# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofh02524.fasta.nr -Q fh02524.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fh02524, 345 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6806135 sequences Expectation_n fit: rho(ln(x))= 6.6238+/-0.000211; mu= 4.6843+/- 0.012 mean_var=150.8960+/-30.168, 0's: 33 Z-trim: 68 B-trim: 1064 in 3/64 Lambda= 0.104408 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62088202|dbj|BAD92548.1| nebulette non-muscle i ( 345) 2431 377.3 2.1e-102 gi|46937163|emb|CAE45323.1| LIM-nebulette [Homo sa ( 270) 1868 292.4 6e-77 gi|73948761|ref|XP_859080.1| PREDICTED: similar to ( 270) 1860 291.2 1.4e-76 gi|149021153|gb|EDL78760.1| rCG55853, isoform CRA_ ( 270) 1838 287.9 1.4e-75 gi|12835961|dbj|BAB23436.1| unnamed protein produc ( 270) 1817 284.7 1.2e-74 gi|38524491|dbj|BAD02396.1| LIM and SH3 protein [G ( 273) 1799 282.0 8.1e-74 gi|54038462|gb|AAH84378.1| LOC495167 protein [Xeno ( 275) 1629 256.4 4.1e-66 gi|21756059|dbj|BAC04812.1| unnamed protein produc ( 234) 1565 246.7 3e-63 gi|169158737|emb|CAQ14524.1| novel protein similar ( 276) 1361 216.1 5.9e-54 gi|60649653|gb|AAH90509.1| Zgc:113144 [Danio rerio ( 276) 1357 215.5 9e-54 gi|119606578|gb|EAW86172.1| hCG21545, isoform CRA_ ( 933) 1169 187.7 7e-45 gi|126308238|ref|XP_001371465.1| PREDICTED: simila ( 266) 1142 183.1 4.9e-44 gi|114667747|ref|XP_511445.2| PREDICTED: similar t ( 391) 1143 183.4 5.8e-44 gi|3024089|sp|Q61792|LASP1_MOUSE LIM and SH3 domai ( 263) 1133 181.7 1.2e-43 gi|73966152|ref|XP_864168.1| PREDICTED: similar to ( 262) 1127 180.8 2.3e-43 gi|75052894|sp|O77506|LASP1_RABIT LIM and SH3 doma ( 263) 1127 180.8 2.3e-43 gi|57012886|sp|Q99MZ8|LASP1_RAT LIM and SH3 domain ( 263) 1126 180.6 2.6e-43 gi|75061664|sp|Q5R5W0.1|LASP1_PONAB LIM and SH3 do ( 261) 1105 177.5 2.3e-42 gi|109114799|ref|XP_001085111.1| PREDICTED: LIM an ( 261) 1105 177.5 2.3e-42 gi|3122342|sp|Q14847|LASP1_HUMAN LIM and SH3 domai ( 261) 1103 177.2 2.8e-42 gi|1584035|prf||2122252A Lasp-1 protein ( 261) 1095 176.0 6.5e-42 gi|158260717|dbj|BAF82536.1| unnamed protein produ ( 261) 1094 175.8 7.3e-42 gi|15214662|gb|AAH12460.1| LASP1 protein [Homo sap ( 261) 1088 174.9 1.4e-41 gi|194217031|ref|XP_001498320.2| PREDICTED: simila ( 253) 1023 165.1 1.2e-38 gi|119606577|gb|EAW86171.1| hCG2040312 [Homo sapie ( 140) 986 159.3 3.7e-37 gi|73966158|ref|XP_864244.1| PREDICTED: similar to ( 256) 860 140.6 2.9e-31 gi|27881741|gb|AAH44681.1| Lasp1 protein [Xenopus ( 256) 834 136.6 4.4e-30 gi|51513486|gb|AAH80453.1| Lasp1 protein [Xenopus ( 258) 831 136.2 6.1e-30 