hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080809/iprscan-20080809-09472207/chunk_1/iprscan-20080809-09472207.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: fg06458 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00122.10.fs E1-E2 ATPase 156.7 2.6e-47 2 PF00122.10.ls E1-E2 ATPase 134.6 2.4e-37 1 PF00689.11.fs Cation transporting ATPase, C-terminu 120.1 6.9e-34 1 PF00689.11.ls Cation transporting ATPase, C-terminu 121.9 1.7e-33 1 PF00690.16.fs Cation transporter/ATPase, N-terminus 73.0 2.8e-20 1 PF00690.16.ls Cation transporter/ATPase, N-terminus 74.9 2.3e-19 1 PF00702.16.fs haloacid dehalogenase-like hydrolase 61.7 2.7e-17 2 PF00702.16.ls haloacid dehalogenase-like hydrolase 59.2 1.3e-14 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00690.16.fs 1/1 53 136 .. 1 87 [] 73.0 2.8e-20 PF00690.16.ls 1/1 53 136 .. 1 87 [] 74.9 2.3e-19 PF00122.10.ls 1/1 168 456 .. 1 245 [] 134.6 2.4e-37 PF00122.10.fs 1/2 205 293 .. 36 135 .. 91.7 1.3e-27 PF00122.10.fs 2/2 348 456 .. 148 245 .] 65.0 1.6e-19 PF00702.16.ls 1/1 460 808 .. 1 183 [] 59.2 1.3e-14 PF00702.16.fs 2/2 667 808 .. 66 183 .] 50.8 3.4e-14 PF00689.11.ls 1/1 904 1055 .. 1 197 [] 121.9 1.7e-33 PF00689.11.fs 1/1 904 1055 .. 1 197 [] 120.1 6.9e-34 Alignments of top-scoring domains: PF00690.16.fs: domain 1 of 1, from 53 to 136: score 73.0, E = 2.8e-20 *->eelkkevdldahkltvEevleklktdpeeGL..sseeaaeRlkkyGp e+ k + + + + E ++++lkt+p eGL++++ + ++R +++G fg06458 53 EAVVK---IKETYGDTEAICRRLKTSPVEGLpgTAPDLEKRKQIFGQ 96 NeLppekktslwlkfLeQFkdplvllLlaAAiiSALdfvlgg<-* N +pp+k+++++++++e+++d+++++L++AAiiS + ++++ fg06458 97 NFIPPKKPKTFLQLVWEALQDVTLIILEIAAIIS--LGLSFY 136 PF00690.16.ls: domain 1 of 1, from 53 to 136: score 74.9, E = 2.3e-19 *->eelkkevdldahkltvEevleklktdpeeGL..sseeaaeRlkkyGp e+ k + + + + E ++++lkt+p eGL++++ + ++R +++G fg06458 53 EAVVK---IKETYGDTEAICRRLKTSPVEGLpgTAPDLEKRKQIFGQ 96 NeLppekktslwlkfLeQFkdplvllLlaAAiiSALdfvlgg<-* N +pp+k+++++++++e+++d+++++L++AAiiS + ++++ fg06458 97 NFIPPKKPKTFLQLVWEALQDVTLIILEIAAIIS--LGLSFY 136 PF00122.10.ls: domain 1 of 1, from 168 to 456: score 134.6, E = 2.4e-37 *->villivllnatlefyqesrAekAleaLkklvp..ptAtVlRdGgkee +ill v+ + ++ ++ ek+ + L + ++++ tV+R G + + fg06458 168 AILLSVICVVLVTAFNDWSKEKQFRGLQSRIEqeQKFTVVRAG-QVV 213 eipaeeLvpGDiVevkpGdrVPADgrvvegestLkVDESaLTGESlPVeK +ip++e+v+GDi +vk Gd PADg ++g++ Lk+DES+LTGES V K fg06458 214 QIPVAEIVVGDIAQVKYGDLLPADGLFIQGND-LKIDESSLTGESDQVRK 262 hsdvvtpdnplergnmVfaGTlvvsGsltgvVtatGddTflgkIakLVee +++ m+ +GT v +Gs+++ Vta+G +++ g I +L fg06458 263 SV---------DKDPMLLSGTHVMEGSGRMLVTAVGVNSQTGIIFTLLGA 303 Aqsskt..........................................Pl ++ +++++ +++++ + ++ ++ ++++ +++++ + ++++++ l fg06458 304 GGEEEEkkdkkakqqdgaaamemqplksaeggdaddrkkasmhkkeksVL 353 Qrlldkfgkiltpvililavlvfiiwllrnfnaafggswleg........ Q +l+k++ ++ ++ l++++++ ii +l ++ ++ ++++ + fg06458 354 QGKLTKLAVQIGKAGLVMSAITVIILVL------YFTVDTFVvnkkpwlp 397 .........llyalifavallVaAcPegLplvvtvalalGtgrmAkkgaL + ++ + ++ +i++v++lV+A+PegLpl+vt +la ++++m k + L fg06458 398 ectpvyvqyFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNL 447 VKglpAvEt<-* V++l+A Et fg06458 448 VRHLDACET 456 PF00122.10.fs: domain 1 of 2, from 205 to 293: score 91.7, E = 1.3e-27 *->tVlRdGgkeeeipaeeLvpGDiVevkpGdrVPADgrvvegestLkVD tV+R G + ++ip++e+v+GDi +vk Gd PADg ++g++ Lk+D fg06458 205 TVVRAG-QVVQIPVAEIVVGDIAQVKYGDLLPADGLFIQGND-LKID 249 ESaLTGESlPVeKhsdvvtpdnplergnmVfaGTlvvsGsltgvVtatGd ES+LTGES V K +++ m+ +GT v +Gs+++ Vta+G fg06458 250 ESSLTGESDQVRKSV---------DKDPMLLSGTHVMEGSGRMLVTAVGV 290 dTf<-* +++ fg06458 291 NSQ 293 PF00122.10.fs: domain 2 of 2, from 348 to 456: score 65.0, E = 1.6e-19 *->ssktPlQrlldkfgkiltpvililavlvfiiwllrnfnaafggswle ++k+ lQ +l+k++ ++ ++ l++++++ ii +l ++ + fg06458 348 KEKSVLQGKLTKLAVQIGKAGLVMSAITVIILVL------YFTVDTF 388 g.................llyalifavallVaAcPegLplvvtvalalGt + ++++ ++ ++ + ++ +i++v++lV+A+PegLpl+vt +la ++ fg06458 389 VvnkkpwlpectpvyvqyFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSV 438 grmAkkgaLVKglpAvEt<-* ++m k + LV++l+A Et fg06458 439 KKMMKDNNLVRHLDACET 456 PF00702.16.ls: domain 1 of 1, from 460 to 808: score 59.2, E = 1.3e-14 *->ikavvFDkDGTLtdgkeppiaeaiveaaaelgl.lpleevekllgrg a++ Dk+GTLt+ + +++a+v + ++ p + k ++ fg06458 460 ATAICSDKTGTLTTN-RMTVVQAYVGDVHYKEIpDPSSINTKTMELL 505 l.g..erilleggltaell............................... +++ ++ + + ++ ++ ++ ++ +++++ + + + + + ++ + fg06458 506 InAiaINSAYTTKILPPEKegalprqvgnktecgllgfvldlkqdyepvr 555 .................................................. + ++++ + + ++ +++ ++ + ++++ + +++ ++ ++ + fg06458 556 sqmpeeklykvytfnsvrksmstviklpdesfrmyskgaseivlkkccki 605 .................................................. ++ ++++ +++++++ ++ ++ ++ ++ ++ +++++++ + fg06458 606 lngageprvfrprdrdemvkkviepmacdglrticvayrdfpsspepdwd 655 ........d.evlglialdklypgarealkaLkrrGikvailTggdr.na ++++ ++ +++ ++++d+++p+++ea+++++r+Gi v ++Tg++ ++a fg06458 656 nendilneLtCICVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNInTA 705 eallealgla.lfdviidsdevggvgpivvgKPkpeifllalerlgvkpe +a +a +++i +++ + +++ f + ++ +++ e fg06458 706 RA------IAiKCGIIHPGEDFL--------CLEGKEFNRRIRNEKGEIE 741 evg....................................pe.vlmVGDgv ++ ++ ++ + +++++++++ ++ +++++++ + v++ GDg fg06458 742 --QeridkiwpklrvlarssptdkhtlvkgiidsthteqRQvVAVTGDGT 789 nDapalaaAGvgvamgngg<-* nD pal++A+vg amg +g fg06458 790 NDGPALKKADVGFAMGIAG 808 PF00702.16.fs: domain 2 of 2, from 667 to 808: score 50.8, E = 3.4e-14 *->lglial.dklypgarealkaLkrrGikvailTggdr.naeallealg ++++ +d+++p+++ea+++++r+Gi v ++Tg++ ++a+a fg06458 667 ICVVGIeDPVRPEVPEAIRKCQRAGITVRMVTGDNInTARA------ 707 la.lfdviidsdevggvgpivvgKPkpeifllalerlgvkpeevg..... +a +++i +++ + +++ f + ++ +++ e ++ ++ fg06458 708 IAiKCGIIHPGEDFL--------CLEGKEFNRRIRNEKGEIE--Qeridk 747 ...............................pe.vlmVGDgvnDapalaa ++ + +++++++++ ++ +++++++ + v++ GDg nD pal++ fg06458 748 iwpklrvlarssptdkhtlvkgiidsthteqRQvVAVTGDGTNDGPALKK 797 AGvgvamgngg<-* A+vg amg +g fg06458 798 ADVGFAMGIAG 808 PF00689.11.ls: domain 1 of 1, from 904 to 1055: score 121.9, E = 1.7e-33 *->RpPRnpkDeliitgllffrylviGvivavatlaaFvwwfygggenGi R+P+ + +++l++++++++++++av++la+ ++ +++g fg06458 904 RKPYGR-----NKPLISRTMMKNILGHAVYQLALIFTLLFVG----- 940 dfgPgllygqlthwescsandledsfkgqewCeifrkglefratTmaFtv ++++++ g +++ +s+ ++ ++T+ F++ fg06458 941 EKMFQIDSGRNAPLHSP----------------------PSEHYTIIFNT 968 lVviqmfNAWEalncrsefFmhPldrnSlfqmgp.lwrNkwLllAvvlsl +V++q+fN ++n+r ++ + +++ +++rN++++ +v +++ fg06458 969 FVMMQLFN---EINARK------IHGE--RNVFDgIFRNPIFCTIVLGTF 1007 alqllivYvPglqtiFqthpllslqeWlvvlpfsflvfildEirKfikRr a+q++iv ++g ++++++++l +W++++ +++ ++++ ++ i+ + fg06458 1008 AIQIVIVQFGGKPFSCSPLQL---DQWMWCIFIGLGELVWGQVIATIPTS 1054 r<-* r fg06458 1055 R 1055 PF00689.11.fs: domain 1 of 1, from 904 to 1055: score 120.1, E = 6.9e-34 *->RpPRnpkDeliitgllffrylviGvivavatlaaFvwwfygggenGi R+P+ + +++l++++++++++++av++la+ ++ +++g fg06458 904 RKPYGR-----NKPLISRTMMKNILGHAVYQLALIFTLLFVG----- 940 dfgPgllygqlthwescsandledsfkgqewCeifrkglefratTmaFtv ++++++ g +++ +s+ ++ ++T+ F++ fg06458 941 EKMFQIDSGRNAPLHSP----------------------PSEHYTIIFNT 968 lVviqmfNAWEalncrsefFmhPldrnSlfqmgp.lwrNkwLllAvvlsl +V++q+fN ++n+r ++ + +++ +++rN++++ +v +++ fg06458 969 FVMMQLFN---EINARK------IHGE--RNVFDgIFRNPIFCTIVLGTF 1007 alqllivYvPglqtiFqthpllslqeWlvvlpfsflvfildEirKfikRr a+q++iv ++g ++++++++l +W++++ +++ ++++ ++ i+ + fg06458 1008 AIQIVIVQFGGKPFSCSPLQL---DQWMWCIFIGLGELVWGQVIATIPTS 1054 r<-* r fg06458 1055 R 1055 //