hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-11564176/chunk_1/iprscan-20080809-11564176.nocrc
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Query sequence: fh03701
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00516                                                 192.2    4.7e-53   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00516    1/1     327   500 ..     1   184 []   192.2  4.7e-53

Alignments of top-scoring domains:
SM00516: domain 1 of 1, from 327 to 500: score 192.2, E = 4.7e-53
                   *->elevgkayipggrigtregyDkdGrpVlieragrfdpkgllksvtle
                      ++ v++ y++gg++     +DkdGrp++++r+g++d+kgl++    e
     fh03701   327    PPQVLQDYYAGGWH----HHDKDGRPLYVLRLGQMDTKGLVRALGEE 369  

                   ellrylvyvlEkalqelpaklekktggiegftvifDlkglsmsnfwspdl
                    llry++++ E +l+++++ ++  +++i+++t+++Dl+gl+m+++w+p +
     fh03701   370 ALLRYVLSINEEGLRRCEENTKVFGRPISSWTCLVDLEGLNMRHLWRPGV 419  

                   sllrkilkilqdhYPErLgkvliiNpPwvmaffrvlwkiikpFldektre
                   + l+ i+++++++YPE+Lg++li ++P+    f+vlw++++pF+d+ tr+
     fh03701   420 KALLRIIEVVEANYPETLGRLLILRAPR---VFPVLWTLVSPFIDDNTRR 466  

                   KivfvgpnkVsdsdwkeeLlkyidpeqLPeelGGtlk<-*
                   K+ +  +    d    + Ll+yid+e +P++l G++    
     fh03701   467 KFLIYAG---NDYQGPGGLLDYIDKEIIPDFLSGECM    500  

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