hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080809/iprscan-20080809-08521541/chunk_1/iprscan-20080809-08521541.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: fg04853 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00454.17.ls Phosphatidylinositol 3- and 4-kinase 341.0 1.9e-99 1 PF00454.17.fs Phosphatidylinositol 3- and 4-kinase 339.3 6e-99 1 PF00792.14.ls Phosphoinositide 3-kinase C2 189.1 9.6e-54 1 PF00792.14.fs Phosphoinositide 3-kinase C2 187.4 3.3e-53 1 PF00794.9.ls PI3-kinase family, ras-binding domain 160.7 3.5e-45 1 PF00794.9.fs PI3-kinase family, ras-binding domain 158.8 1.3e-44 1 PF00613.10.fs Phosphoinositide 3-kinase family, acce 102.9 4.3e-30 1 PF00613.10.ls Phosphoinositide 3-kinase family, acce 106.1 9.5e-29 1 PF00787.14.fs PX domain 95.3 1.4e-28 1 PF00168.20.fs C2 domain 97.6 1.8e-28 1 PF00168.20.ls C2 domain 99.6 8.4e-27 1 PF00787.14.ls PX domain 97.1 4.8e-26 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00794.9.ls 1/1 375 477 .. 1 116 [] 160.7 3.5e-45 PF00794.9.fs 1/1 375 477 .. 1 116 [] 158.8 1.3e-44 PF00792.14.ls 1/1 659 799 .. 1 179 [] 189.1 9.6e-54 PF00792.14.fs 1/1 659 799 .. 1 179 [] 187.4 3.3e-53 PF00613.10.ls 1/1 816 1003 .. 1 213 [] 106.1 9.5e-29 PF00613.10.fs 1/1 822 1003 .. 7 213 .] 102.9 4.3e-30 PF00454.17.ls 1/1 1088 1303 .. 1 329 [] 341.0 1.9e-99 PF00454.17.fs 1/1 1088 1303 .. 1 329 [] 339.3 6e-99 PF00787.14.ls 1/1 1376 1488 .. 1 131 [] 97.1 4.8e-26 PF00787.14.fs 1/1 1376 1488 .. 1 131 [] 95.3 1.4e-28 PF00168.20.fs 1/1 1530 1619 .. 1 88 [] 97.6 1.8e-28 PF00168.20.ls 1/1 1530 1619 .. 1 88 [] 99.6 8.4e-27 Alignments of top-scoring domains: PF00794.9.ls: domain 1 of 1, from 375 to 477: score 160.7, E = 3.5e-45 *->astlsPeplpnKlinnkllisvhlekrvknkqqtkTltcnpnsTpes a+t+sPe+l ++ +l+++v+++ + q++ T+tcn++sT++ fg04853 375 AVTPSPEHLG---DEVNLKVTVLCD----RLQEALTFTCNCSSTVDL 414 liaqaltKfakklsvltqndvtdeedYvLKVcGrdEYLlgdhpLgqfeyI li+q+l++ ++++l+++dv+ d+vLK+cG++E+L+++h+Lg++eyI fg04853 415 LIYQTLCY---THDDLRNVDVG---DFVLKPCGLEEFLQNKHALGSHEYI 458 rnclksgrephLvLvesss<-* ++c+k++ +++L+L+e++ fg04853 459 QYCRKFDIDIRLQLMEQKV 477 PF00794.9.fs: domain 1 of 1, from 375 to 477: score 158.8, E = 1.3e-44 *->astlsPeplpnKlinnkllisvhlekrvknkqqtkTltcnpnsTpes a+t+sPe+l ++ +l+++v+++ + q++ T+tcn++sT++ fg04853 375 AVTPSPEHLG---DEVNLKVTVLCD----RLQEALTFTCNCSSTVDL 414 liaqaltKfakklsvltqndvtdeedYvLKVcGrdEYLlgdhpLgqfeyI