCRKSSALNSPKAAVVVVFNFAMVLLIFPAILSMDLYRR : .::::::::::::::::::::::::::: gi|119 TGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRR 500 510 520 530 540 550 40 50 60 70 80 90 ff0642 EDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ 560 570 580 590 600 610 100 110 120 130 140 150 ff0642 LRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCL 620 630 640 650 660 670 160 170 180 190 200 210 ff0642 EPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPR 680 690 700 710 720 730 220 230 240 250 260 270 ff0642 ETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKM 740 750 760 770 780 790 280 290 300 310 320 330 ff0642 WLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 WLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLT 800 810 820 830 840 850 340 350 360 370 380 390 ff0642 KQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRI 860 870 880 890 900 910 400 410 420 430 440 450 ff0642 PAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQYIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQYIG 920 930 940 950 960 970 460 470 480 490 500 510 ff0642 LRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPV 980 990 1000 1010 1020 1030 520 530 540 550 560 570 ff0642 VILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGS 1040 1050 1060 1070 1080 1090 580 ff0642 EFDFIVR ::::::: gi|119 EFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGLNRLPTPSPEPPPS 1100 1110 1120 1130 1140 1150 >>gi|134254432|ref|NP_001077072.1| patched isoform L' [H (1446 aa) initn: 3834 init1: 3834 opt: 3834 Z-score: 4295.5 bits: 806.1 E(): 0 Smith-Waterman score: 3834; 99.653% identity (99.827% similar) in 577 aa overlap (10-586:573-1149) 10 20 30 ff0642 PCRKSSALNSPKAAVVVVFNFAMVLLIFPAILSMDLYRR : .::::::::::::::::::::::::::: gi|134 TGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRR 550 560 570 580 590 600 40 50 60 70 80 90 ff0642 EDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 EDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ 610 620 630 640 650 660 100 110 120 130 140 150 ff0642 LRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCL 670 680 690 700 710 720 160 170 180 190 200 210 ff0642 EPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 EPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPR 730 740 750 760 770 780 220 230 240 250 260 270 ff0642 ETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 ETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKM 790 800 810 820 830 840 280 290 300 310 320 330 ff0642 WLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 WLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLT 850 860 870 880 890 900 340 350 360 370 380 390 ff0642 KQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 KQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRI 910 920 930 940 950 960 400 410 420 430 440 450 ff0642 PAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQYIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 PAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQYIG 970 980 990 1000 1010 1020 460 470 480 490 500 510 ff0642 LRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPV 1030 1040 1050 1060 1070 1080 520 530 540 550 560 570 ff0642 VILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 VILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGS 1090 1100 1110 1120 1130 1140 580 ff0642 EFDFIVR ::::::: gi|134 EFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGLNRLPTPSPEPPPS 1150 1160 1170 1180 1190 1200 >>gi|1381236|gb|AAC50550.1| PATCHED (1447 aa) initn: 3834 init1: 3834 opt: 3834 Z-score: 4295.5 bits: 806.1 E(): 0 Smith-Waterman score: 3834; 99.653% identity (99.827% similar) in 577 aa overlap (10-586:574-1150) 10 20 30 ff0642 PCRKSSALNSPKAAVVVVFNFAMVLLIFPAILSMDLYRR : .::::::::::::::::::::::::::: gi|138 TGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRR 550 560 570 580 590 600 40 50 60 70 80 90 ff0642 EDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 EDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ 610 620 630 640 650 660 100 110 120 130 140 150 ff0642 LRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 LRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCL 670 680 690 700 710 720 160 170 180 190 200 210 ff0642 EPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 EPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPR 730 740 750 760 770 780 220 230 240 250 260 270 ff0642 ETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 ETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKM 790 800 810 820 830 840 280 290 300 310 320 330 ff0642 WLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 WLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLT 850 860 870 880 890 900 340 350 360 370 380 390 ff0642 KQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 KQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRI 910 920 930 940 950 960 400 410 420 430 440 450 ff0642 PAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQYIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 PAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQYIG 970 980 990 1000 1010 1020 460 470 480 490 500 510 ff0642 LRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 LRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPV 1030 1040 1050 1060 1070 1080 520 530 540 550 560 570 ff0642 VILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 VILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGS 1090 1100 1110 1120 1130 1140 580 ff0642 EFDFIVR ::::::: gi|138 EFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGLNRLPTPSPEPPPS 1150 1160 1170 1180 1190 1200 >>gi|160415977|sp|Q13635.2|PTC1_HUMAN Protein patched ho (1447 aa) initn: 3834 init1: 3834 opt: 3834 Z-score: 4295.5 bits: 806.1 E(): 0 Smith-Waterman score: 3834; 99.653% identity (99.827% similar) in 577 aa overlap (10-586:574-1150) 10 20 30 ff0642 PCRKSSALNSPKAAVVVVFNFAMVLLIFPAILSMDLYRR : .::::::::::::::::::::::::::: gi|160 TGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRR 550 560 570 580 590 600 40 50 60 70 80 90 ff0642 EDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 EDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ 610 620 630 640 650 660 100 110 120 130 140 150 ff0642 LRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 LRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCL 670 680 690 700 710 720 160 170 180 190 200 210 ff0642 EPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 EPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPR 730 740 750 760 770 780 220 230 240 250 260 270 ff0642 ETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 ETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKM 790 800 810 820 830 840 280 290 300 310 320 330 ff0642 WLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 WLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLT 850 860 870 880 890 900 340 350 360 370 380 390 ff0642 KQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 KQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRI 910 920 930 940 950 960 400 410 420 430 440 450 ff0642 PAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQYIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 PAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQYIG 970 980 990 1000 1010 1020 460 470 480 490 500 510 ff0642 LRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 LRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPV 1030 1040 1050 1060 1070 1080 520 530 540 550 560 570 ff0642 VILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 VILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGS 1090 1100 1110 1120 1130 1140 580 ff0642 EFDFIVR ::::::: gi|160 EFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGLNRLPTPSPEPPPS 1150 1160 1170 1180 1190 1200 >>gi|1335864|gb|AAC50496.1| patched gene homolog; simila (1296 aa) initn: 3822 init1: 3822 opt: 3822 Z-score: 4282.6 bits: 803.5 E(): 0 Smith-Waterman score: 3822; 99.307% identity (99.827% similar) in 577 aa overlap (10-586:423-999) 10 20 30 ff0642 PCRKSSALNSPKAAVVVVFNFAMVLLIFPAILSMDLYRR : .::::::::::::::::::::::::::: gi|133 TGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRR 400 410 420 430 440 450 40 50 60 70 80 90 ff0642 EDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 EDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ 460 470 480 490 500 510 100 110 120 130 140 150 ff0642 LRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 LRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCL 520 530 540 550 560 570 160 170 180 190 200 210 ff0642 EPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 EPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPR 580 590 600 610 620 630 220 230 240 250 260 270 ff0642 ETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 ETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKM 640 650 660 670 680 690 280 290 300 310 320 330 ff0642 WLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 WLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLT 700 710 720 730 740 750 340 350 360 370 380 390 ff0642 KQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 KQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRI 760 770 780 790 800 810 400 410 420 430 440 450 ff0642 PAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQYIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 PAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQYIG 820 830 840 850 860 870 460 470 480 490 500 510 ff0642 LRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 LRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPV 880 890 900 910 920 930 520 530 540 550 560 570 ff0642 VILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGS :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|133 VILIASVGIGVEFTVHVALAFLTAISDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGS 940 950 960 970 980 990 580 ff0642 EFDFIVR .:::::: gi|133 DFDFIVRYFFAVLAILTILGVLNGLVLLPVLWSFFGPYPEVSPANGLNRLPTPSPEPPPS 1000 1010 1020 1030 1040 1050 >>gi|119900774|ref|XP_599250.3| PREDICTED: similar to pa (1453 aa) initn: 3778 init1: 3778 opt: 3778 Z-score: 4232.6 bits: 794.5 E(): 0 Smith-Waterman score: 3778; 