gi|14043145|gb|AAH07560.1| LASP1 protein [Homo sap ( 323) 818 134.3 2.8e-29 gi|119580947|gb|EAW60543.1| LIM and SH3 protein 1, ( 323) 818 134.3 2.8e-29 gi|46362458|gb|AAH66574.1| Zgc:77542 [Danio rerio] ( 234) 814 133.6 3.3e-29 gi|73966156|ref|XP_864215.1| PREDICTED: similar to ( 242) 809 132.9 5.8e-29 gi|73966160|ref|XP_851714.1| PREDICTED: similar to ( 257) 808 132.7 6.7e-29 gi|88909184|sp|Q3B7M5|LASP1_BOVIN LIM and SH3 doma ( 260) 804 132.1 1e-28 gi|119606580|gb|EAW86174.1| hCG21545, isoform CRA_ ( 103) 711 117.7 8.9e-25 gi|1407651|gb|AAC52639.1| Lasp-1 ( 205) 709 117.7 1.8e-24 gi|149412208|ref|XP_001509864.1| PREDICTED: simila ( 164) 674 112.4 5.8e-23 gi|32766600|gb|AAH54945.1| Zgc:77542 protein [Dani ( 240) 671 112.1 1e-22 gi|6692822|gb|AAF24858.1|AF047368_1 nebulette [Hom (1011) 654 110.1 1.7e-21 gi|13124346|sp|O76041|NEBL_HUMAN Nebulette (Actin- (1014) 654 110.1 1.7e-21 gi|114629670|ref|XP_001154532.1| PREDICTED: nebule (1014) 654 110.1 1.7e-21 gi|167887627|gb|ACA06025.1| nebulette variant 4 [H (1016) 654 110.1 1.7e-21 gi|109088375|ref|XP_001095037.1| PREDICTED: nebule (1014) 649 109.4 2.8e-21 gi|73948763|ref|XP_535159.2| PREDICTED: similar to (1012) 646 108.9 3.8e-21 gi|73948759|ref|XP_849547.1| PREDICTED: similar to (1013) 646 108.9 3.8e-21 gi|123242698|emb|CAM22782.1| LIM and SH3 protein 1 ( 186) 629 105.6 7e-21 gi|149743529|ref|XP_001496414.1| PREDICTED: simila (1013) 638 107.7 8.8e-21 gi|109505234|ref|XP_225644.4| PREDICTED: similar t (1014) 637 107.6 9.8e-21 gi|149605077|ref|XP_001516545.1| PREDICTED: simila ( 118) 620 104.1 1.3e-20 gi|68534135|gb|AAH99578.1| Nebl protein [Mus muscu ( 102) 619 103.9 1.3e-20 >>gi|62088202|dbj|BAD92548.1| nebulette non-muscle isofo (345 aa) initn: 2431 init1: 2431 opt: 2431 Z-score: 1993.7 bits: 377.3 E(): 2.1e-102 Smith-Waterman score: 2431; 100.000% identity (100.000% similar) in 345 aa overlap (1-345:1-345) 10 20 30 40 50 60 fh0252 RDPAPASPRARPAPGARPRRPPRALTRGPAPTPYPAPAARSPPACQEAVRGSPGDVTAAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RDPAPASPRARPAPGARPRRPPRALTRGPAPTPYPAPAARSPPACQEAVRGSPGDVTAAP 10 20 30 40 50 60 70 80 90 100 110 120 fh0252 GSQQPPPPPPPGTAIMNPQCARCGKVVYPTEKVNCLDKYWHKGCFHCEVCKMALNMNNYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GSQQPPPPPPPGTAIMNPQCARCGKVVYPTEKVNCLDKYWHKGCFHCEVCKMALNMNNYK 70 80 90 100 110 120 130 140 150 160 170 180 fh0252 GYEKKPYCNAHYPKQSFTTVADTPENLRLKQQSELQSQVKYKRDFEESKGRGFSIVTDTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GYEKKPYCNAHYPKQSFTTVADTPENLRLKQQSELQSQVKYKRDFEESKGRGFSIVTDTP 130 140 150 160 170 180 190 200 210 220 230 240 fh0252 