# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofh03964.fasta.nr -Q fh03964.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fh03964, 1070 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6818952 sequences Expectation_n fit: rho(ln(x))= 5.8006+/-0.000195; mu= 11.6305+/- 0.011 mean_var=102.0217+/-19.636, 0's: 50 Z-trim: 80 B-trim: 227 in 2/65 Lambda= 0.126978 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62088212|dbj|BAD92553.1| TBP-associated factor (1070) 7078 1308.0 0 gi|119625698|gb|EAX05293.1| TAF1 RNA polymerase II (1927) 7078 1308.3 0 gi|149758503|ref|XP_001493340.1| PREDICTED: simila (1927) 7042 1301.7 0 gi|57013082|sp|Q8IZX4|TAF1L_HUMAN Transcription in (1826) 6038 1117.7 0 gi|171451946|dbj|BAG15901.1| TAF1 RNA polymerase I (1895) 5667 1049.8 0 gi|119625696|gb|EAX05291.1| TAF1 RNA polymerase II (1866) 5654 1047.4 0 gi|115942|sp|P21675|TAF1_HUMAN Transcription initi (1872) 5654 1047.4 0 gi|47777655|gb|AAT38105.1| TAF1 RNA polymerase II, (1893) 5654 1047.4 0 gi|119625700|gb|EAX05295.1| TAF1 RNA polymerase II (1863) 5635 1043.9 0 gi|119920228|ref|XP_001253221.1| PREDICTED: simila (1639) 5633 1043.5 0 gi|119920197|ref|XP_580963.3| PREDICTED: similar t (2029) 5633 1043.6 0 gi|149758507|ref|XP_001493312.1| PREDICTED: simila (1872) 5632 1043.4 0 gi|74007662|ref|XP_849327.1| PREDICTED: similar to (1871) 5631 1043.2 0 gi|74007664|ref|XP_549070.2| PREDICTED: similar to (1892) 5631 1043.2 0 gi|81871989|sp|Q60544|TAF1_MESAU Transcription ini (1865) 5598 1037.1 0 gi|62667061|ref|XP_228551.3| PREDICTED: similar to (1891) 5597 1036.9 0 gi|28958186|gb|AAH47418.1| Taf1 protein [Mus muscu (1291) 5591 1035.7 0 gi|123228959|emb|CAM21284.1| TAF1 RNA polymerase I (1870) 5591 1035.8 0 gi|134039180|sp|Q80UV9|TAF1_MOUSE Transcription in (1891) 5591 1035.9 0 gi|171451944|dbj|BAG15900.1| TAF1 RNA polymerase I (1893) 5577 1033.3 0 gi|162319606|gb|AAI56426.1| TAF1 RNA polymerase II (1902) 5571 1032.2 0 gi|149042183|gb|EDL95890.1| TAF1 RNA polymerase II (1826) 5490 1017.3 0 gi|148682192|gb|EDL14139.1| mCG2203 [Mus musculus] (1882) 5453 1010.6 0 gi|29733|emb|CAA30073.1| CCG1 protein [Homo sapien (1554) 4946 917.6 0 gi|63101645|gb|AAH94568.1| TAF1 RNA polymerase II, ( 929) 4871 903.7 0 gi|26338285|dbj|BAC32828.1| unnamed protein produc ( 749) 3706 690.2 9.4e-196 gi|24020894|gb|AAN40845.1| TBP-associated factor R ( 923) 3666 682.9 1.8e-193 gi|24020896|gb|AAN40846.1| TBP-associated factor R ( 923) 3664 682.6 2.3e-193 gi|24020890|gb|AAN40843.1| TBP-associated factor R ( 931) 3549 661.5 5e-187 gi|24020892|gb|AAN40844.1| TBP-associated factor R ( 923) 3533 658.6 3.8e-186 gi|24020886|gb|AAN40841.1| TBP-associated factor R ( 854) 3519 656.0 2.1e-185 gi|24020888|gb|AAN40842.1| TBP-associated factor R ( 854) 3500 652.5 2.4e-184 gi|146760137|emb|CAD70491.3| putative DYT3 protein ( 489) 3242 605.0 2.6e-170 gi|146455131|emb|CAM98556.1| dystonia 3 (with Park ( 491) 3228 602.5 1.6e-169 gi|94732241|emb|CAK04559.1| TAF1 RNA polymerase II (1947) 3114 582.1 8.4e-163 gi|2501986|gb|AAC62118.1| TAFII250 transcription f ( 440) 2862 535.4 2.2e-149 gi|47222558|emb|CAG02923.1| unnamed protein produc (1949) 2731 511.9 1.1e-141 gi|26341442|dbj|BAC34383.1| unnamed protein produc ( 360) 2346 440.8 5.4e-121 gi|146760139|emb|CAD70493.3| putative DYT3 protein ( 455) 2294 431.3 4.8e-118 gi|147223289|emb|CAD87527.2| putative DYT3 protein ( 457) 2283 429.3 1.9e-117 gi|34481755|emb|CAD70492.2| putative DYT3 protein ( 335) 2208 415.5 2.1e-113 gi|189235868|ref|XP_001811347.1| PREDICTED: simila (1881) 2050 387.2 3.9e-104 gi|194166872|gb|EDW81773.1| GK12244 [Drosophila wi (2118) 1983 374.9 2.1e-100 gi|193894874|gb|EDV93740.1| GH18122 [Drosophila gr (2143) 1981 374.6 2.7e-100 gi|194112040|gb|EDW34083.1| GL21765 [Drosophila pe (2137) 1979 374.2 3.5e-100 gi|54638971|gb|EAL28373.1| GA14575-PA [Drosophila (2174) 1979 374.2 3.5e-100 gi|194151622|gb|EDW67056.1| GJ23295 [Drosophila vi (2134) 1974 373.3 6.6e-100 gi|478993|pir||S32373 DNA-binding protein TAF-II 2 (1490) 1968 372.1 1.1e-99 gi|4389445|gb|AAD19815.1| transcription factor [Dr (2065) 1969 372.4 1.2e-99 gi|7327282|gb|AAB26991.2| transcription factor TFI (2068) 1969 372.4 1.2e-99 >>gi|62088212|dbj|BAD92553.1| TBP-associated factor 1 is (1070 aa) initn: 7078 init1: 7078 opt: 7078 Z-score: 7005.9 bits: 1308.0 E(): 0 Smith-Waterman score: 7078; 100.000% identity (100.000% similar) in 1070 aa overlap (1-1070:1-1070) 10 20 30 40 50 60 fh0396 HSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 HSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQ 10 20 30 40 50 60 70 80 90 100 110 120 fh0396 RLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADP 70 80 90 100 110 120 130 140 150 160 170 180 fh0396 TGCGEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TGCGEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEE 130 140 150 160 170 180 190 200 210 220 230 240 fh0396 IKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 IKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKV 190 200 210 220 230 240 250 260 270 280 290 300 fh0396 LSSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LSSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLAA 250 260 270 280 290 300 310 320 330 340 350 360 fh0396 GSAASGNNHRDDDTASVTSLNSSATGRCLKIYRTFRDEEGKEYVRCETVRKPAVIDAYVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GSAASGNNHRDDDTASVTSLNSSATGRCLKIYRTFRDEEGKEYVRCETVRKPAVIDAYVR 310 320 330 340 350 360 370 380 390 400 410 420 fh0396 IRTTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 IRTTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKE 370 380 390 400 410 420 430 440 450 460 470 480 fh0396 RPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELI 430 440 450 460 470 480 490 500 510 520 530 540 fh0396 KVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHR 490 500 510 520 530 540 550 560 570 580 590 600 fh0396 RRTDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RRTDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRK 550 560 570 580 590 600 610 620 630 640 650 660 fh0396 RLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAIN 610 620 630 640 650 660 670 680 690 700 710 720 fh0396 PLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKN 670 680 690 700 710 720 730 740 750 760 770 780 fh0396 ISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEK 730 740 750 760 770 780 790 800 810 820 830 840 fh0396 DICTAKEAALEEAELESLDPMTPGPYTPQPPDLYDTNTSLSMSRDASVFQDESNMSVLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DICTAKEAALEEAELESLDPMTPGPYTPQPPDLYDTNTSLSMSRDASVFQDESNMSVLDI 790 800 810 820 830 840 850 860 870 880 890 900 fh0396 PSATPEKQVTQMRQGRGRLGEEDSDVDIEGYDDEEEDGKPKTPAPEGEDGDGDLADEEEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PSATPEKQVTQMRQGRGRLGEEDSDVDIEGYDDEEEDGKPKTPAPEGEDGDGDLADEEEG 850 860 870 880 890 900 910 920 930 940 950 960 fh0396 TVQQPQASVLYEDLLMSEGEDDEEDAGSDEEGDNPFSAIQLSESGSDSDVGSGGIRPKQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TVQQPQASVLYEDLLMSEGEDDEEDAGSDEEGDNPFSAIQLSESGSDSDVGSGGIRPKQP 910 920 930 940 950 960 970 980 990 1000 1010 1020 fh0396 RMLQENTRMDMENEESMMSYEGDGGEASHGLEDSNISYGSYEEPDPKSNTQDTSFSSIGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RMLQENTRMDMENEESMMSYEGDGGEASHGLEDSNISYGSYEEPDPKSNTQDTSFSSIGG 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 fh0396 YEVSEEEEDEEEEEQRSGPSVLSQVHLSEDEEDSEDFHSIAGDSDLDSDE :::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 YEVSEEEEDEEEEEQRSGPSVLSQVHLSEDEEDSEDFHSIAGDSDLDSDE 1030 1040 1050 1060 1070 >>gi|119625698|gb|EAX05293.1| TAF1 RNA polymerase II, TA (1927 aa) initn: 7078 init1: 7078 opt: 7078 Z-score: 7002.6 bits: 1308.3 E(): 0 Smith-Waterman score: 7078; 100.000% identity (100.000% similar) in 1070 aa overlap (1-1070:858-1927) 10 20 30 fh0396 HSESSIRKRLKLCADFKRTGMDSNWWVLKS :::::::::::::::::::::::::::::: gi|119 LQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKS 830 840 850 860 870 880 40 50 60 70 80 90 fh0396 DFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDE 890 900 910 920 930 940 100 110 120 130 140 150 fh0396 VRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKK 950 960 970 980 990 1000 160 170 180 190 200 210 fh0396 TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSK 1010 1020 1030 1040 1050 1060 220 230 240 250 260 270 fh0396 FARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIEN 1070 1080 1090 1100 1110 1120 280 290 300 310 320 330 fh0396 MLQNKKTSSQLSREREEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MLQNKKTSSQLSREREEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLK 1130 1140 1150 1160 1170 1180 340 350 360 370 380 390 fh0396 IYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRR 1190 1200 1210 1220 1230 1240 400 410 420 430 440 450 fh0396 IQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTN 1250 1260 1270 1280 1290 1300 460 470 480 490 500 510 fh0396 APPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 APPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFP 1310 1320 1330 1340 1350 1360 520 530 540 550 560 570 fh0396 KQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFH 1370 1380 1390 1400 1410 1420 580 590 600 610 620 630 fh0396 TPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSL 1430 1440 1450 1460 1470 1480 640 650 660 670 680 690 fh0396 TQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSW 1490 1500 1510 1520 1530 1540 700 710 720 730 740 750 fh0396 PFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE 1550 1560 1570 1580 1590 1600 760 770 780 790 800 810 fh0396 SQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQP 1610 1620 1630 1640 1650 1660 820 830 840 850 860 870 fh0396 PDLYDTNTSLSMSRDASVFQDESNMSVLDIPSATPEKQVTQMRQGRGRLGEEDSDVDIEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PDLYDTNTSLSMSRDASVFQDESNMSVLDIPSATPEKQVTQMRQGRGRLGEEDSDVDIEG 1670 1680 1690 1700 1710 1720 880 890 900 910 920 930 fh0396 