hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-09541200/chunk_1/iprscan-20080809-09541200.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: fg06748
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00353                                                  70.3    2.5e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00353    1/1     108   159 ..     1    61 []    70.3  2.5e-16

Alignments of top-scoring domains:
SM00353: domain 1 of 1, from 108 to 159: score 70.3, E = 2.5e-16
                   *->narERrlrRRekiNeqafdeLrslvPtlpkgggnskKlsKasiLrlA
                      n  ER  rR++ iN  +f+ L++l+P+       ++KlsKa+iL+ +
     fg06748   108    NSNER--RRMQSINA-GFQSLKTLIPHTD-----GEKLSKAAILQQT 146  

                   ieYIrksLqeqlqe<-*
                   +eYI  sL+++      
     fg06748   147 AEYI-FSLEQEKTR    159  

//