ELQRLKRTQEQISNVKYHEDFEKTKGRGFTPVVDDPVIERVRKNTQVVSDAAYKGVHPHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ELQRLKRTQEQISNVKYHEDFEKTKGRGFTPVVDDPVIERVRKNTQVVSDAAYKGVHPHI 190 200 210 220 230 240 250 260 270 280 290 300 fh0252 VEMDRRPGIIVAPVLPGAYQQSHSQGYGYMHQTSVSSMRSMQHSPNLRTYRAMYDYSAQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VEMDRRPGIIVAPVLPGAYQQSHSQGYGYMHQTSVSSMRSMQHSPNLRTYRAMYDYSAQD 250 260 270 280 290 300 310 320 330 340 fh0252 EDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFVN ::::::::::::::::::::::::::::::::::::::::::::: gi|620 EDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFVN 310 320 330 340 >>gi|46937163|emb|CAE45323.1| LIM-nebulette [Homo sapien (270 aa) initn: 1868 init1: 1868 opt: 1868 Z-score: 1536.7 bits: 292.4 E(): 6e-77 Smith-Waterman score: 1868; 99.630% identity (99.630% similar) in 270 aa overlap (76-345:1-270) 50 60 70 80 90 100 fh0252 QEAVRGSPGDVTAAPGSQQPPPPPPPGTAIMNPQCARCGKVVYPTEKVNCLDKYWHKGCF :::::::::::::::::::::::::::::: gi|469 MNPQCARCGKVVYPTEKVNCLDKYWHKGCF 10 20 30 110 120 130 140 150 160 fh0252 HCEVCKMALNMNNYKGYEKKPYCNAHYPKQSFTTVADTPENLRLKQQSELQSQVKYKRDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|469 HCEVCKMALNMNNYKGYEKKPYCNAHYPKQSFTTVADTPENLRLKQQSELQSQVKYKRDF 40 50 60 70 80 90 170 180 190 200 210 220 fh0252 EESKGRGFSIVTDTPELQRLKRTQEQISNVKYHEDFEKTKGRGFTPVVDDPVIERVRKNT :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: gi|469 EESKGRGFSIVTDTPELQRLKRTQEQISNVKYHEDFEKTKGRGFTPVVDDPVTERVRKNT 100 110 120 130 140 150 230 240 250 260 270 280 fh0252 QVVSDAAYKGVHPHIVEMDRRPGIIVAPVLPGAYQQSHSQGYGYMHQTSVSSMRSMQHSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|469 QVVSDAAYKGVHPHIVEMDRRPGIIVAPVLPGAYQQSHSQGYGYMHQTSVSSMRSMQHSP 160 170 180 190 200 210 290 300 310 320 330 340 fh0252 NLRTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|469 NLRTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFVN 220 230 240 250 260 270 >>gi|73948761|ref|XP_859080.1| PREDICTED: similar to neb (270 aa) initn: 1860 init1: 1860 opt: 1860 Z-score: 1530.2 bits: 291.2 E(): 1.4e-76 Smith-Waterman score: 1860; 98.889% identity (99.630% similar) in 270 aa overlap (76-345:1-270) 50 60 70 80 90 100 fh0252 QEAVRGSPGDVTAAPGSQQPPPPPPPGTAIMNPQCARCGKVVYPTEKVNCLDKYWHKGCF :::::::::::::::::::::::::::::: gi|739 MNPQCARCGKVVYPTEKVNCLDKYWHKGCF 10 20 30 110 120 130 140 150 160 fh0252 HCEVCKMALNMNNYKGYEKKPYCNAHYPKQSFTTVADTPENLRLKQQSELQSQVKYKRDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 HCEVCKMALNMNNYKGYEKKPYCNAHYPKQSFTTVADTPENLRLKQQSELQSQVKYKRDF 40 50 60 70 80 90 170 180 190 200 210 220 fh0252 