YDDEEEDGKPKTPAPEGEDGDGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGSDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YDDEEEDGKPKTPAPEGEDGDGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGSDE 1730 1740 1750 1760 1770 1780 940 950 960 970 980 990 fh0396 EGDNPFSAIQLSESGSDSDVGSGGIRPKQPRMLQENTRMDMENEESMMSYEGDGGEASHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EGDNPFSAIQLSESGSDSDVGSGGIRPKQPRMLQENTRMDMENEESMMSYEGDGGEASHG 1790 1800 1810 1820 1830 1840 1000 1010 1020 1030 1040 1050 fh0396 LEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEEQRSGPSVLSQVHLSED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEEQRSGPSVLSQVHLSED 1850 1860 1870 1880 1890 1900 1060 1070 fh0396 EEDSEDFHSIAGDSDLDSDE :::::::::::::::::::: gi|119 EEDSEDFHSIAGDSDLDSDE 1910 1920 >>gi|149758503|ref|XP_001493340.1| PREDICTED: similar to (1927 aa) initn: 7042 init1: 7042 opt: 7042 Z-score: 6966.9 bits: 1301.7 E(): 0 Smith-Waterman score: 7042; 99.439% identity (99.907% similar) in 1070 aa overlap (1-1070:858-1927) 10 20 30 fh0396 HSESSIRKRLKLCADFKRTGMDSNWWVLKS :::::::::::::::::::::::::::::: gi|149 LQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKS 830 840 850 860 870 880 40 50 60 70 80 90 fh0396 DFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDE 890 900 910 920 930 940 100 110 120 130 140 150 fh0396 VRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKK 950 960 970 980 990 1000 160 170 180 190 200 210 fh0396 TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSK 1010 1020 1030 1040 1050 1060 220 230 240 250 260 270 fh0396 FARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIEN 1070 1080 1090 1100 1110 1120 280 290 300 310 320 330 fh0396 MLQNKKTSSQLSREREEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MLQNKKTSSQLSREREEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLK 1130 1140 1150 1160 1170 1180 340 350 360 370 380 390 fh0396 IYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRR 1190 1200 1210 1220 1230 1240 400 410 420 430 440 450 fh0396 IQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTN 1250 1260 1270 1280 1290 1300 460 470 480 490 500 510 fh0396 APPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 APPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFP 1310 1320 1330 1340 1350 1360 520 530 540 550 560 570 fh0396 KQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFH 1370 1380 1390 1400 1410 1420 580 590 600 610 620 630 fh0396 TPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSL 1430 1440 1450 1460 1470 1480 640 650 660 670 680 690 fh0396 TQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSW 1490 1500 1510 1520 1530 1540 700 710 720 730 740 750 fh0396 PFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|149 PFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE 1550 1560 1570 1580 1590 1600 760 770 780 790 800 810 fh0396 SQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQP 1610 1620 1630 1640 1650 1660 820 830 840 850 860 870 fh0396 PDLYDTNTSLSMSRDASVFQDESNMSVLDIPSATPEKQVTQMRQGRGRLGEEDSDVDIEG :::::::::::::::::::::::::::::::.:::::::.:::::::::::::::::::: gi|149 PDLYDTNTSLSMSRDASVFQDESNMSVLDIPTATPEKQVAQMRQGRGRLGEEDSDVDIEG 1670 1680 1690 1700 1710 1720 880 890 900 910 920 930 fh0396 YDDEEEDGKPKTPAPEGEDGDGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGSDE :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|149 YDDEEEDGKPKTPAPEGEDADGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGSDE 1730 1740 1750 1760 1770 1780 940 950 960 970 980 990 fh0396 EGDNPFSAIQLSESGSDSDVGSGGIRPKQPRMLQENTRMDMENEESMMSYEGDGGEASHG ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|149 EGDNPFSAIQLSESGSDSDVGSGGIRPKQPRMLQENTRMGMENEESMMSYEGDGGEASHG 1790 1800 1810 1820 1830 1840 1000 1010 1020 1030 1040 1050 fh0396 LEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEEQRSGPSVLSQVHLSED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEEQRSGPSVLSQVHLSED 1850 1860 1870 1880 1890 1900 1060 1070 fh0396 EEDSEDFHSIAGDSDLDSDE ::::::::::.::::::::: gi|149 EEDSEDFHSIGGDSDLDSDE 1910 1920 >>gi|57013082|sp|Q8IZX4|TAF1L_HUMAN Transcription initia (1826 aa) initn: 6222 init1: 5374 opt: 6038 Z-score: 5973.2 bits: 1117.7 E(): 0 Smith-Waterman score: 6038; 94.623% identity (97.828% similar) in 967 aa overlap (1-967:856-1817) 10 20 30 fh0396 HSESSIRKRLKLCADFKRTGMDSNWWVLKS :::::::::::::::::::::::::::::: gi|570 LQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKS 830 840 850 860 870 880 40 50 60 70 80 90 fh0396 DFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDE :::::::::::: :::::::::::::::.::::::::::::::::::::::::::::::: gi|570 DFRLPTEEEIRAKVSPEQCCAYYSMIAAKQRLKDAGYGEKSFFAPEEENEEDFQMKIDDE 890 900 910 920 930 940 100 110 120 130 140 150 fh0396 VRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKK :..::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|570 VHAAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQAVKK 950 960 970 980 990 1000 160 170 180 190 200 210 fh0396 TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSK :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|570 TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQAHSGEGPMSK 1010 1020 1030 1040 1050 1060 220 230 240 250 260 270 fh0396 FARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIEN ::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::: gi|570 FARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSISAEDSDFEEMGKNIEN 1070 1080 1090 1100 1110 1120 280 290 300 310 320 330 fh0396 MLQNKKTSSQLSREREEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLK :::::::::::::: ::::::::.::::.::::::::::::: :::.:::.:::::.::: gi|570 MLQNKKTSSQLSREWEEQERKELRRMLLVAGSAASGNNHRDDVTASMTSLKSSATGHCLK 1130 1140 1150 1160 1170 1180 340 350 360 370 380 390 fh0396 IYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRR :::::::::::::::::::::::::::::::::::::.::.:::::::.::::::::::: gi|570 IYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEKFIQKFALFDEKHREEMRKERRR 1190 1200 1210 1220 1230 1240 400 410 420 430 440 450 fh0396 IQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 IQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTN 1250 1260 1270 1280 1290 1300 460 470 480 490 500 510 fh0396 APPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFP .:::.:::::::::::::::::::::::::::::::::.::::::.. :::::::::::: gi|570 VPPSKPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVFGKQLIENVHEVRRKSLVLKFP 1310 1320 1330 1340 1350 1360 520 530 540 550 560 570 fh0396 KQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFH :::::::::::::::::::::: :::::::::::::::::::::::::::::::::.::: gi|570 KQQLPPKKKRRVGTTVHCDYLNIPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTHPFH 1370 1380 1390 1400 1410 1420 580 590 600 610 620 630 fh0396 TPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSL :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|570 TPVNAKVVKDYYKIITRPMDLQTLRENVRKCLYPSREEFREHLELIVKNSATYNGPKHSL 1430 1440 1450 1460 1470 1480 640 650 660 670 680 690 fh0396 TQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 TQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSW 1490 1500 1510 1520 1530 1540 700 710 720 730 740 750 fh0396 PFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE ::::::::::::::::.::::.:::::::::::::::::::::::::::::::::::::: gi|570 PFHHPVNKKFVPDYYKMIVNPVDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE 1550 1560 1570 1580 1590 1600 760 770 780 790 800 810 fh0396 SQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQP ::::::::::::.::::.::::::::::::::::::::::::::::::::::::::: :: gi|570 SQYTKTAQEIVNICYQTITEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTSQP 1610 1620 1630 1640 1650 1660 820 830 840 850 860 870 fh0396 PDLYDTNTSLSMSRDASVFQDESNMSVLDIPSATPEKQVTQMRQGRGRLGEEDSDVDIEG ::.:::::::: ::::::::::::.::::: .:::::: : ::.:::::::::::.:: gi|570 PDMYDTNTSLSTSRDASVFQDESNLSVLDISTATPEKQ---MCQGQGRLGEEDSDVDVEG 1670 1680 1690 1700 1710 1720 880 890 900 910 920 930 fh0396 YDDEEEDGKPKTPAPEGEDGDGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGSDE ::::::::::: ::::: ::::::::::::::::.:::::::::.:::::::::::::: gi|570 YDDEEEDGKPKPPAPEG--GDGDLADEEEGTVQQPEASVLYEDLLISEGEDDEEDAGSDE 1730 1740 1750 1760 1770 1780 940 950 960 970 980 990 fh0396 EGDNPFSAIQLSESGSDSDVGSGGIRPKQPRMLQENTRMDMENEESMMSYEGDGGEASHG ::::::::::::::::::::: :::::::: :::. . gi|570 EGDNPFSAIQLSESGSDSDVGYGGIRPKQPFMLQHASGEHKDGHGK 1790 1800 1810 1820 1000 1010 1020 1030 1040 1050 fh0396 LEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEEQRSGPSVLSQVHLSED >>gi|171451946|dbj|BAG15901.1| TAF1 RNA polymerase II, T (1895 aa) initn: 5355 init1: 5355 opt: 5667 Z-score: 5605.7 bits: 1049.8 E(): 0 Smith-Waterman score: 6747; 96.642% identity (96.642% similar) in 1072 aa overlap (1-1070:858-1895) 10 20 30 fh0396 HSESSIRKRLKLCADFKRTGMDSNWWVLKS :::::::::::::::::::::::::::::: gi|171 LQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKS 830 840 850 860 870 880 40 50 60 70 80 90 fh0396 DFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 DFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDE 890 900 910 920 930 940 100 110 120 130 140 150 fh0396 VRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 VRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKK 950 960 970 980 990 1000 160 170 180 190 200 210 fh0396 TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSK 1010 1020 1030 1040 1050 1060 220 230 240 250 260 270 fh0396 FARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 FARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIEN 1070 1080 1090 1100 1110 1120 280 290 300 310 320 330 fh0396 MLQNKKTSSQLSREREEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 MLQNKKTSSQLSREREEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLK 1130 1140 1150 1160 1170 1180 340 350 360 370 380 390 fh0396 IYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 IYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRR 1190 1200 1210 1220 1230 1240 400 410 420 430 440 450 fh0396 IQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 IQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTN 1250 1260 1270 1280 1290 1300 460 470 480 490 500 510 fh0396 APPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 APPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFP 1310 1320 1330 1340 1350 1360 520 530 540 550 560 570 fh0396 KQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 KQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFH 1370 1380 1390 1400 1410 1420 580 590 600 610 620 630 fh0396 TPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 TPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSL 1430 1440 1450 1460 1470 1480 640 650 660 670 680 690 fh0396 TQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 TQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSW 1490 1500 1510 1520 1530 1540 700 710 720 730 740 750 fh0396 PFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 PFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE 1550 1560 1570 1580 1590 1600 760 770 780 790 800 fh0396 SQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQ- ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 SQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQA 1610 1620 1630 1640 1650 1660 810 820 830 840 850 860 fh0396 -PPDLYDTNTSLSMSRDASVFQDESNMSVLDIPSATPEKQVTQMRQGRGRLGEEDSDVDI :::::::::::::::::::::::::::::::::::::::::: gi|171 KPPDLYDTNTSLSMSRDASVFQDESNMSVLDIPSATPEKQVTQ----------------- 1670 1680 1690 1700 1710 870 880 890 900 910 920 fh0396 EGYDDEEEDGKPKTPAPEGEDGDGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGS ::::::::::::::::::::::::::::::::::::::::::: gi|171 -----------------EGEDGDGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGS 1720 1730 1740 1750 930 940 950 960 970 980 fh0396 DEEGDNPFSAIQLSESGSDSDVGSGGIRPKQPRMLQENTRMDMENEESMMSYEGDGGEAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 DEEGDNPFSAIQLSESGSDSDVGSGGIRPKQPRMLQENTRMDMENEESMMSYEGDGGEAS 1760 1770 1780 1790 1800 1810 990 1000 1010 1020 1030 1040 fh0396 HGLEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEEQRSGPSVLSQVHLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 HGLEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEEQRSGPSVLSQVHLS 1820 1830 1840 1850 1860 1870 1050 1060 1070 fh0396 EDEEDSEDFHSIAGDSDLDSDE :::::::::::::::::::::: gi|171 EDEEDSEDFHSIAGDSDLDSDE 1880 1890 >>gi|119625696|gb|EAX05291.1| TAF1 RNA polymerase II, TA (1866 aa) initn: 6539 init1: 5618 opt: 5654 Z-score: 5592.9 bits: 1047.4 E(): 0 Smith-Waterman score: 6435; 96.474% identity (96.670% similar) in 1021 aa overlap (1-1021:858-1844) 10 20 30 fh0396 HSESSIRKRLKLCADFKRTGMDSNWWVLKS :::::::::::::::::::::::::::::: gi|119 LQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKS 830 840 850 860 870 880 40 50 60 70 80 90 fh0396 DFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDE 890 900 910 920 930 940 100 110 120 130 140 150 fh0396 VRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKK 950 960 970 980 990 1000 160 170 180 190 200 210 fh0396 TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSK 1010 1020 1030 1040 1050 1060 220 230 240 250 260 270 fh0396 FARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIEN 1070 1080 1090 1100 1110 1120 280 290 300 310 320 330 fh0396 MLQNKKTSSQLSREREEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MLQNKKTSSQLSREREEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLK 1130 1140 1150 1160 1170 1180 340 350 360 370 380 390 fh0396 IYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRR 1190 1200 1210 1220 1230 1240 400 410 420 430 440 450 fh0396 IQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTN 1250 1260 1270 1280 1290 1300 460 470 480 490 500 510 fh0396 APPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 APPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFP 1310 1320 1330 1340 1350 1360 520 530 540 550 560 570 fh0396 KQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFH 1370 1380 1390 1400 1410 1420 580 590 600 610 620 630 fh0396 TPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSL 1430 1440 1450 1460 1470 1480 640 650 660 670 680 690 fh0396 TQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSW 1490 1500 1510 1520 1530 1540 700 710 720 730 740 750 fh0396 PFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE 1550 1560 1570 1580 1590 1600 760 770 780 790 800 810 fh0396 SQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQP 1610 1620 1630 1640 1650 1660 820 830 840 850 860 870 fh0396 PDLYDTNTSLSMSRDASVFQDESNMSVLDIPSATPEKQVTQMRQGRGRLGEEDSDVDIEG ::::::::::::::::::::::::::::::::::::::::: gi|119 PDLYDTNTSLSMSRDASVFQDESNMSVLDIPSATPEKQVTQ------------------- 1670 1680 1690 1700 880 890 900 910 920 930 fh0396 YDDEEEDGKPKTPAPEGEDGDGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGSDE ::::::::::::::::::::::::::::::::::::::::::::: gi|119 ---------------EGEDGDGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGSDE 1710 1720 1730 1740 1750 940 950 960 970 980 