hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-06464810/chunk_1/iprscan-20080809-06464810.nocrc
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Query sequence: fg02027
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00324                                                 236.0    3.2e-66   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00324    1/1     479   670 ..     1   193 []   236.0  3.2e-66

Alignments of top-scoring domains:
SM00324: domain 1 of 1, from 479 to 670: score 236.0, E = 3.2e-66
                   *->spiPiivekCieylekrGldteGIYRvsGsksrvkeLreafdsged.
                      +++P++v++C+++lek+Gl+t+GI+Rv  sk+rv++Lre+fd+g d 
     fg02027   479    RQVPRLVDSCCQHLEKHGLQTVGIFRVGSSKKRVRQLREEFDRGIDv 525  

                   dldsldesiteesedleeydvhdvAglLKlyLReLPePLltfelyeefie
                   +             ++ee++vhdvA lLK +LR++P+PLlt+ely  fi+
     fg02027   526 S-------------LEEEHSVHDVAALLKEFLRDMPDPLLTRELYTAFIN 562  

                   aaklyqieatsrkqseksedeeerlralrellslLPpanratLryLl.HL
                                      ++ee+l  l++l++lLPp+n++tL++Ll++L
     fg02027   563 TLL---------------LEPEEQLGTLQLLIYLLPPCNCDTLHRLLqFL 597  

                   nrVa...........ehsevNkMtarNLAivFgPtLlrpp..........
                   + Va++ +++ +++++    NkMt+ NLA++FgP+Ll+ +++++++ + +
     fg02027   598 SIVArhaddniskdgQEVTGNKMTSLNLATIFGPNLLHKQkssdkefsvq 647  

                   ....ltdikhqnkvvetlienad<-*
                   ++ ++ +++ +++vv+ +ien++   
     fg02027   648 ssarAEESTAIIAVVQKMIENYE    670  

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