# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofg02418.fasta.nr -Q fg02418.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fg02418, 547 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6822502 sequences Expectation_n fit: rho(ln(x))= 5.1329+/-0.000188; mu= 13.4928+/- 0.011 mean_var=81.0196+/-15.678, 0's: 29 Z-trim: 46 B-trim: 133 in 1/65 Lambda= 0.142488 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62087844|dbj|BAD92369.1| structure specific rec ( 547) 3876 806.4 0 gi|60552474|gb|AAH91486.1| SSRP1 protein [Homo sap ( 633) 788 171.6 5.1e-40 gi|74195932|dbj|BAE30524.1| unnamed protein produc ( 257) 783 170.3 5.3e-40 gi|73982281|ref|XP_849848.1| PREDICTED: similar to ( 708) 788 171.7 5.5e-40 gi|73982283|ref|XP_859953.1| PREDICTED: similar to ( 708) 788 171.7 5.5e-40 gi|730840|sp|Q08945|SSRP1_HUMAN FACT complex subun ( 709) 788 171.7 5.5e-40 gi|151554654|gb|AAI49986.1| SSRP1 protein [Bos tau ( 709) 788 171.7 5.5e-40 gi|73982285|ref|XP_859991.1| PREDICTED: similar to ( 711) 788 171.7 5.5e-40 gi|194218091|ref|XP_001497140.2| PREDICTED: struct ( 606) 787 171.4 5.7e-40 gi|109106294|ref|XP_001103334.1| PREDICTED: simila ( 709) 787 171.5 6.3e-40 gi|123229649|emb|CAM22342.1| structure specific re ( 623) 783 170.6 1e-39 gi|116283314|gb|AAH04848.1| Ssrp1 protein [Mus mus ( 633) 783 170.6 1e-39 gi|110283006|sp|Q08943|SSRP1_MOUSE FACT complex su ( 708) 783 170.7 1.1e-39 gi|83305804|sp|Q04931|SSRP1_RAT FACT complex subun ( 709) 783 170.7 1.1e-39 gi|27502780|gb|AAH42502.1| Ssrp1 protein [Mus musc ( 711) 783 170.7 1.1e-39 gi|126333240|ref|XP_001376238.1| PREDICTED: simila ( 712) 772 168.4 5.4e-39 gi|8170740|gb|AAB19500.2| HMG1-related DNA-binding ( 708) 756 165.1 5.2e-38 gi|110283005|sp|Q04678|SSRP1_CHICK FACT complex su ( 706) 742 162.2 3.9e-37 gi|49250826|gb|AAH74541.1| Ssrp1 protein [Xenopus ( 629) 649 143.1 2e-31 gi|68533730|gb|AAH98960.1| MGC114656 protein [Xeno ( 365) 645 142.0 2.4e-31 gi|52138889|gb|AAH82613.1| SSRP1 protein [Xenopus ( 458) 645 142.1 2.8e-31 gi|82175412|sp|Q9W602|SSRP1_XENLA FACT complex sub ( 693) 645 142.3 3.8e-31 gi|33604076|gb|AAH56311.1| Structure specific reco ( 518) 578 128.4 4.3e-27 gi|47215698|emb|CAG04782.1| unnamed protein produc ( 669) 579 128.7 4.5e-27 gi|50417356|gb|AAH77083.1| Ssrp1b protein [Danio r ( 543) 577 128.2 5.2e-27 gi|189515416|ref|XP_001923156.1| PREDICTED: struct ( 706) 577 128.3 6.3e-27 gi|211520|gb|AAA48685.1| HMG box (bp. 1499..1757) ( 669) 500 112.5 3.5e-22 gi|110287972|sp|Q4H2R2|SSRP1_CIOIN FACT complex su ( 704) 418 95.6 4.3e-17 gi|115619725|ref|XP_001191271.1| PREDICTED: simila ( 97) 404 92.0 7.4e-17 gi|193911146|gb|EDW10013.1| GI18750 [Drosophila mo ( 734) 399 91.7 6.7e-16 gi|194194856|gb|EDX08432.1| GD25013 [Drosophila si ( 689) 396 91.1 