hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-05503636/chunk_1/iprscan-20080809-05503636.nocrc
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Query sequence: fg01236
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N 
--------       -----------                              -----    ------- ---
PF00613.10.fs  Phosphoinositide 3-kinase family, acce   255.1    5.8e-75   1
PF00613.10.ls  Phosphoinositide 3-kinase family, acce   256.9      4e-74   1
PF00454.17.ls  Phosphatidylinositol 3- and 4-kinase     252.3      9e-73   1
PF00454.17.fs  Phosphatidylinositol 3- and 4-kinase     250.7    2.8e-72   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
PF00613.10.fs    1/1    1578  1747 ..     1   213 []   255.1  5.8e-75
PF00613.10.ls    1/1    1578  1747 ..     1   213 []   256.9    4e-74
PF00454.17.fs    1/1    1863  2070 ..     1   329 []   250.7  2.8e-72
PF00454.17.ls    1/1    1863  2070 ..     1   329 []   252.3    9e-73

Alignments of top-scoring domains:
PF00613.10.fs: domain 1 of 1, from 1578 to 1747: score 255.1, E = 5.8e-75
                   *->kdlkpNlnekerkeleaIlayDPlskLtaeEkdLiWkfRhysltsnP
                      +++++N +e++++e+++++++DP++               +s+  +P
     fg01236  1578    PARFKN-TEAIGNEVTRLVRLDPGA---------------VSD--VP 1606 

                   kALtLmCVGPKlLlLSVkWsdlsevaealsLldkRvWapidpvdALELLd
                   +A+       K+L+   +W++++++a++ls++++  Wap+dp+++L++++
     fg01236  1607 EAI-------KFLV---TWHTIDADAPELSHVLC--WAPTDPPTGLSYFS 1644 

                   pkFadkteeVReYAVkcLesYasDeELlfYLLQLVQALKYEnldepfhdS
                   ++++++ + +++Y+Vk+L+s ++++++lfY++Q+VQAL+Y+      +++
     fg01236  1645 SMYPPH-PLTAQYGVKVLRS-FPPDAILFYIPQIVQALRYD------KMG 1686 

                   pLsrFLlqRAlkNrsrlGHfFfWyLksEiYkDdeghdkdvIserFgvllE
                   ++++++l++A+k++ +l+H+F+W++k++iY+D+egh+kd+   ++g+ll+
     fg01236  1687 YVREYILWAASKSQ-LLAHQFIWNMKTNIYLDEEGHQKDP---DIGDLLD 1732 

                   sylrecdstsleglnk<-*
                   ++++e+ ++sl+g++k   
     fg01236  1733 QLVEEI-TGSLSGPAK    1747 

PF00613.10.ls: domain 1 of 1, from 1578 to 1747: score 256.9, E = 4e-74
                   *->kdlkpNlnekerkeleaIlayDPlskLtaeEkdLiWkfRhysltsnP
                      +++++N +e++++e+++++++DP++               +s+  +P
     fg01236  1578    PARFKN-TEAIGNEVTRLVRLDPGA---------------VSD--VP 1606 

                   kALtLmCVGPKlLlLSVkWsdlsevaealsLldkRvWapidpvdALELLd
                   +A+       K+L+   +W++++++a++ls++++  Wap+dp+++L++++
     fg01236  1607 EAI-------KFLV---TWHTIDADAPELSHVLC--WAPTDPPTGLSYFS 1644 

                   pkFadkteeVReYAVkcLesYasDeELlfYLLQLVQALKYEnldepfhdS
                   ++++++ + +++Y+Vk+L+s ++++++lfY++Q+VQAL+Y+      +++
     fg01236  1645 SMYPPH-PLTAQYGVKVLRS-FPPDAILFYIPQIVQALRYD------KMG 1686 

                   pLsrFLlqRAlkNrsrlGHfFfWyLksEiYkDdeghdkdvIserFgvllE
                   ++++++l++A+k++ +l+H+F+W++k++iY+D+egh+kd+   ++g+ll+
     fg01236  1687 YVREYILWAASKSQ-LLAHQFIWNMKTNIYLDEEGHQKDP---DIGDLLD 1732 

                   sylrecdstsleglnk<-*
                   ++++e+ ++sl+g++k   
     fg01236  1733 QLVEEI-TGSLSGPAK    1747 

