hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-08254826/chunk_1/iprscan-20080809-08254826.nocrc
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Query sequence: fg04050
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00630                                                 663.1   8.4e-195   1
SM00423                                                  45.8    5.5e-09   1
SM00409                                                  31.0    0.00017   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00630    1/1     154   582 ..     1   532 []   663.1 8.4e-195
SM00423    1/1     600   652 ..     1    56 []    45.8  5.5e-09
SM00409    1/1     663   747 ..     1    58 []    31.0  0.00017

Alignments of top-scoring domains:
SM00630: domain 1 of 1, from 154 to 582: score 663.1, E = 8.4e-195
                   *->fnhllldedsgierlyVGArNriysLslpnlsllsevvtgpvldwps
                      f +l l e +g   lyVGAr++++++s++ l+l      + +++w++
     fg04050   154    FLTLTLTEPTG--LLYVGAREALFAFSMEALEL------QGAISWEA 192  

                   ceepnekclkceeCaakgkeeCssneteCdNyirvLlvdndhiadthLyv
                   + e      k++eC++kgk    +n+teC+N+ir+L+++n+    +hLyv
     fg04050   193 PVE------KKTECIQKGK----NNQTECFNFIRFLQPYNA----SHLYV 228  

                   CGTnafgPdVtCrlinlgdlepadeseaedqiltlclyskevnlsesgrg
                   CGT af+P  +C++ n+ +             +tl+++     ++e+g+g
     fg04050   229 CGTYAFQP--KCTYVNMLT-------------FTLEHG-----EFEDGKG 258  

                   kCPydPlgsstsvvvdggvPgggeLYsgtsadfsgvalsysssdpiifRs
                   kCPydP+   ++++vdg      eLYs+t ++f+g       ++pii+R+
     fg04050   259 KCPYDPAKGHAGLLVDG------ELYSATLNNFLG-------TEPIILRN 295  

                   lgttqdgfefefhslrttiydskwgydlnepnFVyaFeipes.g....dg
                   +g          h++++t+y  +w   lnep+FV+++++pes g+ ++d+
     fg04050   296 MG---------PHHSMKTEYLAFW---LNEPHFVGSAYVPESvGsftgDD 333  

                   dfVYFFFrEtaveainrdcssekavvsRVARvCknDvGGqrlLqkkWtSF
                   d+VYFFFrE+ave+    ++++ +vv+RVARvCk+D+GG r+Lq kWt+F
     fg04050   334 DKVYFFFRERAVES----DCYAEQVVARVARVCKGDMGGARTLQRKWTTF 379  

                   LKarLnCsvpgkggvrefyFneLQavfllppGaLArelgiesddvlYgVF
                   LKarL Cs p++      yFn+LQa++ l++     +++   ++ ++gVF
     fg04050   380 LKARLACSAPNWQL----YFNQLQAMHTLQD----TSWH---NTTFFGVF 418  

                   sqgqqtssrdaanpipgSAVCaFslkdInavFneGpfkcyegpnsawlpv
                      +q++       ++  A+C ++l +I++vF+ Gp+k+y+ + ++w ++
     fg04050   419 Q--AQWGD----MYLS--AICEYQLEEIQRVFE-GPYKEYHEEAQKWDRY 459  

                   egnkvPyprPGtCisntfregrndssskdlPddvlnfikdhpLmdeavpP
                   ++ +vP+prPG+Ci+n++r+ ++++ss+ lPd++lnf+k+hpLm+e v P
     fg04050   460 TD-PVPSPRPGSCINNWHRR-HGYTSSLELPDNILNFVKKHPLMEEQVGP 507  

                   ltgrPllvktgtdyrlTsiaVdrvrgldGgkneytVlFlGTsdGrvlKvv
                    ++rPllvk+  ++++T++++drv+gldG +  ytVlF+GT dG++lK+v
     fg04050   508 RWSRPLLVKK--GTNFTHLVADRVTGLDGAT--YTVLFIGTGDGWLLKAV 553  

                   vsrsssssssaglesvlleelqvfppgsepirdmvlsskk<-*
                   +         +g++++l+eelq+f+   ep r++vls++k   
     fg04050   554 S---------LGPWVHLIEELQLFD-Q-EPMRSLVLSQSK    582  

SM00423: domain 1 of 1, from 600 to 652: score 45.8, E = 5.5e-09
                   *->rCsqygvtsCseCllardpygCgWCssegrCtrg...erCderrgsr
                      +C +y  +sC++C+lardpy C+W ++++rC++ ++++       ++
     fg04050   600    DCMKY--RSCADCVLARDPY-CAWSVNTSRCVAVgghSGSL----LI 639  

                   qnwssg.pssqCp<-*
                   q+++  ++s  C    
     fg04050   640 QHVMTSdTSGICN    652  

SM00409: domain 1 of 1, from 663 to 747: score 31.0, E = 0.00017
                   *->pp.vtvkeGesvtLtC.as....titWy...................
                      p+++tv++G +++L+C+ s++  + +W+ ++++ +  ++++   + +
     fg04050   663    PKnITVVAGTDLVLPChLSsnlaHARWTfggrdlpaeqpgsflydar 709  

                   ...LtI.nvtpeDsesgGtYtCaat...sgsasseqgttLtVl<-*
                    + L++  ++p ++   G Y C  +  ++  a    g  + V    
     fg04050   710 lqaLVVmAAQPRHA---GAYHCFSEeqgARLAAE--GYLVAVV    747  

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