hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-11073694/chunk_1/iprscan-20080809-11073694.nocrc
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Query sequence: fh02524
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00227                                                 124.6    1.1e-32   3
SM00326                                                  83.0    3.7e-20   1
SM00132                                                  61.7    9.4e-14   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00132    1/1      79   131 ..     1    52 []    61.7  9.4e-14
SM00227    1/3     137   167 ..     1    31 []    42.4  5.9e-08
SM00227    2/3     173   203 ..     1    31 []    48.5  8.7e-10
SM00227    3/3     209   239 ..     1    31 []    33.6  2.6e-05
SM00326    1/1     288   345 .]     1    58 []    83.0  3.7e-20

Alignments of top-scoring domains:
SM00132: domain 1 of 1, from 79 to 131: score 61.7, E = 9.4e-14
                   *->kCagCgkpItgdevlralgkvwHpeCFkCskCkkpLgg.tffekdgk
                       Ca+Cgk +++ e ++ l+k+wH+ CF+C++Ck+ L+ + +  ++ k
     fh02524    79    QCARCGKVVYPTEKVNCLDKYWHKGCFHCEVCKMALNMnNYKGYEKK 125  

                   lyCkdc<-*
                   +yC  +   
     fh02524   126 PYCNAH    131  

SM00227: domain 1 of 3, from 137 to 167: score 42.4, E = 5.9e-08
                   *->ytsvpDtPelehAKknqklqSdvkYKedyek<-*
                      +t v+DtPe ++ K+ ++lqS+vkYK d+e+   
     fh02524   137    FTTVADTPENLRLKQQSELQSQVKYKRDFEE    167  

SM00227: domain 2 of 3, from 173 to 203: score 48.5, E = 8.7e-10
                   *->ytsvpDtPelehAKknqklqSdvkYKedyek<-*
                      +++v+DtPel++ K+ q+++S+vkY+ed+ek   
     fh02524   173    FSIVTDTPELQRLKRTQEQISNVKYHEDFEK    203  

SM00227: domain 3 of 3, from 209 to 239: score 33.6, E = 2.6e-05
                   *->ytsvpDtPelehAKknqklqSdvkYKedyek<-*
                      +t+v D+P +e+++kn++ +Sd  YK  + +   
     fh02524   209    FTPVVDDPVIERVRKNTQVVSDAAYKGVHPH    239  

SM00326: domain 1 of 1, from 288 to 345: score 83.0, E = 3.7e-20
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleksddgWweGelnrtGkeG
                      ++++A+YDy aq+edE sF+ GD i  ++ +ddgW++G+++rtG++G
     fh02524   288    RTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTG 334  

                   lfPsnYVeeie<-*
                   + P+nY+e ++   
     fh02524   335 MLPANYIEFVN    345  

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