EESKGRGFSIVTDTPELQRLKRTQEQISNVKYHEDFEKTKGRGFTPVVDDPVIERVRKNT :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: gi|739 EESKGRGFSIVTDTPELQRLKRTQEQISNVKYHEDFEKTKGRGFTPVVDDPVTERVRKNT 100 110 120 130 140 150 230 240 250 260 270 280 fh0252 QVVSDAAYKGVHPHIVEMDRRPGIIVAPVLPGAYQQSHSQGYGYMHQTSVSSMRSMQHSP :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|739 QVVSDAAYKGVHPHIVEMDRRPGIIVAPVLPGAYQQSHSQGYGYMHQTSLSSMRSMQHSP 160 170 180 190 200 210 290 300 310 320 330 340 fh0252 NLRTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFVN ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|739 NLRTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGKTGMLPANYIEFVN 220 230 240 250 260 270 >>gi|149021153|gb|EDL78760.1| rCG55853, isoform CRA_b [R (270 aa) initn: 1838 init1: 1838 opt: 1838 Z-score: 1512.3 bits: 287.9 E(): 1.4e-75 Smith-Waterman score: 1838; 97.778% identity (99.259% similar) in 270 aa overlap (76-345:1-270) 50 60 70 80 90 100 fh0252 QEAVRGSPGDVTAAPGSQQPPPPPPPGTAIMNPQCARCGKVVYPTEKVNCLDKYWHKGCF :::::::::::::::::::::::::::::: gi|149 MNPQCARCGKVVYPTEKVNCLDKYWHKGCF 10 20 30 110 120 130 140 150 160 fh0252 HCEVCKMALNMNNYKGYEKKPYCNAHYPKQSFTTVADTPENLRLKQQSELQSQVKYKRDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HCEVCKMALNMNNYKGYEKKPYCNAHYPKQSFTTVADTPENLRLKQQSELQSQVKYKRDF 40 50 60 70 80 90 170 180 190 200 210 220 fh0252 EESKGRGFSIVTDTPELQRLKRTQEQISNVKYHEDFEKTKGRGFTPVVDDPVIERVRKNT :::.:::::::::::::::::::::::::::::::::::::::::::::::: ::::::: gi|149 EESRGRGFSIVTDTPELQRLKRTQEQISNVKYHEDFEKTKGRGFTPVVDDPVTERVRKNT 100 110 120 130 140 150 230 240 250 260 270 280 fh0252 QVVSDAAYKGVHPHIVEMDRRPGIIVAPVLPGAYQQSHSQGYGYMHQTSVSSMRSMQHSP :::::::::::.::.:::::::::::::::::::::::::::::::::::::.:::::: gi|149 QVVSDAAYKGVQPHVVEMDRRPGIIVAPVLPGAYQQSHSQGYGYMHQTSVSSVRSMQHSA 160 170 180 190 200 210 290 300 310 320 330 340 fh0252 NLRTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NLRTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFVN 220 230 240 250 260 270 >>gi|12835961|dbj|BAB23436.1| unnamed protein product [M (270 aa) initn: 1817 init1: 1817 opt: 1817 Z-score: 1495.2 bits: 284.7 E(): 1.2e-74 Smith-Waterman score: 1817; 97.037% identity (98.519% similar) in 270 aa overlap (76-345:1-270) 50 60 70 80 90 100 fh0252 QEAVRGSPGDVTAAPGSQQPPPPPPPGTAIMNPQCARCGKVVYPTEKVNCLDKYWHKGCF :::::::::::::::::::::::::::::: gi|128 MNPQCARCGKVVYPTEKVNCLDKYWHKGCF 10 20 30 110 120 130 140 150 160 fh0252 HCEVCKMALNMNNYKGYEKKPYCNAHYPKQSFTTVADTPENLRLKQQSELQSQVKYKRDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 HCEVCKMALNMNNYKGYEKKPYCNAHYPKQSFTTVADTPENLRLKQQSELQSQVKYKRDF 