hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-07325352/chunk_1/iprscan-20080809-07325352.nocrc
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Query sequence: fg03134y1
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00129                                                 623.0     1e-182   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00129     1/1      42   382 ..     1   404 []   623.0   1e-182

Alignments of top-scoring domains:
SM00129: domain 1 of 1, from 42 to 382: score 623.0, E = 1e-182
                   *->kgnIrVavRvdrdRPlnkrEksekakeespsvvtv.....tvtvn..
                       ++++V+vR+   RP n+rE++ +    ++ vvtv+  + ++ ++++
   fg03134y1    42    SEAVKVVVRC---RPMNQRERELR----CQPVVTVdcaraQCCIQnp 81   

                   .........FtFDkVFWrydvddpsasQedVFeevaaPLvdsaldGYNva
                   +  ++++++FtFD ++      + +  +e++++e+a+PLv+ + +GYN+ 
   fg03134y1    82 gaadeppkqFTFDGAY------HVDHVTEQIYNEIAYPLVEGVTEGYNG- 124  

                   TIFAYGQTGSGKTyTMsGtptdpgilsndladitpdepGiIPRaledlFe
                   TIFAYGQTGSGK++TM G p            ++p ++GiIPRa+e++Fe
   fg03134y1   125 TIFAYGQTGSGKSFTMQGLP------------DPPSQRGIIPRAFEHVFE 162  

                   kide.....fsVkvSylEIYNEkirDLLspspenSksrGkhakqsskkkL
                   ++++ ++++f+V++SylEIYNE +rDLL+ +               k+kL
   fg03134y1   163 SVQCaentkFLVRASYLEIYNEDVRDLLGADT--------------KQKL 198  

                   rirEdkngnrhdapkLtrlrgqggvyVvGLtevsVsSaeevlellerGnk
                   +++E++                 gvyV+GL++++V+S+++ ++++e G+k
   fg03134y1   199 ELKEHPE---------------KGVYVKGLSMHTVHSVAQCEHIMETGWK 233  

                   nRtvaaTkmNeeSSRSHaiFtitleqkeklepiadektesstnegteqik
                   nR+v+ T+mN +SSRSH+iFti +e+                + g++  +
   fg03134y1   234 NRSVGYTLMNKDSSRSHSIFTISIEMS------------AVDERGKDHLR 271  

                   sskLnLVDLAGSERaskTgseaeGdRLkEaqnINkSLlaLGnVInALadd
                    +kLnLVDLAGSER+skTg  a+G+RLkEa++IN+SL+aLGnVI+AL+d 
   fg03134y1   272 AGKLNLVDLAGSERQSKTG--ATGERLKEATKINLSLSALGNVISALVD- 318  

                   shdsaeseatkqaggkssHIPYRDSKLTrLLQdSLGGNsKTlMIanvSPs
                                 g+ +H+PYRDSKLTrLLQdSLGGN+KTlM+a++SP+
   fg03134y1   319 --------------GRCKHVPYRDSKLTRLLQDSLGGNTKTLMVACLSPA 354  

                   ssnyeETlsTLrFAsRaksIknkpavne<-*
                   + ny+ETlsTLr+A+Rak+I+nkp +ne   
   fg03134y1   355 DNNYDETLSTLRYANRAKNIRNKPRINE    382  

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