hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20090618/iprscan-20090618-07464434/chunk_1/iprscan-20090618-07464434.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: ff14788 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00667 27.5 0.0019 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00667 1/1 16 48 .. 1 33 [] 27.5 0.0019 Alignments of top-scoring domains: SM00667: domain 1 of 1, from 16 to 48: score 27.5, E = 0.0019 *->rrselnrlileYLlenGyketaetlqkEtglsl<-* +s++ rl+l YL+++++ t +t+ E++ + ff14788 16 LPSDVARLVLGYLQQENLISTCQTFILESSDLK 48 //