PF00454.17.fs: domain 1 of 1, from 1863 to 2070: score 250.7, E = 2.8e-72
                   *->gypfifKgGdDLrsrQDelvlQligVfKPkDEEPyApnNPkgtkvsq
                      ++++ifK+GdD+r  QD+l lQ+i                       
     fg01236  1863    WQAAIFKVGDDCR--QDMLALQII----------------------- 1884 

                   GerlmnkllkgegldrrRnlqltaYlviplgpgsGlIEwvpnsttlaeil
                      l++++ +  gld+     +++Y+v++++pg+G+IE++p++t+ +++ 
     fg01236  1885 --DLFKNIFQLVGLDLF----VFPYRVVATAPGCGVIECIPDCTSRDQLG 1928 

                   rtymvkkaikdfnksrffkdkkttkkleknakllkehkllqmvldrkqlt
                   r +                                               
     fg01236  1929 RQTD---------------------------------------------- 1932 

                   llekvevFeeklsntpkpgllqwFvkknpdaapyeewfeRfardnfvrSc
                                     g++++F+ +++d+ ++ ++++  ar nf+rS+
     fg01236  1933 -----------------FGMYDYFTRQYGDE-STLAFQQ--ARYNFIRSM 1962 

                   AgmsvldYiLGigDRHldNiLvkkndkktGklfHIDFGlcfghvkgkrgp
                   A +s l ++L+i DRH++Ni++    +k+G+++HIDFG++f+   +++g+
     fg01236  1963 AAYSLLLFLLQIKDRHNGNIML----DKKGHIIHIDFGFMFE--SSPGGN 2006 

                   kpervPFrLTrWPQaklpmveamggyiasLgpsgdeglFrelceeayral
                     ++++ +LT       +mv+ mgg     ++ + + +F e+c++ y+a+
     fg01236  2007 LGWEPDIKLTD------EMVMIMGGK----MEATPFKWFMEMCVRGYLAV 2046 

                   RrnanlllnlLkkkAvarGelmledglpdwrs<-*
                   R +++++++l          lml++glp++r    
     fg01236  2047 RPYMDAVVSLV--------TLMLDTGLPCFRG    2070 

PF00454.17.ls: domain 1 of 1, from 1863 to 2070: score 252.3, E = 9e-73
                   *->gypfifKgGdDLrsrQDelvlQligVfKPkDEEPyApnNPkgtkvsq
                      ++++ifK+GdD+r  QD+l lQ+i                       
     fg01236  1863    WQAAIFKVGDDCR--QDMLALQII----------------------- 1884 

                   GerlmnkllkgegldrrRnlqltaYlviplgpgsGlIEwvpnsttlaeil
                      l++++ +  gld+     +++Y+v++++pg+G+IE++p++t+ +++ 
     fg01236  1885 --DLFKNIFQLVGLDLF----VFPYRVVATAPGCGVIECIPDCTSRDQLG 1928 

                   rtymvkkaikdfnksrffkdkkttkkleknakllkehkllqmvldrkqlt
                   r +                                               
     fg01236  1929 RQTD---------------------------------------------- 1932 

                   llekvevFeeklsntpkpgllqwFvkknpdaapyeewfeRfardnfvrSc
                                     g++++F+ +++d+ ++ ++++  ar nf+rS+
     fg01236  1933 -----------------FGMYDYFTRQYGDE-STLAFQQ--ARYNFIRSM 1962 

                   AgmsvldYiLGigDRHldNiLvkkndkktGklfHIDFGlcfghvkgkrgp
                   A +s l ++L+i DRH++Ni++    +k+G+++HIDFG++f+   +++g+
     fg01236  1963 AAYSLLLFLLQIKDRHNGNIML----DKKGHIIHIDFGFMFE--SSPGGN 2006 

                   kpervPFrLTrWPQaklpmveamggyiasLgpsgdeglFrelceeayral
                     ++++ +LT       +mv+ mgg     ++ + + +F e+c++ y+a+
     fg01236  2007 LGWEPDIKLTD------EMVMIMGGK----MEATPFKWFMEMCVRGYLAV 2046 

                   RrnanlllnlLkkkAvarGelmledglpdwrs<-*
                   R +++++++l          lml++glp++r    
     fg01236  2047 RPYMDAVVSLV--------TLMLDTGLPCFRG    2070 

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