hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-08004894/chunk_1/iprscan-20090618-08004894.nocrc
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Query sequence: fg03474
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00322                                                 194.7    8.4e-54   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00322    1/3      83   151 ..     1    63 []    62.1  7.2e-14
SM00322    2/3     167   238 ..     1    63 []    63.6  2.6e-14
SM00322    3/3     307   377 ..     1    63 []    69.1  5.6e-16

Alignments of top-scoring domains:
SM00322: domain 1 of 3, from 83 to 151: score 62.1, E = 7.2e-14
                   *->a.vtiev.ipadkvGriIGkgGstIkkieeetgvkIdipg....ert
                       + t+++  + + vG+iIGk+G+t+k+i+e++ ++I i++++ +er+
     fg03474    83    ItLTLRMlMHGKEVGSIIGKKGETVKRIREQSSARITISEgscpERI 129  

                   vtItGppenvekAkelileile<-*
                    tItG+ ++v +A+ +i+ +l    
     fg03474   130 TTITGSTAAVFHAVSMIAFKLD    151  

SM00322: domain 2 of 3, from 167 to 238: score 63.6, E = 2.6e-14
                   *->a.vtiev.ipadkvGriIGkgGstIkkieeetgvkIdipg.......
                       +vt+++ ipa+++G++IGk G  Ik+i+e tg+++++ g+  ++++
     fg03474   167    PpVTLRLvIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGdllpnst 213  

                   ertvtItGppenvekAkelileile<-*
                   er vt++G p+++ +++++i++++    
     fg03474   214 ERAVTVSGVPDAIILCVRQICAVIL    238  

SM00322: domain 3 of 3, from 307 to 377: score 69.1, E = 5.6e-16
                   *->a.vtiev.ipadkvGriIGkgGstIkkieeetgvkIdipg......e
                       + ++e+ +p+d++G +IG++Gs I +i++++g++I+i +  ++ +e
     fg03474   307    QtSSQEFlVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNqaegagE 353  

                   rtvtItGppenvekAkelileile<-*
                   r+vtItG+p  +++A++li + le   
     fg03474   354 RHVTITGSPVSIALAQYLITACLE    377  

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