hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-06211455/chunk_1/iprscan-20080809-06211455.nocrc
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Query sequence: fg01357
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00365.10.fs Phosphofructokinase                            144.9    1.8e-50   2
PF00365.10.ls Phosphofructokinase                            131.2    2.6e-36   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00365.10.fs   1/2      55   270 ..     1   241 [.   142.9  9.5e-50
PF00365.10.ls   1/1      55   330 ..     1   312 []   131.2  2.6e-36

Alignments of top-scoring domains:
PF00365.10.fs: domain 1 of 2, from 55 to 270: score 142.9, E = 9.5e-50
                   *->KkIgVLTSGGDApGMNAAiRAVVRsAiaeGleVygIyeGYaGLvaGG
                       + ++L  G  A GMNAA+R+ VR++i++G  Vy++++G++GL +G 
     fg01357    55    -SLAILNVGAPAAGMNAAVRSAVRTGISHGHTVYVVHDGFEGLAKG- 99   

                   dnIkqlewesVsdiiqrGGTilgSARcpEFrerEGRlkAa.enLkkhGId
                    +  ++ w +V+ ++ rGG  lg+ R    + + G+l  + en +  GI 
     fg01357   100 -QVQEVGWHDVAGWLGRGGSMLGTKR----TLPKGQLESIvENIRIYGIH 144  

                   aLVVIGGDGSytGAdlLtsEhgsLleeLvkeGkiteeevakyqylniv..
                   aL V+GG   y G ++L++  g                  +y  l iv  
     fg01357   145 ALLVVGGFEAYEGVLQLVEARG------------------RYEELCIVmc 176  

                   GlpGTIDNDisGTDyTIGfdTAlntiveaIDrIrdTAs.SHqRtFVVEVM
                     p TI N ++GTD+  G dTA+n ++e  DrI+  As+   R+F+VE M
     fg01357   177 VIPATISNNVPGTDFSLGSDTAVNAAMESCDRIKQSASgTKRRVFIVETM 226  

                   GRhCGdlALvaGiAgGADyIvIPEapApedfweeelanrlkrgrerGK<-
                   G +CG+lA v+GiA GAD+  + E p    f+  +l+ +++   e+ K  
     fg01357   227 GGYCGYLATVTGIAVGADAAYVFEDP----FNIHDLKVNVEHMTEKMK   270  

                   *
                    
     fg01357     -   -    

PF00365.10.ls: domain 1 of 1, from 55 to 330: score 131.2, E = 2.6e-36
                   *->KkIgVLTSGGDApGMNAAiRAVVRsAiaeGleVygIyeGYaGLvaGG
                       + ++L  G  A GMNAA+R+ VR++i++G  Vy++++G++GL +G 
     fg01357    55    -SLAILNVGAPAAGMNAAVRSAVRTGISHGHTVYVVHDGFEGLAKG- 99   

                   dnIkqlewesVsdiiqrGGTilgSARcpEFrerEGRlkAa.enLkkhGId
                    +  ++ w +V+ ++ rGG  lg+ R    + + G+l  + en +  GI 
     fg01357   100 -QVQEVGWHDVAGWLGRGGSMLGTKR----TLPKGQLESIvENIRIYGIH 144  

                   aLVVIGGDGSytGAdlLtsEhgsLleeLvkeGkiteeevakyqylniv..
                   aL V+GG   y G ++L++  g                  +y  l iv  
     fg01357   145 ALLVVGGFEAYEGVLQLVEARG------------------RYEELCIVmc 176  

                   GlpGTIDNDisGTDyTIGfdTAlntiveaIDrIrdTAs.SHqRtFVVEVM
                     p TI N ++GTD+  G dTA+n ++e  DrI+  As+   R+F+VE M
     fg01357   177 VIPATISNNVPGTDFSLGSDTAVNAAMESCDRIKQSASgTKRRVFIVETM 226  

                   GRhCGdlALvaGiAgGADyIvIPEapApedfweeelanrlkrgrerGK..
                   G +CG+lA v+GiA GAD+  + E p    f+  +l+ +++   e+ K++
     fg01357   227 GGYCGYLATVTGIAVGADAAYVFEDP----FNIHDLKVNVEHMTEKMKtd 272  

                   .rhnIviVAEgaidkqgkpitseavkklkvegLg...ldtRvTVLGHvQR
                       +v   E   d      t e++ +l  +  g++ +d+R +VLGH Q 
     fg01357   273 iQRGLVLRNEKCHD----YYTTEFLYNLYSSE-GkgvFDCRTNVLGHLQQ 317  

                   GGtPtAfDRiLASrmGaeAVeaLLe<-*
                    G PtA        +G     +LL+   
     fg01357   318 -GQPTAG-------LG----RQLLA    330  

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