97.920% identity (99.480% similar) in 577 aa overlap (10-586:573-1149) 10 20 30 ff0642 PCRKSSALNSPKAAVVVVFNFAMVLLIFPAILSMDLYRR : .::::::::::::::::::::::::::: gi|119 TGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRR 550 560 570 580 590 600 40 50 60 70 80 90 ff0642 EDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ ::::::::::::::::::::::::::::.::::::::::::::::.:::::::::::::: gi|119 EDRRLDIFCCFTSPCVSRVIQVEPQAYTETHDNTRYSPPPPYSSHGFAHETQITMQSTVQ 610 620 630 640 650 660 100 110 120 130 140 150 ff0642 LRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCL ::::::::::::::::::::::::::::..:::::::::::::::::::::::::::::: gi|119 LRTEYDPHTHVYYTTAEPRSEISVQPVTMAQDTLSCQSPESTSSTRDLLSQFSDSSLHCL 670 680 690 700 710 720 160 170 180 190 200 210 ff0642 EPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPR :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EPPCTRWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPR 730 740 750 760 770 780 220 230 240 250 260 270 ff0642 ETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKM ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|119 ETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHKSFSNVKYVMLEENKQLPKM 790 800 810 820 830 840 280 290 300 310 320 330 ff0642 WLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 WLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLT 850 860 870 880 890 900 340 350 360 370 380 390 ff0642 KQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRI :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KRRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRI 910 920 930 940 950 960 400 410 420 430 440 450 ff0642 PAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQYIG :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|119 PAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICNNYTSLGLSSYPNGYPFLFWEQYIG 970 980 990 1000 1010 1020 460 470 480 490 500 510 ff0642 LRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPV ::::::: :::::::::::::::::::::::::: ::::::::::::::::::::::::: gi|119 LRHWLLLSISVVLACTFLVCAVFLLNPWTAGIIVTVLALMTVELFGMMGLIGIKLSAVPV 1030 1040 1050 1060 1070 1080 520 530 540 550 560 570 ff0642 VILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGS 1090 1100 1110 1120 1130 1140 580 ff0642 EFDFIVR ::::::: gi|119 EFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGLNRLPTPSPEPPPS 1150 1160 1170 1180 1190 1200 >>gi|194224692|ref|XP_001494739.2| PREDICTED: patched [E (1395 aa) initn: 3777 init1: 3777 opt: 3777 Z-score: 4231.7 bits: 794.2 E(): 0 Smith-Waterman score: 3777; 98.094% identity (99.480% similar) in 577 aa overlap (10-586:517-1093) 10 20 30 ff0642 PCRKSSALNSPKAAVVVVFNFAMVLLIFPAILSMDLYRR : .::::::::::::::::::::::::::: gi|194 TGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRR 490 500 510 520 530 540 40 50 60 70 80 90 ff0642 EDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQ ::::::::::::::::::::::::::::.:.::::::::::::::::::::::::::::: gi|194 EDRRLDIFCCFTSPCVSRVIQVEPQAYTETQDNTRYSPPPPYSSHSFAHETQITMQSTVQ 550 560 570 580 590 600 100 110 120 130 140 150 ff0642 LRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCL ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|194 LRTEYDPHTHVYYTTAEPRSEISVQPVTMTQDTLSCQSPESTSSTRDLLSQFSDSSLHCL 610 620 630 640 650 660 160 170 180 190 200 210 ff0642 EPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 EPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPR 670 680 690 700 710 720 220 230 240 250 260 270 ff0642 ETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKM ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|194 ETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHKSFSNVKYVMLEENKQLPKM 730 740 750 760 770 780 280 290 300 310 320 330 ff0642 WLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 WLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLT 790 800 810 820 830 840 340 350 360 370 380 390 ff0642 KQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRI :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KRRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRI 850 860 870 880 890 900 400 410 420 430 440 450 ff0642 PAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQYIG ::::::::::::::::::::::::::::::::.::.:::::::::::::::::::::::: gi|194 PAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRAICNNYTSLGLSSYPNGYPFLFWEQYIG 910 920 930 940 950 960 460 470 480 490 500 510 ff0642 LRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPV ::::::: :::::::::::::::::::::::::: ::::::::::::::::::::::::: gi|194 LRHWLLLSISVVLACTFLVCAVFLLNPWTAGIIVTVLALMTVELFGMMGLIGIKLSAVPV 970 980 990 1000 1010 1020 520 530 540 550 560 570 ff0642 VILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGS 1030 1040 1050 1060 1070 1080 580 ff0642 EFDFIVR ::::::: gi|194 EFDFIVRYFFAVLAILTVLGVLNGLVLLPVLLSFFGPYPEVSPANGLNRLPTPSPEPPPS 1090 1100 1110 1120 1130 1140 586 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sat Aug 9 03:27:05 2008 done: Sat Aug 9 03:29:21 2008 Total Scan time: 923.200 Total Display time: 0.290 Function used was FASTA [version 34.26.5 April 26, 2007]