# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofh08237.fasta.nr -Q fh08237.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fh08237, 392 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6823281 sequences Expectation_n fit: rho(ln(x))= 5.5921+/-0.000193; mu= 9.4219+/- 0.011 mean_var=102.0985+/-19.623, 0's: 36 Z-trim: 37 B-trim: 144 in 1/65 Lambda= 0.126930 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62088218|dbj|BAD92556.1| LAMP1 protein variant ( 392) 2653 496.0 5e-138 gi|18204186|gb|AAH21288.1| Lysosomal-associated me ( 417) 1789 337.9 2.2e-90 gi|193787339|dbj|BAG52545.1| unnamed protein produ ( 395) 1770 334.4 2.4e-89 gi|126376|sp|P11279.2|LAMP1_HUMAN Lysosome-associa ( 416) 1736 328.1 1.8e-87 gi|109121339|ref|XP_001087681.1| PREDICTED: lysoso ( 393) 1726 326.3 6.3e-87 gi|109121337|ref|XP_001087801.1| PREDICTED: lysoso ( 416) 1726 326.3 6.5e-87 gi|307132|gb|AAA59524.1| membrane glycoprotein ( 385) 1650 312.4 9.6e-83 gi|114650748|ref|XP_001144542.1| PREDICTED: simila ( 375) 1608 304.7 1.9e-80 gi|7669464|gb|AAF66141.1| lysosomal-associated mem ( 355) 1499 284.7 1.9e-74 gi|73989504|ref|XP_534193.2| PREDICTED: similar to ( 413) 1433 272.7 9.2e-71 gi|194222071|ref|XP_001495702.2| PREDICTED: simila ( 393) 1373 261.6 1.8e-67 gi|73989502|ref|XP_856022.1| PREDICTED: similar to ( 374) 1336 254.9 1.9e-65 gi|57282794|emb|CAF04757.1| lysosome-associated me ( 413) 1241 237.5 3.5e-60 gi|163099|gb|AAA30548.1| glycoprotein IIa ( 408) 1219 233.5 5.7e-59 gi|116242613|sp|Q05204.2|LAMP1_BOVIN Lysosome-asso ( 409) 1219 233.5 5.7e-59 gi|39644554|gb|AAH06345.2| LAMP1 protein [Homo sap ( 308) 1196 229.1 8.7e-58 gi|1346461|sp|P49129.1|LAMP1_CRIGR Lysosome-associ ( 407) 1117 214.8 2.4e-53 gi|200179|gb|AAA39869.1| P2B/LAMP-1 ( 405) 1083 208.6 1.8e-51 gi|18091799|gb|AAL58070.1| LAMP-1 [Mus musculus] ( 406) 1083 208.6 1.8e-51 gi|126377|sp|P11438.2|LAMP1_MOUSE Lysosome-associa ( 406) 1083 208.6 1.8e-51 gi|74196950|dbj|BAE35032.1| unnamed protein produc ( 406) 1078 207.6 3.4e-51 gi|12835945|dbj|BAB23428.1| unnamed protein produc ( 407) 1076 207.3 4.4e-51 gi|126378|sp|P14562.1|LAMP1_RAT Lysosome-associate ( 407) 1052 202.9 9.2e-50 gi|293692|gb|AAA39411.1| lysosomal membrane glycop ( 382) 1045 201.6 2.1e-49 gi|56578|emb|CAA32873.1| 107 kDa sialoglycoprotein ( 386) 1032 199.2 1.1e-48 gi|121044661|gb|ABM46909.1| lysosomal membrane gly ( 322) 970 187.8 2.6e-45 gi|39645231|gb|AAH07845.2| LAMP1 protein [Homo sap ( 248) 815 159.3 7.5e-37 gi|126337411|ref|XP_001374132.1| PREDICTED: simila ( 422) 787 154.4 3.8e-35 gi|67969619|dbj|BAE01158.1| unnamed protein produc ( 141) 766 150.1 2.5e-34 gi|50927192|gb|AAH79693.1| MGC80798 protein [Xenop ( 408) 690 136.6 8.3e-30 gi|50416223|gb|AAH77933.1| Lamp1-prov protein [Xen ( 417) 677 134.2 4.4e-29 gi|47230563|emb|CAF99756.1| unnamed protein produc ( 421) 674 133.7 6.5e-29 gi|40352930|gb|AAH64667.1| Zgc:64072 [Danio rerio] ( 411) 669 132.8 1.2e-28 gi|148690175|gb|EDL22122.1| lysosomal membrane gly ( 144) 592 118.2 1e-24 gi|74008247|ref|XP_864590.1| PREDICTED: similar