9.7e-16 gi|194135491|gb|EDW57007.1| GM15512 [Drosophila se ( 697) 396 91.1 9.8e-16 gi|193902052|gb|EDW00919.1| GH21151 [Drosophila gr ( 744) 395 90.9 1.2e-15 gi|12644386|sp|Q05344|SSRP1_DROME FACT complex sub ( 723) 391 90.1 2.1e-15 gi|28557563|gb|AAO45187.1| SD06504p [Drosophila me ( 723) 391 90.1 2.1e-15 gi|190659652|gb|EDV56865.1| GG19998 [Drosophila er ( 724) 391 90.1 2.1e-15 gi|194178782|gb|EDW92393.1| GE11532 [Drosophila ya ( 726) 391 90.1 2.1e-15 gi|193662252|ref|XP_001950286.1| PREDICTED: simila ( 533) 389 89.6 2.2e-15 gi|110287973|sp|Q293F6|SSRP1_DROPS FACT complex su ( 722) 389 89.7 2.7e-15 gi|194109263|gb|EDW31306.1| GL11071 [Drosophila pe ( 727) 389 89.7 2.7e-15 gi|194144565|gb|EDW60961.1| GJ21774 [Drosophila vi ( 729) 389 89.7 2.8e-15 gi|190619950|gb|EDV35474.1| GF12460 [Drosophila an ( 728) 385 88.9 4.9e-15 gi|290280|gb|AAA28914.1| single-stranded recogniti ( 723) 382 88.2 7.4e-15 gi|190582359|gb|EDV22432.1| hypothetical protein T ( 694) 372 86.2 3e-14 gi|194162222|gb|EDW77123.1| GK22092 [Drosophila wi ( 730) 371 86.0 3.6e-14 gi|156553871|ref|XP_001600877.1| PREDICTED: simila ( 735) 370 85.8 4.2e-14 gi|91091374|ref|XP_973014.1| PREDICTED: similar to ( 712) 369 85.6 4.7e-14 gi|110766132|ref|XP_001120264.1| PREDICTED: simila ( 728) 364 84.5 9.7e-14 gi|156218408|gb|EDO39306.1| predicted protein [Nem ( 451) 341 79.6 1.8e-12 gi|169647739|gb|ACA61871.1| CG4797 [Drosophila mel ( 493) 331 77.6 8e-12 >>gi|62087844|dbj|BAD92369.1| structure specific recogni (547 aa) initn: 3876 init1: 3876 opt: 3876 Z-score: 4305.2 bits: 806.4 E(): 0 Smith-Waterman score: 3876; 100.000% identity (100.000% similar) in 547 aa overlap (1-547:1-547) 10 20 30 40 50 60 fg0241 GGRWWSSPVPGRQGPRSPTGPSTWTIPRSQPRGAGESIMWGGGEPWVWGRGVVGAVRGKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GGRWWSSPVPGRQGPRSPTGPSTWTIPRSQPRGAGESIMWGGGEPWVWGRGVVGAVRGKP 10 20 30 40 50 60 70 80 90 100 110 120 fg0241 CTLSWIGSRAMCGLLADPGVPLLVAMAPAGAARAGVGLGVSGIPGPVLHPGLDLDPRALQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 CTLSWIGSRAMCGLLADPGVPLLVAMAPAGAARAGVGLGVSGIPGPVLHPGLDLDPRALQ 70 80 90 100 110 120 130 140 150 160 170 180 fg0241 RPSVGFQAEEILRHPGAAGSCYLAPSVSTARCCLSCLSVFLLNSDSQPAEHPHTHSGVGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RPSVGFQAEEILRHPGAAGSCYLAPSVSTARCCLSCLSVFLLNSDSQPAEHPHTHSGVGA 130 140 150 160 170 180 190 200 210 220 230 240 fg0241 QLPVYLVSLVQPGALPRPPQAGVDMAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 QLPVYLVSLVQPGALPRPPQAGVDMAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSK 190 200 210 220 230 240 250 260 270 280 290 300 fg0241 TGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLE 250 260 270 280 290 300 310 320 330 340 350 360 fg0241 