hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-07325352/chunk_1/iprscan-20080809-07325352.nocrc
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Query sequence: fg03134y1
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00225.13.ls Kinesin motor domain                           620.1   1.8e-183   1
PF00225.13.fs Kinesin motor domain                           618.4   5.7e-183   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00225.13.fs   1/1      50   375 ..     1   424 []   618.4 5.7e-183
PF00225.13.ls   1/1      50   375 ..     1   424 []   620.1 1.8e-183

Alignments of top-scoring domains:
PF00225.13.fs: domain 1 of 1, from 50 to 375: score 618.4, E = 5.7e-183
                   *->RvRPlnerEksrgssdvvnv....sedvessvitn.gkektFtFDkV
                      R+RP+n+rE++  ++ vv+v+  + ++ +++++ +++++k+FtFD  
   fg03134y1    50    RCRPMNQRERELRCQPVVTVdcarAQCCIQNPGAAdEPPKQFTFDGA 96   

                   FdpeatQelsepYAsqefvyestakplvesvleGyNvtIFAYGQTGSGKT
                   ++ +           +e++y+++a+plve v eGyN+tIFAYGQTGSGK+
   fg03134y1    97 YHVDHV---------TEQIYNEIAYPLVEGVTEGYNGTIFAYGQTGSGKS 137  

                   YTMeGstdsdksspnpsdsCttpeeepGiiPRaledlFerieerkerkpv
                   +TM+G +d              p++++GiiPRa+e++Fe++ ++ e+   
   fg03134y1   138 FTMQGLPD--------------PPSQRGIIPRAFEHVFESV-QCAEN--- 169  

                   fKPklnekgwellncqetligvsfdtrglsSdlyvedlefsvkvSylEIY
                                                         +f+v++SylEIY
   fg03134y1   170 -------------------------------------TKFLVRASYLEIY 182  

                   NEkirDLLspsppqrgspskdnekkkkkpLrireDpkrGgkmdgvyVkGL
                   NE +rDLL  +             +k+k L+++e+p++G     vyVkGL
   fg03134y1   183 NEDVRDLLGAD-------------TKQK-LELKEHPEKG-----VYVKGL 213  

                   teveVtsaeevlelLelGnknRtvasTkmNeeSSRSHaiFtitveqrntd
                   ++++V+s+ +  +++e G+knR+v+ T+mN+ SSRSH+iFti +e++  d
   fg03134y1   214 SMHTVHSVAQCEHIMETGWKNRSVGYTLMNKDSSRSHSIFTISIEMSAVD 263  

                   ttgsvvtgkdnsgeesvrvskLnLVDLAGSERaskTgatgAggrRLkEaa
                             ++g+++ r +kLnLVDLAGSER+skTg   A+g+RLkEa+
   fg03134y1   264 ----------ERGKDHLRAGKLNLVDLAGSERQSKTG---ATGERLKEAT 300  

                   nINkSLsaLGnVInALadnqkssHiPYRDSKLTrLLQDSLGGGDNsKTlM
                   +IN+SLsaLGnVI+AL+d+ + +H+PYRDSKLTrLLQDSLGG  N+KTlM
   fg03134y1   301 KINLSLSALGNVISALVDG-RCKHVPYRDSKLTRLLQDSLGG--NTKTLM 347  

                   IaniSPsssrNntnyeETLsTLrFAsRAKnIk<-*
                   +a++SP+++    ny+ETLsTLr+A+RAKnI+   
   fg03134y1   348 VACLSPADN----NYDETLSTLRYANRAKNIR    375  

PF00225.13.ls: domain 1 of 1, from 50 to 375: score 620.1, E = 1.8e-183
                   *->RvRPlnerEksrgssdvvnv....sedvessvitn.gkektFtFDkV
                      R+RP+n+rE++  ++ vv+v+  + ++ +++++ +++++k+FtFD  
   fg03134y1    50    RCRPMNQRERELRCQPVVTVdcarAQCCIQNPGAAdEPPKQFTFDGA 96   

                   FdpeatQelsepYAsqefvyestakplvesvleGyNvtIFAYGQTGSGKT
                   ++ +           +e++y+++a+plve v eGyN+tIFAYGQTGSGK+
   fg03134y1    97 YHVDHV---------TEQIYNEIAYPLVEGVTEGYNGTIFAYGQTGSGKS 137  

                   YTMeGstdsdksspnpsdsCttpeeepGiiPRaledlFerieerkerkpv
                   +TM+G +d              p++++GiiPRa+e++Fe++ ++ e+   
   fg03134y1   138 FTMQGLPD--------------PPSQRGIIPRAFEHVFESV-QCAEN--- 169  

                   fKPklnekgwellncqetligvsfdtrglsSdlyvedlefsvkvSylEIY
                                                         +f+v++SylEIY
   fg03134y1   170 -------------------------------------TKFLVRASYLEIY 182  

                   NEkirDLLspsppqrgspskdnekkkkkpLrireDpkrGgkmdgvyVkGL
                   NE +rDLL  +             +k+k L+++e+p++G     vyVkGL
   fg03134y1   183 NEDVRDLLGAD-------------TKQK-LELKEHPEKG-----VYVKGL 213  

                   teveVtsaeevlelLelGnknRtvasTkmNeeSSRSHaiFtitveqrntd
                   ++++V+s+ +  +++e G+knR+v+ T+mN+ SSRSH+iFti +e++  d
   fg03134y1   214 SMHTVHSVAQCEHIMETGWKNRSVGYTLMNKDSSRSHSIFTISIEMSAVD 263  

                   ttgsvvtgkdnsgeesvrvskLnLVDLAGSERaskTgatgAggrRLkEaa
                             ++g+++ r +kLnLVDLAGSER+skTg   A+g+RLkEa+
   fg03134y1   264 ----------ERGKDHLRAGKLNLVDLAGSERQSKTG---ATGERLKEAT 300  

                   nINkSLsaLGnVInALadnqkssHiPYRDSKLTrLLQDSLGGGDNsKTlM
                   +IN+SLsaLGnVI+AL+d+ + +H+PYRDSKLTrLLQDSLGG  N+KTlM
   fg03134y1   301 KINLSLSALGNVISALVDG-RCKHVPYRDSKLTRLLQDSLGG--NTKTLM 347  

                   IaniSPsssrNntnyeETLsTLrFAsRAKnIk<-*
                   +a++SP+++    ny+ETLsTLr+A+RAKnI+   
   fg03134y1   348 VACLSPADN----NYDETLSTLRYANRAKNIR    375  

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