hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090630/iprscan-20090630-16192294/chunk_1/iprscan-20090630-16192294.nocrc
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Query sequence: fh00176s2
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00069.15.ls Protein kinase domain                       255.2    1.3e-73   1
PF00069.15.fs Protein kinase domain                       253.7    3.6e-73   1
PF07714.7.fs Protein tyrosine kinase                      31.6    4.3e-09   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF07714.7.fs   1/1      20   173 ..     1   156 [.    31.6  4.3e-09
PF00069.15.ls   1/1      20   335 ..     1   287 []   255.2  1.3e-73
PF00069.15.fs   1/1      26   335 ..     6   287 .]   253.7  3.6e-73

Alignments of top-scoring domains:
PF07714.7.fs: domain 1 of 1, from 20 to 173: score 31.6, E = 4.3e-09
                   *->lklg.kkLGeGaFGeVykGtlkgsgdgteikVAVKtLkeigaseeei
                      ++  + k G+G +G+Vyk++ k  ++++e + A K + e g+  +  
   fh00176s2    20    FEYEgCKVGRGTYGHVYKARRK--DGKDEKEYALKQI-E-GTGIS-- 60   

                   eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd
                      +  rE++++++l +HpN++ L  v + +++     +++ + y+e+ d
   fh00176s2    61 --MSACREIALLREL-KHPNVIALQKVFLSHSDRK---VWLLFDYAEH-D 103  

                   LldfLrkhr......egrpLtlkdLlsfalQiAkGMeYLesknfvHRDLA
                   L +  + hr ++ ++ + +L+ ++  s  +Qi +G  YL+++   HRDL 
   fh00176s2   104 LWHIIKFHRaskankKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLK 153  

                   ARNcLVs....enlvVKIsD<-*
                     N+LV ++++e + VKI+D   
   fh00176s2   154 PANILVMgegpERGRVKIAD    173  

PF00069.15.ls: domain 1 of 1, from 20 to 335: score 255.2, E = 1.3e-73
                   *->yelle.klGsGsfGtVykakhkgtgk..iVAvKiikkrkekskkdkt
                      +e ++ k+G+G++G Vyka++k+  +++++A+K+i+  +++++ ++ 
   fh00176s2    20    FEYEGcKVGRGTYGHVYKARRKDGKDekEYALKQIEGTGISMSACR- 65   

                   arrlsEiqilkrLsHpNIvrlidvfed..kdhlylVlEycegGLrvldLf
                        Ei++l++L+HpN++ l  vf ++++++++l ++y+e+     dL+
   fh00176s2    66 -----EIALLRELKHPNVIALQKVFLShsDRKVWLLFDYAEH-----DLW 105  

                   dyls..e..trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPe
                   ++++ ++ +  +k+p+ ++   +k+ ++Qil g+ YLH+n+++HRDLKP+
   fh00176s2   106 HIIKfhRasKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPA 155  

                   NILldnngvvdaflKiaDFGlAkkls..t.sss.lttfvGTpwYmAPEvl
                   NIL+  +g    ++KiaD G+A+++++++++  +l+ +v+T wY+APE+l
   fh00176s2   156 NILVMGEGPERGRVKIADMGFARLFNspLkPLAdLDPVVVTFWYRAPELL 205  

                   lggngygtkvDvWSlGvilyelltGk.............pPFsgevqdsl
                   lg+++y++++D+W++G+i++ellt ++  + ++++ +++ PF ++     
   fh00176s2   206 LGARHYTKAIDIWAIGCIFAELLTSEpifhcrqediktsNPFHHD----- 250  

                   dqlqlirkilgpplefdspewdsisrse.fr.................r.
                    ql +i+ ++g p + d++  + ++ +++++++ ++++  +++  +  ++
   fh00176s2   251 -QLDRIFSVMGFPADKDWEDIRKMPEYPtLQkdfrrttyansslikymEk 299  

                   l.pnlseeakdLikkcLnkDPskRltaeeilqHPwf<-*
                    +++ ++    L+ k+L++DP+kR+t e++lq+P+f   
   fh00176s2   300 HkVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF    335  

PF00069.15.fs: domain 1 of 1, from 26 to 335: score 253.7, E = 3.6e-73
                   *->klGsGsfGtVykakhkgtgk..iVAvKiikkrkekskkdktarrlsE
                      k+G+G++G Vyka++k+  +++++A+K+i+  +++++ ++      E
   fh00176s2    26    KVGRGTYGHVYKARRKDGKDekEYALKQIEGTGISMSACR------E 66   

                   iqilkrLsHpNIvrlidvfed..kdhlylVlEycegGLrvldLfdyls..
                   i++l++L+HpN++ l  vf ++++++++l ++y+e+     dL+++++ +
   fh00176s2    67 IALLRELKHPNVIALQKVFLShsDRKVWLLFDYAEH-----DLWHIIKfh 111  

                   e..trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldn
                   + +  +k+p+ ++   +k+ ++Qil g+ YLH+n+++HRDLKP+NIL+  
   fh00176s2   112 RasKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMG 161  

                   ngvvdaflKiaDFGlAkkls..t.sss.lttfvGTpwYmAPEvllggngy
                   +g    ++KiaD G+A+++++++++  +l+ +v+T wY+APE+llg+++y
   fh00176s2   162 EGPERGRVKIADMGFARLFNspLkPLAdLDPVVVTFWYRAPELLLGARHY 211  

                   gtkvDvWSlGvilyelltGk.............pPFsgevqdsldqlqli
                   ++++D+W++G+i++ellt ++  + ++++ +++ PF ++      ql +i
   fh00176s2   212 TKAIDIWAIGCIFAELLTSEpifhcrqediktsNPFHHD------QLDRI 255  

                   rkilgpplefdspewdsisrse.fr.................r.l.pnls
                   + ++g p + d++  + ++ +++++++ ++++  +++  +  ++ +++ +
   fh00176s2   256 FSVMGFPADKDWEDIRKMPEYPtLQkdfrrttyansslikymEkHkVKPD 305  

                   eeakdLikkcLnkDPskRltaeeilqHPwf<-*
                   +    L+ k+L++DP+kR+t e++lq+P+f   
   fh00176s2   306 SKVFLLLQKLLTMDPTKRITSEQALQDPYF    335  

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