LMEKDLCVKGWNWGTVKFGGESWGRLRFGEEDRVKGFSLLLVLLFSLCHCLWFPIYLHVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LMEKDLCVKGWNWGTVKFGGESWGRLRFGEEDRVKGFSLLLVLLFSLCHCLWFPIYLHVH 310 320 330 340 350 360 370 380 390 400 410 420 fg0241 HVFIEYLQYTAWGWGYSLNRLTAVSCLCGTQFGGNIAYADLRGGACGWISPFLTGQLLSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 HVFIEYLQYTAWGWGYSLNRLTAVSCLCGTQFGGNIAYADLRGGACGWISPFLTGQLLSF 370 380 390 400 410 420 430 440 450 460 470 480 fg0241 DIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEVR 430 440 450 460 470 480 490 500 510 520 530 540 fg0241 LPLVALAADGAEQALAGLGAGPAAWLPICAFAGLCPECVVKGGCNPGHGRCHLHLPGAAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LPLVALAADGAEQALAGLGAGPAAWLPICAFAGLCPECVVKGGCNPGHGRCHLHLPGAAV 490 500 510 520 530 540 fg0241 SDSSWSL ::::::: gi|620 SDSSWSL >>gi|60552474|gb|AAH91486.1| SSRP1 protein [Homo sapiens (633 aa) initn: 788 init1: 788 opt: 788 Z-score: 873.7 bits: 171.6 E(): 5.1e-40 Smith-Waterman score: 1014; 59.561% identity (62.382% similar) in 319 aa overlap (205-523:1-212) 180 190 200 210 220 230 fg0241 HSGVGAQLPVYLVSLVQPGALPRPPQAGVDMAETLEFNDVYQEVKGSMNDGRLRLSRQGI :::::::::::::::::::::::::::::: gi|605 MAETLEFNDVYQEVKGSMNDGRLRLSRQGI 10 20 30 240 250 260 270 280 290 fg0241 IFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|605 IFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFK 40 50 60 70 80 90 300 310 320 330 340 350 fg0241 THYRLELMEKDLCVKGWNWGTVKFGGESWGRLRFGEEDRVKGFSLLLVLLFSLCHCLWFP :::::::::::::::::::::::::: gi|605 THYRLELMEKDLCVKGWNWGTVKFGG---------------------------------- 100 110 360 370 380 390 400 410 fg0241 IYLHVHHVFIEYLQYTAWGWGYSLNRLTAVSCLCGTQFGGNIAYADLRGGACGWISPFLT gi|605 ------------------------------------------------------------ 420 430 440 450 460 470 fg0241 GQLLSFDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|605 -QLLSFDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGV 120 130 140 150 160 170 480 490 500 510 520 530 fg0241 DPVEVRLPLVALAADGAEQALAGLGAGPAAWLPICAFAGLCPECVVKGGCNPGHGRCHLH :::: :.: . .: . ..: : :: : : .:.. : gi|605 DPVE------AFAQNVLSKADVIQATGDA----ICIFREL--QCLTPRGRYDIRIYPTFL 180 190 200 210 220 540 fg0241 LPGAAVSDSSWSL gi|605 HLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDI 230 240 250 260 270 280 >>gi|74195932|dbj|BAE30524.1| unnamed protein product [M (257 aa) initn: 783 init1: 783 opt: 783 Z-score: 873.3 bits: 170.3 E(): 5.3e-40 Smith-Waterman score: 1009; 58.934% identity (62.382% similar) in 319 aa overlap (205-523:1-212) 180 190 200 210 220 230 fg0241 HSGVGAQLPVYLVSLVQPGALPRPPQAGVDMAETLEFNDVYQEVKGSMNDGRLRLSRQGI :::::::::..::::::::::::::::::: gi|741 MAETLEFNDIFQEVKGSMNDGRLRLSRQGI 10 20 30 240 250 260 270 280 290 fg0241 IFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 IFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFK 40 50 60 70 80 90 300 310 320 