40 50 60 70 80 90 170 180 190 200 210 220 fh0252 EESKGRGFSIVTDTPELQRLKRTQEQISNVKYHEDFEKTKGRGFTPVVDDPVIERVRKNT :::::::::::::::::::::::::::::::::::::::::::::::::::: :::::.: gi|128 EESKGRGFSIVTDTPELQRLKRTQEQISNVKYHEDFEKTKGRGFTPVVDDPVTERVRKST 100 110 120 130 140 150 230 240 250 260 270 280 fh0252 QVVSDAAYKGVHPHIVEMDRRPGIIVAPVLPGAYQQSHSQGYGYMHQTSVSSMRSMQHSP :::::::::::.::.:::::::::::::::::::::::::::::::::::::::::: gi|128 QVVSDAAYKGVQPHVVEMDRRPGIIVAPVLPGAYQQSHSQGYGYMHQTSVSSMRSMQPPA 160 170 180 190 200 210 290 300 310 320 330 340 fh0252 NLRTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFVN .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 HLRTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFVN 220 230 240 250 260 270 >>gi|38524491|dbj|BAD02396.1| LIM and SH3 protein [Gallu (273 aa) initn: 1414 init1: 1414 opt: 1799 Z-score: 1480.4 bits: 282.0 E(): 8.1e-74 Smith-Waterman score: 1799; 94.872% identity (98.168% similar) in 273 aa overlap (76-345:1-273) 50 60 70 80 90 100 fh0252 QEAVRGSPGDVTAAPGSQQPPPPPPPGTAIMNPQCARCGKVVYPTEKVNCLDKYWHKGCF :::::::::::::::::::::::::::::: gi|385 MNPQCARCGKVVYPTEKVNCLDKYWHKGCF 10 20 30 110 120 130 140 150 160 fh0252 HCEVCKMALNMNNYKGYEKKPYCNAHYPKQSFTTVADTPENLRLKQQSELQSQVKYKRDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 HCEVCKMALNMNNYKGYEKKPYCNAHYPKQSFTTVADTPENLRLKQQSELQSQVKYKRDF 40 50 60 70 80 90 170 180 190 200 210 220 fh0252 EESKGRGFSIVTDTPELQRLKRTQEQISNVKYHEDFEKTKGRGFTPVVDDPVIERVRKNT :::::::::::::::::::::::::::::::::::::::::::::::::::. ::::::: gi|385 EESKGRGFSIVTDTPELQRLKRTQEQISNVKYHEDFEKTKGRGFTPVVDDPITERVRKNT 100 110 120 130 140 150 230 240 250 260 270 280 fh0252 QVVSDAAYKGVHPHIVEMDRRPGIIVAPVLPGAYQQSHSQGYGYMHQTSVSSMRSMQHSP :::::::::::::::::::::::::::::::::::::.:::::::::::.:::::.. .: gi|385 QVVSDAAYKGVHPHIVEMDRRPGIIVAPVLPGAYQQSQSQGYGYMHQTSMSSMRSVHSQP 160 170 180 190 200 210 290 300 310 320 330 340 fh0252 N---LRTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIE . ::::::::::::::::::::::::::.::::::::::::::::::.:::::::::: gi|385 HPAGLRTYRAMYDYSAQDEDEVSFRDGDYIINVQPIDDGWMYGTVQRTGKTGMLPANYIE 220 230 240 250 260 270 fh0252 FVN ::: gi|385 FVN >>gi|54038462|gb|AAH84378.1| LOC495167 protein [Xenopus (275 aa) initn: 1564 init1: 1188 opt: 1629 Z-score: 1342.0 bits: 256.4 E(): 4.1e-66 Smith-Waterman score: 1629; 82.971% identity (94.565% similar) in 276 aa overlap (76-345:1-275) 50 60 70 80 90 100 fh0252 QEAVRGSPGDVTAAPGSQQPPPPPPPGTAIMNPQCARCGKVVYPTEKVNCLDKYWHKGCF :::::::::.:::::::::::::.:::::: gi|540 MNPQCARCGRVVYPTEKVNCLDKFWHKGCF 10 20 30 110 120 130 140 150 160 fh0252 