hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090525/iprscan-20090525-14051094/chunk_1/iprscan-20090525-14051094.nocrc
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Query sequence: fg06273
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00097.15.fs Zinc finger, C3HC4 type (RING finger)           37.4    9.8e-13   1
PF00097.15.ls Zinc finger, C3HC4 type (RING finger)           39.2    1.3e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00097.15.fs   1/1     287   327 ..     1    50 []    37.4  9.8e-13
PF00097.15.ls   1/1     287   327 ..     1    50 []    39.2  1.3e-08

Alignments of top-scoring domains:
PF00097.15.fs: domain 1 of 1, from 287 to 327: score 37.4, E = 9.8e-13
                   *->CrICleelkepsndfplilpCgHsGslkyfCrsClerwlsssgnttC
                      C+IClee++e    ++ ++ C+H      f+r C+  wl     +tC
     fg06273   287    CAICLEEFSEGQ--ELRVISCLHE-----FHRNCVDPWLH--QHRTC 324  

                   plC<-*
                   plC   
     fg06273   325 PLC    327  

PF00097.15.ls: domain 1 of 1, from 287 to 327: score 39.2, E = 1.3e-08
                   *->CrICleelkepsndfplilpCgHsGslkyfCrsClerwlsssgnttC
                      C+IClee++e    ++ ++ C+H      f+r C+  wl     +tC
     fg06273   287    CAICLEEFSEGQ--ELRVISCLHE-----FHRNCVDPWLH--QHRTC 324  

                   plC<-*
                   plC   
     fg06273   325 PLC    327  

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