330 340 350 fg0241 THYRLELMEKDLCVKGWNWGTVKFGGESWGRLRFGEEDRVKGFSLLLVLLFSLCHCLWFP :::::::::::::::::::::::::: gi|741 THYRLELMEKDLCVKGWNWGTVKFGG---------------------------------- 100 110 360 370 380 390 400 410 fg0241 IYLHVHHVFIEYLQYTAWGWGYSLNRLTAVSCLCGTQFGGNIAYADLRGGACGWISPFLT gi|741 ------------------------------------------------------------ 420 430 440 450 460 470 fg0241 GQLLSFDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 -QLLSFDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGV 120 130 140 150 160 170 480 490 500 510 520 530 fg0241 DPVEVRLPLVALAADGAEQALAGLGAGPAAWLPICAFAGLCPECVVKGGCNPGHGRCHLH :::: :.: . .: . ..: : :: : : .:.. : gi|741 DPVE------AFAQNVLSKADVIQATGDA----ICIFREL--QCLTPRGRYDIRIYPTFL 180 190 200 210 220 540 fg0241 LPGAAVSDSSWSL gi|741 HLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVI 230 240 250 >>gi|73982281|ref|XP_849848.1| PREDICTED: similar to str (708 aa) initn: 788 init1: 788 opt: 788 Z-score: 873.0 bits: 171.7 E(): 5.5e-40 Smith-Waterman score: 1014; 59.561% identity (62.382% similar) in 319 aa overlap (205-523:1-212) 180 190 200 210 220 230 fg0241 HSGVGAQLPVYLVSLVQPGALPRPPQAGVDMAETLEFNDVYQEVKGSMNDGRLRLSRQGI :::::::::::::::::::::::::::::: gi|739 MAETLEFNDVYQEVKGSMNDGRLRLSRQGI 10 20 30 240 250 260 270 280 290 fg0241 IFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 IFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFK 40 50 60 70 80 90 300 310 320 330 340 350 fg0241 THYRLELMEKDLCVKGWNWGTVKFGGESWGRLRFGEEDRVKGFSLLLVLLFSLCHCLWFP :::::::::::::::::::::::::: gi|739 THYRLELMEKDLCVKGWNWGTVKFGG---------------------------------- 100 110 360 370 380 390 400 410 fg0241 IYLHVHHVFIEYLQYTAWGWGYSLNRLTAVSCLCGTQFGGNIAYADLRGGACGWISPFLT gi|739 ------------------------------------------------------------ 420 430 440 450 460 470 fg0241 GQLLSFDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 -QLLSFDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGV 120 130 140 150 160 170 480 490 500 510 520 530 fg0241 DPVEVRLPLVALAADGAEQALAGLGAGPAAWLPICAFAGLCPECVVKGGCNPGHGRCHLH :::: :.: . .: . ..: : :: : : .:.. : gi|739 DPVE------AFAQNVLSKADVIQATGDA----ICIFREL--QCLTPRGRYDIRIYPTFL 180 190 200 210 220 540 fg0241 LPGAAVSDSSWSL gi|739 HLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDI 230 240 250 260 270 280 >>gi|73982283|ref|XP_859953.1| PREDICTED: similar to str (708 aa) initn: 788 init1: 788 opt: 788 Z-score: 873.0 bits: 171.7 E(): 5.5e-40 Smith-Waterman score: 1014; 59.561% identity (62.382% similar) in 319 aa overlap (205-523:1-212) 180 190 200 210 220 230 fg0241 HSGVGAQLPVYLVSLVQPGALPRPPQAGVDMAETLEFNDVYQEVKGSMNDGRLRLSRQGI :::::::::::::::::::::::::::::: gi|739 MAETLEFNDVYQEVKGSMNDGRLRLSRQGI 10 20 30 240 250 260 270 280 290 fg0241 IFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 IFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFK 40 50 60 70 80 90 300 310 320 330 340 350 fg0241 THYRLELMEKDLCVKGWNWGTVKFGGESWGRLRFGEEDRVKGFSLLLVLLFSLCHCLWFP :::::::::::::::::::::::::: gi|739 THYRLELMEKDLCVKGWNWGTVKFGG---------------------------------- 100 110 360 370 380 390 400 410 fg0241 IYLHVHHVFIEYLQYTAWGWGYSLNRLTAVSCLCGTQFGGNIAYADLRGGACGWISPFLT gi|739 ------------------------------------------------------------ 420 430 440 450 460 470 fg0241 GQLLSFDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 -QLLSFDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGV 120 130 140 150 160 170 480 490 500 510 520 530 fg0241 DPVEVRLPLVALAADGAEQALAGLGAGPAAWLPICAFAGLCPECVVKGGCNPGHGRCHLH :::: :.: . .: . ..: : :: : : .:.. : gi|739 DPVE------AFAQNVLSKADVIQATGDA----ICIFREL--QCLTPRGRYDIRIYPTFL 180 190 200 210 220 540 fg0241 LPGAAVSDSSWSL gi|739 HLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDI 230 240 250 260 270 280 >>gi|730840|sp|Q08945|SSRP1_HUMAN FACT complex subunit S (709 aa) initn: 788 init1: 788 opt: 788 Z-score: 873.0 bits: 171.7 E(): 5.5e-40 Smith-Waterman score: 1014; 59.561% identity (62.382% similar) in 319 aa overlap (205-523:1-212) 180 190 200 210 220 230 fg0241 HSGVGAQLPVYLVSLVQPGALPRPPQAGVDMAETLEFNDVYQEVKGSMNDGRLRLSRQGI :::::::::::::::::::::::::::::: gi|730 MAETLEFNDVYQEVKGSMNDGRLRLSRQGI 10 20 30 240 250 260 270 280 290 fg0241 IFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|730 IFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFK 40 50 60 70 80 90 300 310 320 330 340 350 fg0241 THYRLELMEKDLCVKGWNWGTVKFGGESWGRLRFGEEDRVKGFSLLLVLLFSLCHCLWFP :::::::::::::::::::::::::: gi|730 THYRLELMEKDLCVKGWNWGTVKFGG---------------------------------- 100 110 360 370 380 390 400 410 fg0241 IYLHVHHVFIEYLQYTAWGWGYSLNRLTAVSCLCGTQFGGNIAYADLRGGACGWISPFLT gi|730 ------------------------------------------------------------ 420 430 440 450 460 470 fg0241 GQLLSFDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|730 -QLLSFDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGV 120 130 140 150 160 170 480 490 500 510 520 530 fg0241 DPVEVRLPLVALAADGAEQALAGLGAGPAAWLPICAFAGLCPECVVKGGCNPGHGRCHLH :::: :.: . .: . ..: : :: : : .:.. : gi|730 DPVE------AFAQNVLSKADVIQATGDA----ICIFREL--QCLTPRGRYDIRIYPTFL 180 190 200 210 220 540 fg0241 LPGAAVSDSSWSL gi|730 HLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDI 230 240 250 260 270 280 >>gi|151554654|gb|AAI49986.1| SSRP1 protein [Bos taurus] (709 aa) initn: 788 init1: 788 opt: 788 Z-score: 873.0 bits: 171.7 E(): 5.5e-40 Smith-Waterman score: 1014; 59.561% identity (62.382% similar) in 319 aa overlap (205-523:1-212) 180 190 200 210 220 230 fg0241 HSGVGAQLPVYLVSLVQPGALPRPPQAGVDMAETLEFNDVYQEVKGSMNDGRLRLSRQGI :::::::::::::::::::::::::::::: gi|151 