hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-05431656/chunk_1/iprscan-20080809-05431656.nocrc
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Query sequence: fg01127
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00199                                                  65.3    7.9e-15   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00199    1/1      47   106 ..     1    65 []    65.3  7.9e-15

Alignments of top-scoring domains:
SM00199: domain 1 of 1, from 47 to 106: score 65.3, E = 7.9e-15
                   *->plrCvClsytsiqkkIplkriklsyyritsssCpkpaVIFttKKkGr
                      ++rC+C ++    +++ ++++k +++  + ++C + ++++++K+++r
     fg01127    47    SYRCPCRFFE---SHVARANVK-HLKILNTPNCAL-QIVARLKNNNR 88   

                   evCaDPkakWVQdyikkL<-*
                   +vC DPk kW+Q+y++k    
     fg01127    89 QVCIDPKLKWIQEYLEKA    106  

//