hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20090525/iprscan-20090525-14051094/chunk_1/iprscan-20090525-14051094.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: fg06273 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00184 41.2 1.4e-07 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00184 1/1 287 327 .. 1 23 [] 41.2 1.4e-07 Alignments of top-scoring domains: SM00184: domain 1 of 1, from 287 to 327: score 41.2, E = 1.4e-07 *->CpICle.......pvvlpCgH.FCr.Ci.........CPlC<-* C+ICle+ +++++++v+ C H+F+r+C++++ +++++CPlC fg06273 287 CAICLEefsegqeLRVISCLHeFHRnCVdpwlhqhrtCPLC 327 //