MAETLEFNDVYQEVKGSMNDGRLRLSRQGI 10 20 30 240 250 260 270 280 290 fg0241 IFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 IFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFK 40 50 60 70 80 90 300 310 320 330 340 350 fg0241 THYRLELMEKDLCVKGWNWGTVKFGGESWGRLRFGEEDRVKGFSLLLVLLFSLCHCLWFP :::::::::::::::::::::::::: gi|151 THYRLELMEKDLCVKGWNWGTVKFGG---------------------------------- 100 110 360 370 380 390 400 410 fg0241 IYLHVHHVFIEYLQYTAWGWGYSLNRLTAVSCLCGTQFGGNIAYADLRGGACGWISPFLT gi|151 ------------------------------------------------------------ 420 430 440 450 460 470 fg0241 GQLLSFDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 -QLLSFDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGV 120 130 140 150 160 170 480 490 500 510 520 530 fg0241 DPVEVRLPLVALAADGAEQALAGLGAGPAAWLPICAFAGLCPECVVKGGCNPGHGRCHLH :::: :.: . .: . ..: : :: : : .:.. : gi|151 DPVE------AFAQNVLSKADVIQATGDA----ICIFREL--QCLTPRGRYDIRIYPTFL 180 190 200 210 220 540 fg0241 LPGAAVSDSSWSL gi|151 HLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDI 230 240 250 260 270 280 >>gi|73982285|ref|XP_859991.1| PREDICTED: similar to str (711 aa) initn: 788 init1: 788 opt: 788 Z-score: 873.0 bits: 171.7 E(): 5.5e-40 Smith-Waterman score: 1014; 59.561% identity (62.382% similar) in 319 aa overlap (205-523:1-212) 180 190 200 210 220 230 fg0241 HSGVGAQLPVYLVSLVQPGALPRPPQAGVDMAETLEFNDVYQEVKGSMNDGRLRLSRQGI :::::::::::::::::::::::::::::: gi|739 MAETLEFNDVYQEVKGSMNDGRLRLSRQGI 10 20 30 240 250 260 270 280 290 fg0241 IFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 IFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFK 40 50 60 70 80 90 300 310 320 330 340 350 fg0241 THYRLELMEKDLCVKGWNWGTVKFGGESWGRLRFGEEDRVKGFSLLLVLLFSLCHCLWFP :::::::::::::::::::::::::: gi|739 THYRLELMEKDLCVKGWNWGTVKFGG---------------------------------- 100 110 360 370 380 390 400 410 fg0241 IYLHVHHVFIEYLQYTAWGWGYSLNRLTAVSCLCGTQFGGNIAYADLRGGACGWISPFLT gi|739 ------------------------------------------------------------ 420 430 440 450 460 470 fg0241 GQLLSFDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 -QLLSFDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGV 120 130 140 150 160 170 480 490 500 510 520 530 fg0241 DPVEVRLPLVALAADGAEQALAGLGAGPAAWLPICAFAGLCPECVVKGGCNPGHGRCHLH :::: :.: . .: . ..: : :: : : .:.. : gi|739 DPVE------AFAQNVLSKADVIQATGDA----ICIFREL--QCLTPRGRYDIRIYPTFL 180 190 200 210 220 540 fg0241 LPGAAVSDSSWSL gi|739 HLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDI 230 240 250 260 270 280 >>gi|194218091|ref|XP_001497140.2| PREDICTED: structure (606 aa) initn: 787 init1: 787 opt: 787 Z-score: 872.8 bits: 171.4 E(): 5.7e-40 Smith-Waterman score: 1013; 59.248% identity (62.382% similar) in 319 aa overlap (205-523:1-212) 180 190 200 210 220 230 fg0241 