to ( 411) 575 115.5 1.8e-23 gi|74008241|ref|XP_864542.1| PREDICTED: similar to ( 411) 575 115.5 1.8e-23 gi|74008245|ref|XP_851885.1| PREDICTED: similar to ( 412) 575 115.5 1.8e-23 gi|51950024|gb|AAH82411.1| MGC82091 protein [Xenop ( 415) 564 113.5 7.4e-23 gi|110645482|gb|AAI18743.1| Lamp2 protein [Xenopus ( 339) 560 112.7 1.1e-22 gi|169642731|gb|AAI60795.1| Lamp2 protein [Xenopus ( 388) 560 112.8 1.2e-22 gi|76780167|gb|AAI06650.1| LOC733384 protein [Xeno ( 419) 559 112.6 1.4e-22 gi|194044906|ref|XP_001926547.1| PREDICTED: simila ( 411) 546 110.2 7.2e-22 gi|194044904|ref|XP_001926493.1| PREDICTED: simila ( 411) 546 110.2 7.2e-22 gi|307110|gb|AAA60383.1| lysosomal membrane glycop ( 408) 545 110.0 8.2e-22 gi|1195542|gb|AAB35426.1| lysosome-associated memb ( 410) 545 110.0 8.2e-22 gi|1708854|sp|P13473.2|LAMP2_HUMAN Lysosome-associ ( 410) 545 110.0 8.2e-22 gi|45550060|gb|AAS67876.1| lysosomal-associated me ( 411) 545 110.0 8.2e-22 gi|67970736|dbj|BAE01710.1| unnamed protein produc ( 410) 542 109.5 1.2e-21 gi|109132122|ref|XP_001084005.1| PREDICTED: lysoso ( 480) 541 109.4 1.5e-21 gi|55732398|emb|CAH92900.1| hypothetical protein [ ( 410) 539 108.9 1.8e-21 >>gi|62088218|dbj|BAD92556.1| LAMP1 protein variant [Hom (392 aa) initn: 2653 init1: 2653 opt: 2653 Z-score: 2633.2 bits: 496.0 E(): 5e-138 Smith-Waterman score: 2653; 100.000% identity (100.000% similar) in 392 aa overlap (1-392:1-392) 10 20 30 40 50 60 fh0823 WSPSSLELTGLMHCASAAMFMVKNGNGTACIMANFSAAFSVNYDTKSGPKNMTFDLPSDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 WSPSSLELTGLMHCASAAMFMVKNGNGTACIMANFSAAFSVNYDTKSGPKNMTFDLPSDA 10 20 30 40 50 60 70 80 90 100 110 120 fh0823 TVVLNRSSCGKENTSDPSLVIAFGRGHTLTLNFTRNATRYSVQLMSFVYNLSDTHLFPNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TVVLNRSSCGKENTSDPSLVIAFGRGHTLTLNFTRNATRYSVQLMSFVYNLSDTHLFPNA 70 80 90 100 110 120 130 140 150 160 170 180 fh0823 SSKEIKTVESITDIRADIDKKYRCVSGTQVHMNNVTVTLHDATIQAYLSNSSFSRGETRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SSKEIKTVESITDIRADIDKKYRCVSGTQVHMNNVTVTLHDATIQAYLSNSSFSRGETRC 130 140 150 160 170 180 190 200 210 220 230 240 fh0823 EQDRPSPTTAPPAPPSPSPSPVPKSPSVDKYNVSGTNGTCLLASMGLQLNLTYERKDNTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EQDRPSPTTAPPAPPSPSPSPVPKSPSVDKYNVSGTNGTCLLASMGLQLNLTYERKDNTT 190 200 210 220 230 240 250 260 270 280 290 300 fh0823 VTRLLNINPNKTSASGSCGAHLVTLELHSEGTTVLLFQFGMVRLGRHLSGGAHCVSTTSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VTRLLNINPNKTSASGSCGAHLVTLELHSEGTTVLLFQFGMVRLGRHLSGGAHCVSTTSF 250 260 270 280 290 300 310 320 330 340 350 360 fh0823 CALGLLMGGSVRKEAASLFFCLPFILGFLVPWFPSPLSIPFIDAADDVGGAAVPTVGVAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 CALGLLMGGSVRKEAASLFFCLPFILGFLVPWFPSPLSIPFIDAADDVGGAAVPTVGVAA 310 320 330 340 350 360 370 380 390 fh0823 GEGMQAVRPSGFRCCCPVVPWWHFCLGGLLCS :::::::::::::::::::::::::::::::: gi|620 GEGMQAVRPSGFRCCCPVVPWWHFCLGGLLCS 370 380 390 >>gi|18204186|gb|AAH21288.1| Lysosomal-associated membra (417 aa) initn: 1789 init1: 1789 opt: 1789 Z-score: 1777.8 bits: 337.9 E(): 2.2e-90 