hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-09472207/chunk_1/iprscan-20080809-09472207.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: fg06458
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
TIGR01517     ATPase-IIB_Ca: calcium-translocating P-  1759.7          0   1
TIGR01494     ATPase_P-type: ATPase, P-type (transpor   407.4   6.9e-120   7

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
TIGR01517       1/1      24  1054 ..     1   885 []  1759.7        0
TIGR01494       1/7     168   290 ..     1   117 [.    82.4  4.6e-22
TIGR01494       2/7     400   484 ..   154   235 ..    96.8  2.2e-26
TIGR01494       5/7     665   715 ..   316   366 ..    72.0  3.9e-19
TIGR01494       6/7     752   867 ..   363   467 ..   124.7  8.6e-35

Alignments of top-scoring domains:
TIGR01517: domain 1 of 1, from 24 to 1054: score 1759.7, E = 0
                   *->eesvreetsiedavidefdvsvsielkLtd.ilkvyeklGgaeGiat
                      ++   e ++ + ++ +  +++ ++el+ t  ++k+ e +G+ e i+ 
     fg06458    24    KNQRNESSHGGEFGCTMEELRSLMELRGTEaVVKIKETYGDTEAICR 70   

                   KLktdlneGvrss..tlerRekvYGkNeLPekppkSFLqlVweAlsDktL
                    Lkt++ eG++   ++le R  ++G N++P+k+pk+FLqlVweAl+D+tL
     fg06458    71 RLKTSPVEGLPGTapDLEKRKQIFGQNFIPPKKPKTFLQLVWEALQDVTL 120  

                   iLLsvAAvVSlVv...................geekeeketGWIEGvAIL
                   i+L++AA+ Sl+ +  +++++++++  + +++ e+++e e GWIEG+AIL
     fg06458   121 IILEIAAIISLGLsfyhppgegnegcataqggAEDEGEAEAGWIEGAAIL 170  

                   vSVilVVlVtAvNDYkkelqFReLnsrkkeeqkikVIRgGqeiqIsihdv
                   +SVi+VVlVtA+ND++ke+qFR+L+sr+++eqk++V+R Gq+ qI+++++
     fg06458   171 LSVICVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVVRAGQVVQIPVAEI 220  

                   vVGDivsLstGDvVPADGvfIsGlklkiDESSiTGESdpikKgkvk...L
                   vVGDi+++++GD++PADG fI+G++lkiDESS+TGESd ++K+ +k++ L
     fg06458   221 VVGDIAQVKYGDLLPADGLFIQGNDLKIDESSLTGESDQVRKSVDKdpmL 270  

                   LSGTkVleGsGrMLvTAVGvnSftGklmteLreageee............
                   LSGT+V+eGsGrMLvTAVGvnS+tG+++t+L+++geee++++++ +++++
     fg06458   271 LSGTHVMEGSGRMLVTAVGVNSQTGIIFTLLGAGGEEEekkdkkakqqdg 320  

                   ...............................PLQlkLseLAslIgkfGlg
                       + ++ ++ ++++ +++++ + +++++++LQ+kL++LA++Igk+Gl+
     fg06458   321 aaamemqplksaeggdaddrkkasmhkkeksVLQGKLTKLAVQIGKAGLV 370  

                   sAvLlflvLvlryvieiived........teedaqtfldlFiiaVTivVV
                   ++++++++Lvl++ ++++v+ +++  ++ t+ + q+f+++Fii+VT++VV
     fg06458   371 MSAITVIILVLYFTVDTFVVNkkpwlpecTPVYVQYFVKFFIIGVTVLVV 420  

                   AVPEGLPLAVTlALAYsmkkMmkDnNLVRhLaACETMGsATaICSDKTGT
                   AVPEGLPLAVT++LAYs+kkMmkDnNLVRhL+ACETMG+ATaICSDKTGT
     fg06458   421 AVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGT 470  

                   LTqNvMsVVqgyIgeeavrni.............LvegivlNs.....ss
                   LT+N+M+VVq+y g  + + i+++++ ++++ + L+++i++Ns  +++++
     fg06458   471 LTTNRMTVVQAYVGDVHYKEIpdpssintktmelLINAIAINSayttkIL 520  

                   eevkdggkeefiGsKTEcALLdfgllllrdvqevr...keekvGvkiyPF
                   +++k+g +++ +G+KTEc LL+f+l+l++d+  vr++ +eek+ +k+y+F
     fg06458   521 PPEKEGALPRQVGNKTECGLLGFVLDLKQDYEPVRsqmPEEKL-YKVYTF 569  

                   nSeRKkMSvvvkh.sgGyRlFiKGAsEIvlkkCekvldsnGeakpi..sd
                   nS+RK+MS+v+k +++  R+ +KGAsEIvlkkC k+l+ +Ge ++++++d
     fg06458   570 NSVRKSMSTVIKLpDESFRMYSKGASEIVLKKCCKILNGAGEPRVFrpRD 619  

                   kkdevedvIeplASdALRticLayrD....elprkdspN...kgltliav
                   ++  v+ vIep+A d+LRtic+ayrD +++++p++d++N+  + lt+i+v
     fg06458   620 RDEMVKKVIEPMACDGLRTICVAYRDfpssPEPDWDNENdilNELTCICV 669  

                   vGIkDPvRpGVreavqeCQrAGiTVRMVTGDNisTAkAIArnCgILtegg
                   vGI+DPvRp+V+ea+ +CQrAGiTVRMVTGDNi+TA+AIA +CgI ++g+
     fg06458   670 VGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAIKCGIIHPGE 719  

