hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/TIGRFAMs_HMM.LIB.bin Sequence file: /db/iprscan/tmp/20090618/iprscan-20090618-08072797/chunk_1/iprscan-20090618-08072797.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: fg04316 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TIGR00109 hemH: ferrochelatase 442.4 2e-130 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TIGR00109 1/1 96 422 .. 1 339 [] 442.4 2e-130 Alignments of top-scoring domains: TIGR00109: domain 1 of 1, from 96 to 422: score 442.4, E = 2e-130 *->tkrkKtGvLLlNlGgPdkPkleeverfLkqlfaDpriidisrakwrK + +KtG+L lN+GgP+ +l +v +fL lf D+++ +++ + fg04316 96 KRKPKTGILMLNMGGPE--TLGDVHDFLLRLFLDRDLMTLP---IQN 137 llakmIlpLRskKiaKnYeeIGtEGgSPLlqIteqQaeaLekrLdkeiqe la I++ R++Ki+ +Y+ IG GgSP+ +t Q e k+Ld + fg04316 138 KLAPFIAKRRTPKIQEQYRRIG--GGSPIKIWTSKQGEGMVKLLDELSPN 185 eidakvyiaMrYgePfteeAVkellkdgVerlVvlpLYPhFSsSTtgSsf ++++k+yi++rY +P+teeA +e+ dg+er++++ +YP++S+STtgSs fg04316 186 TAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSL 235 nel...aealkklrslRslkisvIeswydnekyikaladsIketLkkfpe n+ + ++ +++++ k+s I++w++++ +i+ +ad I+++L fp fg04316 236 NAIyryYNQVGRKPTM---KWSTIDRWPTHHLLIQCFADHILKELDHFPL 282 peRDkavLlFSaHGlPqsyvdeAGDpYpaeceattrliaekLglKNTapn R +v+lFSaH+lP+s+v+ GDpYp+e+ at+ ++e L n fg04316 283 EKRSEVVILFSAHSLPMSVVNR-GDPYPQEVSATVQKVMERLE----YCN 327 eyrltyQSErvGPepWLgPyTeElleklgekgvdhivvvPigFtaDhlET +yrl++QS +vGP+pWLgP+T+E ++ l e g i+ vPi+Ft+Dh+ET fg04316 328 PYRLVWQS-KVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIET 376 LyEiDeey.RevaeeaGgkkYqriPaLNakpeFIealAelVlkkle<-* LyE+D+ey+ + a e G+ + r ++LN++p F alA+lV ++ + fg04316 377 LYELDIEYsQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQ 422 //