hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-04372007/chunk_1/iprscan-20080809-04372007.nocrc
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Query sequence: ff09358
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02985.12.fs HEAT repeat                                     27.6      9e-07   3
PF02985.12.ls HEAT repeat                                     31.6    2.6e-06   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02985.12.ls   3/3     299   336 ..     1    36 []    22.6   0.0013

Alignments of top-scoring domains:
PF02985.12.ls: domain 3 of 3, from 299 to 336: score 22.6, E = 0.0013
                   *->e.ildellplll.kllnDpdpeVReaAaeaLgalaevl<-*
                       ++++++l+ ++ +ll+D+dp+VR  Aa +L +l+++l   
     ff09358   299    LkLQERVLNNVViHLLGDEDPRVRHVAAASLIRLVPKL    336  

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