                   ..lamEGkeFRk..............dkILPkLrVLARSsPlDKqLLVe.
                   + l++EGkeF+++ ++++++ ++++ dkI+PkLrVLARSsP+DK++LV++
     fg06458   720 dfLCLEGKEFNRrirnekgeieqeriDKIWPKLRVLARSSPTDKHTLVKg 769  

                   .....LkdmGeVVAVTGDGTNDAPALklAdVGFaMGIaGTeVAkeaSDIi
                     +++   +++VVAVTGDGTND+PALk+AdVGFaMGIaGT+VAkeaSDIi
     fg06458   770 iidstHTEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDII 819  

                   LlDDNFaSIVrAVkWGRnVydsIkKFlQFQLTVNVvAVivtFvGsciSst
                   L+DDNF+SIV+AV+WGRnVydsI+KFlQFQLTVNVvAViv+F+G+ci+++
     fg06458   820 LTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQD 869  

                   SPLtAVQLLWVNLIMDTLAALALATEpPtEelLdRkPiGRnapLISRsMW
                   SPL+AVQ+LWVNLIMDT A+LALATEpPtE lL+RkP+GRn+pLISR+M+
     fg06458   870 SPLKAVQMLWVNLIMDTFASLALATEPPTETLLLRKPYGRNKPLISRTMM 919  

                   knILgqAiYQLvvlfillFaGeeiF..................TiVFNtF
                   knILg+A YQL+ +f+llF Ge++F+ +++++ + +++++++ Ti+FNtF
     fg06458   920 KNILGHAVYQLALIFTLLFVGEKMFqidsgrnaplhsppsehyTIIFNTF 969  

                   VllQlFneiNARkLe.elNvFeglFkRnaiFvaImlftfgvQViiVeFGG
                   V +QlFneiNARk+++e+NvF g+F+ n+iF++I+l+tf++Q+ iV+FGG
     fg06458   970 VMMQLFNEINARKIHgERNVFDGIFR-NPIFCTIVLGTFAIQIVIVQFGG 1018 

                   sffStvsLsieqWilcvllGmlSLilGvllrliPve<-*
                   ++fS+++L   qW +c+++G + L++G+++ +iP++   
     fg06458  1019 KPFSCSPLQLDQWMWCIFIGLGELVWGQVIATIPTS    1054 

TIGR01494: domain 1 of 7, from 168 to 290: score 82.4, E = 4.6e-22
                   *->viliivllfvlletlqkeaaedalrslkdkelnpqkvtvlrng.gve
                      +il+ v+ +vl+ +++++++e+++r l++++ + qk+tv+r g++v+
     fg06458   168    AILLSVICVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVVRAGqVVQ 214  

                   isskdlvvGDiVlvkkGdivPADgvLLsg.scyVdessLTGEsn....pv
                   i++ ++vvGDi +vk Gd +PADg++++g+++++dessLTGEs++ ++ v
     fg06458   215 IPVAEIVVGDIAQVKYGDLLPADGLFIQGnDLKIDESSLTGESDqvrkSV 264  

                   lKtdapfagtynfnGtltlkvskiav<-*
                   +K  +  +gt++ +G++++ v++ +v   
     fg06458   265 DKDPMLLSGTHVMEGSGRMLVTAVGV    290  

TIGR01494: domain 2 of 7, from 400 to 484: score 96.8, E = 2.2e-26
                   *->tliglwtffkiflralillviaiPiaLpvavtialavgdkrma...i
                      t+ ++ +f+k f++ +++lv+a+P++Lp+avti la++ k+m+++++
     fg06458   400    TPVYVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMkdnN 446  

                   lvrslnalEelGqvdyicsDKTGTLTenkmtfkkvyig<-*
                   lvr+l+a+E++G +++icsDKTGTLT+n mt+++ y+g   
     fg06458   447 LVRHLDACETMGNATAICSDKTGTLTTNRMTVVQAYVG    484  

TIGR01494: domain 5 of 7, from 665 to 715: score 72.0, E = 3.9e-19
                   *->ellGltaieDpLredvketIeeLkraGikvwMlTGDnveTAiaIAke
                      +++++++ieDp+r++v+e+I +++raGi+v+M+TGDn++TA+aIA  
     fg06458   665    TCICVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAIK 711  

                   cglf<-*
                   cg++   
     fg06458   712 CGII    715  

TIGR01494: domain 6 of 7, from 752 to 867: score 124.7, E = 8.6e-35
                   *->cglfARvsPeqKaeiVellqkrga.....iVamiGDGaNDapALkaA
                      ++++AR+sP++K ++V+ + ++ +++++++Va++GDG+ND pALk+A
     fg06458   752    LRVLARSSPTDKHTLVKGIIDSTHteqrqVVAVTGDGTNDGPALKKA 798  

                   DVGiaig......AkaaaDivltddnlslivlllvhGRwtykrikklily
                   DVG+a+g  +++ Ak+a+Di+ltddn+s+iv+++ +GR++y+ i+k++++
     fg06458   799 DVGFAMGiagtdvAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQF 848  

                   alyynliliillfvlsvin<-*
                   +l++n++++i++f +++i+   
     fg06458   849 QLTVNVVAVIVAFTGACIT    867  

//