HCEVCKMALNMNNYKGYEKKPYCNAHYPKQSFTTVADTPENLRLKQQSELQSQVKYKRDF :::::::.:::::::::.:::::::::::::::::.:::::::::::::.:::::::.:: gi|540 HCEVCKMTLNMNNYKGYDKKPYCNAHYPKQSFTTVTDTPENLRLKQQSEIQSQVKYKKDF 40 50 60 70 80 90 170 180 190 200 210 220 fh0252 EESKGRGFSIVTDTPELQRLKRTQEQISNVKYHEDFEKTKGRGFTPVVDDPVIERVRKNT :::::::::::::. ::::::.:::::::.:::::::::::.:::::::::. .:::::: gi|540 EESKGRGFSIVTDALELQRLKKTQEQISNIKYHEDFEKTKGKGFTPVVDDPITDRVRKNT 100 110 120 130 140 150 230 240 250 260 270 280 fh0252 QVVSDAAYKGVHPHIVEMDRRPGIIVAPVLPGAYQQSHSQGYGYMHQTSVSSMRSMQ--H :.:::::::..:::.:::::: :..:.: .:::: : :: :::::::.:.::.:: : : gi|540 QIVSDAAYKNAHPHVVEMDRRSGMVVGPGMPGAYPQHHS-GYGYMHQSSASSVRSAQSQH 160 170 180 190 200 290 300 310 320 330 fh0252 ----SPNLRTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPAN ::..::::::::: ::::::::::.:::::::::::.:::::::::.:..:::::: gi|540 AQPLSPSMRTYRAMYDYCAQDEDEVSFREGDYIVNVQPIDEGWMYGTVQRSGKNGMLPAN 210 220 230 240 250 260 340 fh0252 YIEFVN :::.:: gi|540 YIELVN 270 >>gi|21756059|dbj|BAC04812.1| unnamed protein product [H (234 aa) initn: 1565 init1: 1565 opt: 1565 Z-score: 1290.8 bits: 246.7 E(): 3e-63 Smith-Waterman score: 1565; 99.145% identity (99.573% similar) in 234 aa overlap (112-345:1-234) 90 100 110 120 130 140 fh0252 RCGKVVYPTEKVNCLDKYWHKGCFHCEVCKMALNMNNYKGYEKKPYCNAHYPKQSFTTVA :::::::::::::::::::.:::::::::: gi|217 MALNMNNYKGYEKKPYCNARYPKQSFTTVA 10 20 30 150 160 170 180 190 200 fh0252 DTPENLRLKQQSELQSQVKYKRDFEESKGRGFSIVTDTPELQRLKRTQEQISNVKYHEDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 DTPENLRLKQQSELQSQVKYKRDFEESKGRGFSIVTDTPELQRLKRTQEQISNVKYHEDF 40 50 60 70 80 90 210 220 230 240 250 260 fh0252 EKTKGRGFTPVVDDPVIERVRKNTQVVSDAAYKGVHPHIVEMDRRPGIIVAPVLPGAYQQ :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: gi|217 EKTKGRGFTPVVDDPVTERVRKNTQVVSDAAYKGVHPHIVEMDRRPGIIVAPVLPGAYQQ 100 110 120 130 140 150 270 280 290 300 310 320 fh0252 SHSQGYGYMHQTSVSSMRSMQHSPNLRTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 SHSQGYGYMHQTSVSSMRSMQHSPNLRTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDG 160 170 180 190 200 210 330 340 fh0252 WMYGTVQRTGRTGMLPANYIEFVN :::::::::::::::::::::::: gi|217 WMYGTVQRTGRTGMLPANYIEFVN 220 230 >>gi|169158737|emb|CAQ14524.1| novel protein similar to (276 aa) initn: 1307 init1: 809 opt: 1361 Z-score: 1123.8 bits: 216.1 E(): 5.9e-54 Smith-Waterman score: 1361; 70.696% identity (88.278% similar) in 273 aa overlap (76-342:1-273) 50 60 70 80 90 100 fh0252 QEAVRGSPGDVTAAPGSQQPPPPPPPGTAIMNPQCARCGKVVYPTEKVNCLDKYWHKGCF :::.::::::.:: :::::::::::::::: gi|169 MNPHCARCGKIVYATEKVNCLDKYWHKGCF 10 20 30 110 120 