hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-09343244/chunk_1/iprscan-20080809-09343244.nocrc
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Query sequence: fg06182
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00109                                                  35.6    6.7e-06   1
SM00314                                                  31.8    9.4e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00109    1/1     125   172 ..     1    61 []    35.6  6.7e-06
SM00314    1/1     274   351 ..     1   102 []    31.8  9.4e-05

Alignments of top-scoring domains:
SM00109: domain 1 of 1, from 125 to 172: score 35.6, E = 6.7e-06
                   *->Hkfvfrtf..kptfCdvCrksiwgsfkqaaksqglrCseCkvkcHkk
                      H f +   +++p +Cd+C+  +           +lrC++Ck++cH  
     fg06182   125    HCFAELVLpgGPGWCDLCGREVLRQ--------ALRCTNCKFTCHPE 163  

                   CaekvpaqshksglsC<-*
                   C + +++       +C   
     fg06182   164 CRSLIQL-------DC    172  

SM00314: domain 1 of 1, from 274 to 351: score 31.8, E = 9.4e-05
                   *->dtyvlrVyvddlsavdpgqtyktlrvskrtTardViqqllekfhltd
                      +t++ r+++ +++     ++ k+l++s++tT+++Viq ll+kf + d
     fg06182   274    ATTDKRTSFYLPL-----DAIKQLHISSTTTVSEVIQGLLKKFMVVD 315  

                   edpeeYvLvevlp.sggkErvLlddenPlqlqklwprdaksprqsslrFv
                    +p++++L+ + ++ g++ r+ +++  ++ l                   
     fg06182   316 -NPQKFALFKRIHkDGQGRRKSEPNQTVPFLPVS---------------- 348  

                   Lrkrdd<-*
                      ++    
     fg06182   349 ---KPT    351  

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