hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090630/iprscan-20090630-19383376/chunk_1/iprscan-20090630-19383376.nocrc
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Query sequence: fh07519s2
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF04434.8.fs SWIM zinc finger                                20.3    6.8e-06   1
PF04434.8.ls SWIM zinc finger                                22.2     0.0011   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF04434.8.fs   1/1     257   293 ..     1    37 []    20.3  6.8e-06
PF04434.8.ls   1/1     257   293 ..     1    37 []    22.2   0.0011

Alignments of top-scoring domains:
PF04434.8.fs: domain 1 of 1, from 257 to 293: score 20.3, E = 6.8e-06
                   *->yrVqldld...lvkasCsCpdfqlygipCkHalAvllalg<-*
                      y V + +d+ ++  +sC+C++      +C H++A++l ++   
   fh07519s2   257    YNVAVMFDrcrVTSCSCTCGA---GAKCCTHVVALCLFRI    293  

PF04434.8.ls: domain 1 of 1, from 257 to 293: score 22.2, E = 0.0011
                   *->yrVqldld...lvkasCsCpdfqlygipCkHalAvllalg<-*
                      y V + +d+ ++  +sC+C++      +C H++A++l ++   
   fh07519s2   257    YNVAVMFDrcrVTSCSCTCGA---GAKCCTHVVALCLFRI    293  

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