130 140 150 160 fh0252 HCEVCKMALNMNNYKGYEKKPYCNAHYPKQSFTTVADTPENLRLKQQSELQSQVKYKRDF :::::::.::::::::::::::::::::::.:: ::::::::::.:::::::::::..:: gi|169 HCEVCKMTLNMNNYKGYEKKPYCNAHYPKQTFTIVADTPENLRLRQQSELQSQVKYRKDF 40 50 60 70 80 90 170 180 190 200 210 220 fh0252 EESKGRGFSIVTDTPELQRLKRTQEQISNVKYHEDFEKTKGRGFTPVVDDPVIER--VRK :.:::::...: ::::::::...:.::::.:::.::: . .: : . : . gi|169 EQSKGRGLKFVLDTPELQRLRKAQDQISNAKYHKDFEVSGLQGVTQGMRGTYAVRSQMTP 100 110 120 130 140 150 230 240 250 260 270 280 fh0252 NTQVVSDAAYKGVHPHIVEMDRRPGIIVAPVLPGAYQ-QSHSQGYGYMHQTSVSSMRSMQ :...:.....:.:: .:.:::::::.:::::::::: .:::.:..::::::. :.:::: gi|169 NNETVANSTHKAVHQYIMEMDRRPGVIVAPVLPGAYYPNSHSHGHSYMHQTSMHSLRSMQ 160 170 180 190 200 210 290 300 310 320 330 fh0252 ---HSPNLRTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPAN .. .. .:::.::: ::: ::::::::: : ::::::.::::::::::::.:::::: gi|169 LRSQQMSMTVYRALYDYMAQDYDEVSFRDGDIIQNVQPIDEGWMYGTVQRTGRSGMLPAN 220 230 240 250 260 270 340 fh0252 YIEFVN :.: gi|169 YVEGIR >>gi|60649653|gb|AAH90509.1| Zgc:113144 [Danio rerio] (276 aa) initn: 1252 init1: 809 opt: 1357 Z-score: 1120.6 bits: 215.5 E(): 9e-54 Smith-Waterman score: 1357; 70.330% identity (88.278% similar) in 273 aa overlap (76-342:1-273) 50 60 70 80 90 100 fh0252 QEAVRGSPGDVTAAPGSQQPPPPPPPGTAIMNPQCARCGKVVYPTEKVNCLDKYWHKGCF :::.::::::.:: :::::::::::::::: gi|606 MNPHCARCGKIVYATEKVNCLDKYWHKGCF 10 20 30 110 120 130 140 150 160 fh0252 HCEVCKMALNMNNYKGYEKKPYCNAHYPKQSFTTVADTPENLRLKQQSELQSQVKYKRDF :::::::.::::::::::::::::::::::.:: ::::::::::.:::::::::::..:: gi|606 HCEVCKMTLNMNNYKGYEKKPYCNAHYPKQTFTIVADTPENLRLRQQSELQSQVKYRKDF 40 50 60 70 80 90 170 180 190 200 210 220 fh0252 EESKGRGFSIVTDTPELQRLKRTQEQISNVKYHEDFEKTKGRGFTPVVDDPVIER--VRK :.:::::...: ::::::::...:.::::.:::.::: . .: : . : . gi|606 EQSKGRGLKFVLDTPELQRLRKAQDQISNAKYHKDFEVSGLQGVTQGMRGTYAVRSQMTP 100 110 120 130 140 150 230 240 250 260 270 280 fh0252 NTQVVSDAAYKGVHPHIVEMDRRPGIIVAPVLPGAYQ-QSHSQGYGYMHQTSVSSMRSMQ :...:.....:.:: .:.:::::::.:::::::::: .:::.:..::::::. :.::.: gi|606 NNETVANSTHKAVHQYIMEMDRRPGVIVAPVLPGAYYPSSHSHGHSYMHQTSMHSLRSLQ 160 170 180 190 200 210 290 300 310 320 330 fh0252 ---HSPNLRTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPAN .. .. .:::.::: ::: ::::::::: : ::::::.::::::::::::.:::::: gi|606 LRSQQMSMTVYRALYDYMAQDYDEVSFRDGDIIQNVQPIDEGWMYGTVQRTGRSGMLPAN 220 230 240 250 260 270 340 fh0252 YIEFVN :.: gi|606 YVEGIR 345 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sat Aug 9 11:05:00 2008 done: Sat Aug 9 11:07:35 2008 Total Scan time: 760.380 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]