HSGVGAQLPVYLVSLVQPGALPRPPQAGVDMAETLEFNDVYQEVKGSMNDGRLRLSRQGI :::::::::.:::::::::::::::::::: gi|194 MAETLEFNDIYQEVKGSMNDGRLRLSRQGI 10 20 30 240 250 260 270 280 290 fg0241 IFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 IFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFK 40 50 60 70 80 90 300 310 320 330 340 350 fg0241 THYRLELMEKDLCVKGWNWGTVKFGGESWGRLRFGEEDRVKGFSLLLVLLFSLCHCLWFP :::::::::::::::::::::::::: gi|194 THYRLELMEKDLCVKGWNWGTVKFGG---------------------------------- 100 110 360 370 380 390 400 410 fg0241 IYLHVHHVFIEYLQYTAWGWGYSLNRLTAVSCLCGTQFGGNIAYADLRGGACGWISPFLT gi|194 ------------------------------------------------------------ 420 430 440 450 460 470 fg0241 GQLLSFDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 -QLLSFDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGV 120 130 140 150 160 170 480 490 500 510 520 530 fg0241 DPVEVRLPLVALAADGAEQALAGLGAGPAAWLPICAFAGLCPECVVKGGCNPGHGRCHLH :::: :.: . .: . ..: : :: : : .:.. : gi|194 DPVE------AFAQNVLSKADVIQATGDA----ICIFREL--QCLTPRGRYDIRIYPTFL 180 190 200 210 220 540 fg0241 LPGAAVSDSSWSL gi|194 HLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDI 230 240 250 260 270 280 >>gi|109106294|ref|XP_001103334.1| PREDICTED: similar to (709 aa) initn: 787 init1: 787 opt: 787 Z-score: 871.9 bits: 171.5 E(): 6.3e-40 Smith-Waterman score: 1013; 59.248% identity (62.382% similar) in 319 aa overlap (205-523:1-212) 180 190 200 210 220 230 fg0241 HSGVGAQLPVYLVSLVQPGALPRPPQAGVDMAETLEFNDVYQEVKGSMNDGRLRLSRQGI :::::::::.:::::::::::::::::::: gi|109 MAETLEFNDIYQEVKGSMNDGRLRLSRQGI 10 20 30 240 250 260 270 280 290 fg0241 IFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFK 40 50 60 70 80 90 300 310 320 330 340 350 fg0241 THYRLELMEKDLCVKGWNWGTVKFGGESWGRLRFGEEDRVKGFSLLLVLLFSLCHCLWFP :::::::::::::::::::::::::: gi|109 THYRLELMEKDLCVKGWNWGTVKFGG---------------------------------- 100 110 360 370 380 390 400 410 fg0241 IYLHVHHVFIEYLQYTAWGWGYSLNRLTAVSCLCGTQFGGNIAYADLRGGACGWISPFLT gi|109 ------------------------------------------------------------ 420 430 440 450 460 470 fg0241 GQLLSFDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 -QLLSFDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGV 120 130 140 150 160 170 480 490 500 510 520 530 fg0241 DPVEVRLPLVALAADGAEQALAGLGAGPAAWLPICAFAGLCPECVVKGGCNPGHGRCHLH :::: :.: . .: . ..: : :: : : .:.. : gi|109 DPVE------AFAQNVLSKADVIQATGDA----ICIFREL--QCLTPRGRYDIRIYPTFL 180 190 200 210 220 540 fg0241 LPGAAVSDSSWSL gi|109 HLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDI 230 240 250 260 270 280 547 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sat Aug 9 06:51:18 2008 done: Sat Aug 9 06:53:36 2008 Total Scan time: 896.420 Total Display time: 0.110 Function used was FASTA [version 34.26.5 April 26, 2007]