990 fh0396 EGDNPFSAIQLSESGSDSDVGSGGIRPKQPRMLQENTRMDMENEESMMSYEGDGGEASHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EGDNPFSAIQLSESGSDSDVGSGGIRPKQPRMLQENTRMDMENEESMMSYEGDGGEASHG 1760 1770 1780 1790 1800 1810 1000 1010 1020 1030 1040 1050 fh0396 LEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEEQRSGPSVLSQVHLSED :::::::::::::::::::::::::::::.. gi|119 LEDSNISYGSYEEPDPKSNTQDTSFSSIGNFRPGVVAHTCNLSTLGGRGGQIT 1820 1830 1840 1850 1860 1060 1070 fh0396 EEDSEDFHSIAGDSDLDSDE >>gi|115942|sp|P21675|TAF1_HUMAN Transcription initiatio (1872 aa) initn: 6825 init1: 5618 opt: 5654 Z-score: 5592.9 bits: 1047.4 E(): 0 Smith-Waterman score: 6761; 96.822% identity (96.822% similar) in 1070 aa overlap (1-1070:837-1872) 10 20 30 fh0396 HSESSIRKRLKLCADFKRTGMDSNWWVLKS :::::::::::::::::::::::::::::: gi|115 LQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKS 810 820 830 840 850 860 40 50 60 70 80 90 fh0396 DFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 DFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDE 870 880 890 900 910 920 100 110 120 130 140 150 fh0396 VRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 VRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKK 930 940 950 960 970 980 160 170 180 190 200 210 fh0396 TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSK 990 1000 1010 1020 1030 1040 220 230 240 250 260 270 fh0396 FARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 FARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIEN 1050 1060 1070 1080 1090 1100 280 290 300 310 320 330 fh0396 MLQNKKTSSQLSREREEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 MLQNKKTSSQLSREREEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLK 1110 1120 1130 1140 1150 1160 340 350 360 370 380 390 fh0396 IYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 IYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRR 1170 1180 1190 1200 1210 1220 400 410 420 430 440 450 fh0396 IQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 IQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTN 1230 1240 1250 1260 1270 1280 460 470 480 490 500 510 fh0396 APPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 APPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFP 1290 1300 1310 1320 1330 1340 520 530 540 550 560 570 fh0396 KQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 KQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFH 1350 1360 1370 1380 1390 1400 580 590 600 610 620 630 fh0396 TPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 TPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSL 1410 1420 1430 1440 1450 1460 640 650 660 670 680 690 fh0396 TQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 TQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSW 1470 1480 1490 1500 1510 1520 700 710 720 730 740 750 fh0396 PFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 PFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE 1530 1540 1550 1560 1570 1580 760 770 780 790 800 810 fh0396 SQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 SQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQP 1590 1600 1610 1620 1630 1640 820 830 840 850 860 870 fh0396 PDLYDTNTSLSMSRDASVFQDESNMSVLDIPSATPEKQVTQMRQGRGRLGEEDSDVDIEG ::::::::::::::::::::::::::::::::::::::::: gi|115 PDLYDTNTSLSMSRDASVFQDESNMSVLDIPSATPEKQVTQ------------------- 1650 1660 1670 1680 880 890 900 910 920 930 fh0396 YDDEEEDGKPKTPAPEGEDGDGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGSDE ::::::::::::::::::::::::::::::::::::::::::::: gi|115 ---------------EGEDGDGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGSDE 1690 1700 1710 1720 1730 940 950 960 970 980 990 fh0396 EGDNPFSAIQLSESGSDSDVGSGGIRPKQPRMLQENTRMDMENEESMMSYEGDGGEASHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 EGDNPFSAIQLSESGSDSDVGSGGIRPKQPRMLQENTRMDMENEESMMSYEGDGGEASHG 1740 1750 1760 1770 1780 1790 1000 1010 1020 1030 1040 1050 fh0396 LEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEEQRSGPSVLSQVHLSED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 LEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEEQRSGPSVLSQVHLSED 1800 1810 1820 1830 1840 1850 1060 1070 fh0396 EEDSEDFHSIAGDSDLDSDE :::::::::::::::::::: gi|115 EEDSEDFHSIAGDSDLDSDE 1860 1870 >>gi|47777655|gb|AAT38105.1| TAF1 RNA polymerase II, TAT (1893 aa) initn: 6825 init1: 5618 opt: 5654 Z-score: 5592.8 bits: 1047.4 E(): 0 Smith-Waterman score: 6761; 96.822% identity (96.822% similar) in 1070 aa overlap (1-1070:858-1893) 10 20 30 fh0396 HSESSIRKRLKLCADFKRTGMDSNWWVLKS :::::::::::::::::::::::::::::: gi|477 LQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKS 830 840 850 860 870 880 40 50 60 70 80 90 fh0396 DFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|477 DFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDE 890 900 910 920 930 940 100 110 120 130 140 150 fh0396 VRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|477 VRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKK 950 960 970 980 990 1000 160 170 180 190 200 210 fh0396 TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|477 TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSK 1010 1020 1030 1040 1050 1060 220 230 240 250 260 270 fh0396 FARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|477 FARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIEN 1070 1080 1090 1100 1110 1120 280 290 300 310 320 330 fh0396 MLQNKKTSSQLSREREEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|477 MLQNKKTSSQLSREREEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLK 1130 1140 1150 1160 1170 1180 340 350 360 370 380 390 fh0396 IYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|477 IYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRR 1190 1200 1210 1220 1230 1240 400 410 420 430 440 450 fh0396 IQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|477 IQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTN 1250 1260 1270 1280 1290 1300 460 470 480 490 500 510 fh0396 APPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|477 APPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFP 1310 1320 1330 1340 1350 1360 520 530 540 550 560 570 fh0396 KQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|477 KQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFH 1370 1380 1390 1400 1410 1420 580 590 600 610 620 630 fh0396 TPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|477 TPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSL 1430 1440 1450 1460 1470 1480 640 650 660 670 680 690 fh0396 TQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|477 TQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSW 1490 1500 1510 1520 1530 1540 700 710 720 730 740 750 fh0396 PFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|477 PFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE 1550 1560 1570 1580 1590 1600 760 770 780 790 800 810 fh0396 SQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|477 SQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQP 1610 1620 1630 1640 1650 1660 820 830 840 850 860 870 fh0396 PDLYDTNTSLSMSRDASVFQDESNMSVLDIPSATPEKQVTQMRQGRGRLGEEDSDVDIEG ::::::::::::::::::::::::::::::::::::::::: gi|477 PDLYDTNTSLSMSRDASVFQDESNMSVLDIPSATPEKQVTQ------------------- 1670 1680 1690 1700 880 890 900 910 920 930 fh0396 YDDEEEDGKPKTPAPEGEDGDGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGSDE ::::::::::::::::::::::::::::::::::::::::::::: gi|477 ---------------EGEDGDGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGSDE 1710 1720 1730 1740 1750 940 950 960 970 980 990 fh0396 EGDNPFSAIQLSESGSDSDVGSGGIRPKQPRMLQENTRMDMENEESMMSYEGDGGEASHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|477 EGDNPFSAIQLSESGSDSDVGSGGIRPKQPRMLQENTRMDMENEESMMSYEGDGGEASHG 1760 1770 1780 1790 1800 1810 1000 1010 1020 1030 1040 1050 fh0396 LEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEEQRSGPSVLSQVHLSED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|477 LEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEEQRSGPSVLSQVHLSED 1820 1830 1840 1850 1860 1870 1060 1070 fh0396 EEDSEDFHSIAGDSDLDSDE :::::::::::::::::::: gi|477 EEDSEDFHSIAGDSDLDSDE 1880 1890 >>gi|119625700|gb|EAX05295.1| TAF1 RNA polymerase II, TA (1863 aa) initn: 6522 init1: 5601 opt: 5635 Z-score: 5574.1 bits: 1043.9 E(): 0 Smith-Waterman score: 6412; 96.180% identity (96.376% similar) in 1021 aa overlap (1-1021:858-1841) 10 20 30 fh0396 HSESSIRKRLKLCADFKRTGMDSNWWVLKS :::::::::::::::::::::::::::::: gi|119 LQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKS 830 840 850 860 870 880 40 50 60 70 80 90 fh0396 DFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDE 890 900 910 920 930 940 100 110 120 130 140 150 fh0396 VRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKK 950 960 970 980 990 1000 160 170 180 190 200 210 fh0396 TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSK 1010 1020 1030 1040 1050 1060 220 230 240 250 260 270 fh0396 FARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIEN 1070 1080 1090 1100 1110 1120 280 290 300 310 320 330 fh0396 MLQNKKTSSQLSREREEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MLQNKKTSSQLSREREEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLK 1130 1140 1150 1160 1170 1180 340 350 360 370 380 390 fh0396 IYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRR 1190 1200 1210 1220 1230 1240 400 410 420 430 440 450 fh0396 IQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTN 1250 1260 1270 1280 1290 1300 460 470 480 490 500 510 fh0396 APPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 APPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFP 1310 1320 1330 1340 1350 1360 520 530 540 550 560 570 fh0396 KQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFH 1370 1380 1390 1400 1410 1420 580 590 600 610 620 630 fh0396 TPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSL 1430 1440 1450 1460 1470 1480 640 650 660 670 680 690 fh0396 TQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSW 1490 1500 1510 1520 1530 1540 700 710 720 730 740 750 fh0396 PFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE 1550 1560 1570 1580 1590 1600 760 770 780 790 800 810 fh0396 SQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQP 1610 1620 1630 1640 1650 1660 820 830 840 850 860 870 fh0396 PDLYDTNTSLSMSRDASVFQDESNMSVLDIPSATPEKQVTQMRQGRGRLGEEDSDVDIEG :::::::::::::::::::::::::::::::::::::: gi|119 PDLYDTNTSLSMSRDASVFQDESNMSVLDIPSATPEKQ---------------------- 1670 1680 1690 1700 880 890 900 910 920 930 fh0396 YDDEEEDGKPKTPAPEGEDGDGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGSDE ::::::::::::::::::::::::::::::::::::::::::::: gi|119 ---------------EGEDGDGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGSDE 1710 1720 1730 1740 1750 940 950 960 970 980 990 fh0396 EGDNPFSAIQLSESGSDSDVGSGGIRPKQPRMLQENTRMDMENEESMMSYEGDGGEASHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EGDNPFSAIQLSESGSDSDVGSGGIRPKQPRMLQENTRMDMENEESMMSYEGDGGEASHG 1760 1770 1780 1790 1800 1810 1000 1010 1020 1030 1040 1050 fh0396 LEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEEQRSGPSVLSQVHLSED :::::::::::::::::::::::::::::.. gi|119 LEDSNISYGSYEEPDPKSNTQDTSFSSIGNFRPGVVAHTCNLSTLGGRGGQIT 1820 1830 1840 1850 1860 1060 1070 fh0396 EEDSEDFHSIAGDSDLDSDE >>gi|119920228|ref|XP_001253221.1| PREDICTED: similar to (1639 aa) initn: 6596 init1: 5605 opt: 5633 Z-score: 5572.9 bits: 1043.5 E(): 0 Smith-Waterman score: 6704; 96.075% identity (96.636% similar) in 1070 aa overlap (1-1070:605-1639) 10 20 30 fh0396 HSESSIRKRLKLCADFKRTGMDSNWWVLKS :::::::::::::::::::::::::::::: gi|119 LQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKS 580 590 600 610 620 630 40 50 60 70 80 90 fh0396 DFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDE 640 650 660 670 680 690 100 110 120 130 140 150 fh0396 VRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKK 700 710 720 730 740 750 160 170 180 190 200 210 fh0396 TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSK 760 770 780 790 800 810 220 230 240 250 260 270 fh0396 FARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIEN :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|119 FARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEILSTDTDSSSAEDSDFEEMGKNIEN 820 830 840 850 860 870 280 290 300 310 320 330 fh0396 MLQNKKTSSQLSREREEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLK ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|119 MLQNKKTSSQLSREREEQERKELQRMILAAGSAASGNNHRDDDTASVTSLNSSATGRCLK 880 890 900 910 920 930 340 350 360 370 380 390 fh0396 IYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRR 940 950 960 970 980 990 400 410 420 430 440 450 fh0396 IQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTN 1000 1010 1020 1030 1040 1050 460 470 480 490 500 510 fh0396 APPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 APPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFP 1060 1070 1080 1090 1100 1110 520 530 540 550 560 570 fh0396 KQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFH 1120 1130 1140 1150 1160 1170 580 590 600 610 620 630 fh0396 TPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSL 1180 1190 1200 1210 1220 1230 640 650 660 670 680 690 fh0396 TQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSW 1240 1250 1260 1270 1280 1290 700 710 720 730 740 750 fh0396 PFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|119 PFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE 1300 1310 1320 1330 1340 1350 760 770 780 790 800 810 fh0396 SQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQP 1360 1370 1380 1390 1400 1410 820 830 840 850 860 870 fh0396 PDLYDTNTSLSMSRDASVFQDESNMSVLDIPSATPEKQVTQMRQGRGRLGEEDSDVDIEG :::::::::::::::::::::::::::::::.::::::::: gi|119 PDLYDTNTSLSMSRDASVFQDESNMSVLDIPTATPEKQVTQ------------------- 1420 1430 1440 1450 880 890 900 910 920 930 fh0396 YDDEEEDGKPKTPAPEGEDGDGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGSDE ::::.:::::::::::::::::::::::::::::::::::::::: gi|119 ---------------EGEDADGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGSDE 1460 1470 1480 1490 1500 940 950 960 970 980 990 fh0396 EGDNPFSAIQLSESGSDSDVGSGGIRPKQPRMLQENTRMDMENEESMMSYEGDGGEASHG ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|119 EGDNPFSAIQLSESGSDSDVGSGGIRPKQPRMLQENTRMGMENEESMMSYEGDGGEASHG 1510 1520 1530 1540 1550 1560 1000 1010 1020 1030 1040 1050 fh0396 LEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEEQRSGPSVLSQVHLSED ::::::::::::::::::::::::::::::::::::::::::: :::::::::::.:::: gi|119 LEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEE-QRSGPSVLSQVQLSED 1570 1580 1590 1600 1610 1060 1070 fh0396 EEDSEDFHSIAGDSDLDSDE :::::::::::::::::::: gi|119 EEDSEDFHSIAGDSDLDSDE 1620 1630 1070 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sat Aug 9 12:07:34 2008 done: Sat Aug 9 12:09:42 2008 Total Scan time: 1091.020 Total Display time: 0.830 Function used was FASTA [version 34.26.5 April 26, 2007]