li+q+l++ ++++l+++dv+ d+vLK+cG++E+L+++h+Lg++eyI fg04853 415 LIYQTLCY---THDDLRNVDVG---DFVLKPCGLEEFLQNKHALGSHEYI 458 rnclksgrephLvLvesss<-* ++c+k++ +++L+L+e++ fg04853 459 QYCRKFDIDIRLQLMEQKV 477 PF00792.14.ls: domain 1 of 1, from 659 to 799: score 189.1, E = 9.6e-54 *->kysdlyvecslyDghggkpLclpvqsTsykpfskSlldgffssvkWn +y+d+y++csl+ hggk Lc+p+ +T++++fs +++f+ ++W+ fg04853 659 SYEDFYLSCSLS--HGGKELCSPL-QTRRAHFS----KYLFHLIVWD 698 ewltFprikisdLPrdArLvltlyeisgksksesstdeiKldaneskkv. ++++Fp ++++ LPr++ L+ tly++ ++ +++ss +an++++v+ fg04853 699 QQICFP-VQVNRLPRETLLCATLYALPIPPPGSSS------EANKQRRVp 741 eplGwvnlsLFdkekgiLrqGpqlLsltWpskepdgsvptsTPGKvqlal e+lGwv+++LF++ +++L++G++lL l Wp ++ ++s ++s fg04853 742 EALGWVTTPLFNF-RQVLTCGRKLLGL-WPATQENPSARWS--------- 780 rdelnrLekllkkyerGdvqsnpvvdwlDfltl<-* +++++++ s v++++Df+t+ fg04853 781 ------------APNFHQPDS--VILQIDFPTS 799 PF00792.14.fs: domain 1 of 1, from 659 to 799: score 187.4, E = 3.3e-53 *->kysdlyvecslyDghggkpLclpvqsTsykpfskSlldgffssvkWn +y+d+y++csl+ hggk Lc+p+ +T++++fs +++f+ ++W+ fg04853 659 SYEDFYLSCSLS--HGGKELCSPL-QTRRAHFS----KYLFHLIVWD 698 ewltFprikisdLPrdArLvltlyeisgksksesstdeiKldaneskkv. ++++Fp ++++ LPr++ L+ tly++ ++ +++ss +an++++v+ fg04853 699 QQICFP-VQVNRLPRETLLCATLYALPIPPPGSSS------EANKQRRVp 741 eplGwvnlsLFdkekgiLrqGpqlLsltWpskepdgsvptsTPGKvqlal e+lGwv+++LF++ +++L++G++lL l Wp ++ ++s ++s fg04853 742 EALGWVTTPLFNF-RQVLTCGRKLLGL-WPATQENPSARWS--------- 780 rdelnrLekllkkyerGdvqsnpvvdwlDfltl<-* +++++++ s v++++Df+t+ fg04853 781 ------------APNFHQPDS--VILQIDFPTS 799 PF00613.10.ls: domain 1 of 1, from 816 to 1003: score 106.1, E = 9.5e-29 *->kdlkpNlnekerkeleaIlayDPlskLtaeEkdLiWkfRhysltsnP + + l+e++ + l++I+ + l+ Lt +k+ +W R y+++s+ fg04853 816 RYEFGSLREEDQRKLKDIMQKESLYWLTDADKKRLWEKR-YYCHSEV 861 kALtLmCVGPKlLlL....SVkWsdlsevaealsLldkRvWapidpvdAL +L+ L+L + +S +W l + + Ll+ W+ dAL fg04853 862 SSLP--------LVLasapSWEWACLP---DIYVLLKQ--WTHMNHQDAL 898 ELLdpkFadkteeVReYAVkcLesYasDeELlfYLLQLVQALKYEnldep LL ++F+d +eVR+ AV+ + s +sD+ELl+YL+QLVQALKYE fg04853 899 GLLHATFPD--QEVRRMAVQWIGS-LSDAELLDYLPQLVQALKYE----C 941 fhdSpLsrFLlqRAlkNrsrlGHfFfWyLksEiYkDdeghdkdvIserFg ++dSpL+rFLl+RA + r H FfW Lk + +d+ + s r+ fg04853 942 YLDSPLVRFLLKRAVSDL-RVTHYFFWLLKDGL------KDSQF-SIRYQ 983 vllEsylrecdstsleglnk<-* ll ++l c+ + +e++n+ fg04853 984 YLLAALLCCCGKGLREEFNR 1003 PF00613.10.fs: domain 1 of 1, from 822 to 1003: score 102.9, E = 4.3e-30 *->lnekerkeleaIlayDPlskLtaeEkdLiWkfRhysltsnPkALtLm l+e++ + l++I+ + l+ Lt +k+ +W R y+++s+ +L+ fg04853 822 LREEDQRKLKDIMQKESLYWLTDADKKRLWEKR-YYCHSEVSSLP-- 865 CVGPKlLlL....SVkWsdlsevaealsLldkRvWapidpvdALELLdpk L+L + +S +W l + + Ll+ W+ dAL LL ++ fg04853 866 ------LVLasapSWEWACLP---DIYVLLKQ--WTHMNHQDALGLLHAT 904 FadkteeVReYAVkcLesYasDeELlfYLLQLVQALKYEnldepfhdSpL F+d +eVR+ AV+ + s +sD+ELl+YL+QLVQALKYE ++dSpL fg04853 905 FPD--QEVRRMAVQWIGS-LSDAELLDYLPQLVQALKYE----CYLDSPL 947 srFLlqRAlkNrsrlGHfFfWyLksEiYkDdeghdkdvIserFgvllEsy +rFLl+RA + r H FfW Lk + +d+ + s r+ ll ++ fg04853 948 VRFLLKRAVSDL-RVTHYFFWLLKDGL------KDSQF-SIRYQYLLAAL 989 lrecdstsleglnk<-* l c+ + +e++n+ fg04853 990 LCCCGKGLREEFNR 1003 PF00454.17.ls: domain 1 of 1, from 1088 to 1303: score 341.0, E = 1.9e-99 *->gypfifKgGdDLrsrQDelvlQligVfKPkDEEPyApnNPkgtkvsq ++++ifK+GdDLr QD+l+lQ+i fg04853 1088 NIRVIFKCGDDLR--QDMLTLQMI----------------------- 1109 GerlmnkllkgegldrrRnlqltaYlviplgpgsGlIEwvpnsttlaeil r+m k++++egld r + ++++ ++g g+G++E++pn++tl++i+ fg04853 1110 --RIMSKIWVQEGLDMR----MVIFRCFSTGRGRGMVEMIPNAETLRKIQ 1153 rtymvkkaikdfnksrffkdkkttkkleknakllkehkllqmvldrkqlt +++v++++kd fg04853 1154 VEHGVTGSFKD--------------------------------------- 1164 llekvevFeeklsntpkpgllqwFvkknpdaapyeewfeRfardnfvrSc + l +w+ k+np + +e+ + a +nf++Sc fg04853 1165 -----------------RPLADWLQKHNPGE---DEYEK--AVENFIYSC 1192 AgmsvldYiLGigDRHldNiLvkkndkktGklfHIDFGlcfghvkgkrgp Ag++v++Y+LGi+DRH+dNi++ k+tG++fHIDFG ++gh+++++ + fg04853 1193 AGCCVATYVLGICDRHNDNIML----KTTGHMFHIDFGRFLGHAQMFGNI 1238 kpervPFrLTrWPQaklpmveamggyiasLgpsgdeglFrelceeayral k++r PF++T +m ++++g++ +ps+ ++ F +lc++ay+++ fg04853 1239 KRDRAPFVFTS------DMAYVINGGD---KPSSRFHDFVDLCCQAYNLI 1279 RrnanlllnlLkkkAvarGelmledglpdwrs<-* R++++l+lnlL lml g+p++++ fg04853 1280 RKHTHLFLNLL--------GLMLSCGIPELSD 1303 PF00454.17.fs: domain 1 of 1, from 1088 to 1303: score 339.3, E = 6e-99 *->gypfifKgGdDLrsrQDelvlQligVfKPkDEEPyApnNPkgtkvsq ++++ifK+GdDLr QD+l+lQ+i fg04853 1088 NIRVIFKCGDDLR--QDMLTLQMI----------------------- 1109 GerlmnkllkgegldrrRnlqltaYlviplgpgsGlIEwvpnsttlaeil r+m k++++egld r + ++++ ++g g+G++E++pn++tl++i+ fg04853 1110 --RIMSKIWVQEGLDMR----MVIFRCFSTGRGRGMVEMIPNAETLRKIQ 1153 rtymvkkaikdfnksrffkdkkttkkleknakllkehkllqmvldrkqlt +++v++++kd fg04853 1154 VEHGVTGSFKD--------------------------------------- 1164 llekvevFeeklsntpkpgllqwFvkknpdaapyeewfeRfardnfvrSc + l +w+ k+np + +e+ + a +nf++Sc fg04853 1165 -----------------RPLADWLQKHNPGE---DEYEK--AVENFIYSC 1192 AgmsvldYiLGigDRHldNiLvkkndkktGklfHIDFGlcfghvkgkrgp Ag++v++Y+LGi+DRH+dNi++ k+tG++fHIDFG ++gh+++++ + fg04853 1193 AGCCVATYVLGICDRHNDNIML----KTTGHMFHIDFGRFLGHAQMFGNI 1238 kpervPFrLTrWPQaklpmveamggyiasLgpsgdeglFrelceeayral k++r PF++T +m ++++g++ +ps+ ++ F +lc++ay+++ fg04853 1239 KRDRAPFVFTS------DMAYVINGGD---KPSSRFHDFVDLCCQAYNLI 1279 RrnanlllnlLkkkAvarGelmledglpdwrs<-* R++++l+lnlL lml g+p++++ fg04853 1280 RKHTHLFLNLL--------GLMLSCGIPELSD 1303 PF00787.14.ls: domain 1 of 1, from 1376 to 1488: score 97.1, E = 4.8e-26 *->dpilivvvvdpetsrkkegdkkhtyyvyevttktn.kewsVkRRYsd ++i+ v ++ e++ +++ k++ yv++v +++ ++ + R +++ fg04853 1376 GRISDVFLCRHEKI---FHPNKGYIYVVKVMRENThEATYIQRTFEE 1419 FeeLhekLlrkfpgrilPplPpKklfgryrkeslpmtsvwhssnnfdeef F+eLh kL+ fp ++lP +P++ ++gr+ e++ fg04853 1420 FQELHNKLRLLFPSSHLPSFPSRFVIGRS----------------RGEAV 1453 iekRrkgLeeyLqrllqhPelsnesevvleFLesd<-* +e+Rr+ L+ y+ +l++ P+++ e+++v++F+++ fg04853 1454 AERRREELNGYIWHLIHAPPEVAECDLVYTFFHPL 1488 PF00787.14.fs: domain 1 of 1, from 1376 to 1488: score 95.3, E = 1.4e-28 *->dpilivvvvdpetsrkkegdkkhtyyvyevttktn.kewsVkRRYsd ++i+ v ++ e++ +++ k++ yv++v +++ ++ + R +++ fg04853 1376 GRISDVFLCRHEKI---FHPNKGYIYVVKVMRENThEATYIQRTFEE 1419 FeeLhekLlrkfpgrilPplPpKklfgryrkeslpmtsvwhssnnfdeef F+eLh kL+ fp ++lP +P++ ++gr+ e++ fg04853 1420 FQELHNKLRLLFPSSHLPSFPSRFVIGRS----------------RGEAV 1453 iekRrkgLeeyLqrllqhPelsnesevvleFLesd<-* +e+Rr+ L+ y+ +l++ P+++ e+++v++F+++ fg04853 1454 AERRREELNGYIWHLIHAPPEVAECDLVYTFFHPL 1488 PF00168.20.fs: domain 1 of 1, from 1530 to 1619: score 97.6, E = 1.8e-28 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkd.qkkkTkvikkt L + v+ ++L + + +DPYVk+yl++d+++++k+kTkv++kt fg04853 1530 LFIMVMHIRGLQLLQ-DGNDPDPYVKIYLLPDPQKtTKRKTKVARKT 1575 lNPvWNEtFtFe.vpppdlqe.tLeieVyDydrfgrddflGevs<-* +NP++NE+++++++p dlq+++L+++V + f+ + +lGev+ fg04853 1576 CNPTYNEMLVYDgIPKGDLQQrELQLSVLSEQGFWENVLLGEVN 1619 PF00168.20.ls: domain 1 of 1, from 1530 to 1619: score 99.6, E = 8.4e-27 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkd.qkkkTkvikkt L + v+ ++L + + +DPYVk+yl++d+++++k+kTkv++kt fg04853 1530 LFIMVMHIRGLQLLQ-DGNDPDPYVKIYLLPDPQKtTKRKTKVARKT 1575 lNPvWNEtFtFe.vpppdlqe.tLeieVyDydrfgrddflGevs<-* +NP++NE+++++++p dlq+++L+++V + f+ + +lGev+ fg04853 1576 CNPTYNEMLVYDgIPKGDLQQrELQLSVLSEQGFWENVLLGEVN 1619 //