Smith-Waterman score: 1789; 99.275% identity (99.275% similar) in 276 aa overlap (6-281:17-292) 10 20 30 40 fh0823 WSPSSLELTGLMHCASAAMFMVKNGNGTACIMANFSAAFSVNYDTKSGP : : :::::::::::::::::::::::::::::::::::::::: gi|182 MAAPGSARRPLLLLLLLLLLGLMHCASAAMFMVKNGNGTACIMANFSAAFSVNYDTKSGP 10 20 30 40 50 60 50 60 70 80 90 100 fh0823 KNMTFDLPSDATVVLNRSSCGKENTSDPSLVIAFGRGHTLTLNFTRNATRYSVQLMSFVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 KNMTFDLPSDATVVLNRSSCGKENTSDPSLVIAFGRGHTLTLNFTRNATRYSVQLMSFVY 70 80 90 100 110 120 110 120 130 140 150 160 fh0823 NLSDTHLFPNASSKEIKTVESITDIRADIDKKYRCVSGTQVHMNNVTVTLHDATIQAYLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 NLSDTHLFPNASSKEIKTVESITDIRADIDKKYRCVSGTQVHMNNVTVTLHDATIQAYLS 130 140 150 160 170 180 170 180 190 200 210 220 fh0823 NSSFSRGETRCEQDRPSPTTAPPAPPSPSPSPVPKSPSVDKYNVSGTNGTCLLASMGLQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 NSSFSRGETRCEQDRPSPTTAPPAPPSPSPSPVPKSPSVDKYNVSGTNGTCLLASMGLQL 190 200 210 220 230 240 230 240 250 260 270 280 fh0823 NLTYERKDNTTVTRLLNINPNKTSASGSCGAHLVTLELHSEGTTVLLFQFGMVRLGRHLS :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 NLTYERKDNTTVTRLLNINPNKTSASGSCGAHLVTLELHSEGTTVLLFQFGMNASSSRFF 250 260 270 280 290 300 290 300 310 320 330 340 fh0823 GGAHCVSTTSFCALGLLMGGSVRKEAASLFFCLPFILGFLVPWFPSPLSIPFIDAADDVG gi|182 LQGIQLNTILPDARDPAFKAANGSLRALQATVGNSYKCNAEEHVRVTKAFSVNIFKVWVQ 310 320 330 340 350 360 >>gi|193787339|dbj|BAG52545.1| unnamed protein product [ (395 aa) initn: 1770 init1: 1770 opt: 1770 Z-score: 1759.3 bits: 334.4 E(): 2.4e-89 Smith-Waterman score: 1770; 100.000% identity (100.000% similar) in 270 aa overlap (12-281:1-270) 10 20 30 40 50 60 fh0823 WSPSSLELTGLMHCASAAMFMVKNGNGTACIMANFSAAFSVNYDTKSGPKNMTFDLPSDA ::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 MHCASAAMFMVKNGNGTACIMANFSAAFSVNYDTKSGPKNMTFDLPSDA 10 20 30 40 70 80 90 100 110 120 fh0823 TVVLNRSSCGKENTSDPSLVIAFGRGHTLTLNFTRNATRYSVQLMSFVYNLSDTHLFPNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 TVVLNRSSCGKENTSDPSLVIAFGRGHTLTLNFTRNATRYSVQLMSFVYNLSDTHLFPNA 50 60 70 80 90 100 130 140 150 160 170 180 fh0823 SSKEIKTVESITDIRADIDKKYRCVSGTQVHMNNVTVTLHDATIQAYLSNSSFSRGETRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 SSKEIKTVESITDIRADIDKKYRCVSGTQVHMNNVTVTLHDATIQAYLSNSSFSRGETRC 110 120 130 140 150 160 190 200 210 220 230 240 fh0823 EQDRPSPTTAPPAPPSPSPSPVPKSPSVDKYNVSGTNGTCLLASMGLQLNLTYERKDNTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 EQDRPSPTTAPPAPPSPSPSPVPKSPSVDKYNVSGTNGTCLLASMGLQLNLTYERKDNTT 170 180 190 200 210 220 250 260 270 280 290 300 fh0823 VTRLLNINPNKTSASGSCGAHLVTLELHSEGTTVLLFQFGMVRLGRHLSGGAHCVSTTSF ::::::::::::::::::::::::::::::::::::::::: gi|193 VTRLLNINPNKTSASGSCGAHLVTLELHSEGTTVLLFQFGMNASSSRFFLQGIQLNTILP 230 240 250 260 270 280 310 320 330 340 350 360 fh0823 CALGLLMGGSVRKEAASLFFCLPFILGFLVPWFPSPLSIPFIDAADDVGGAAVPTVGVAA gi|193 DARDPAFKAANGSLRALQATVGNSYKCNAEEHVRVTKAFSVNIFKVWVQAFKVEGGQFGS 290 300 310 320 330 340 >>gi|126376|sp|P11279.2|LAMP1_HUMAN Lysosome-associated (416 aa) initn: 1736 init1: 1736 opt: 1736 Z-score: 1725.4 bits: 328.1 E(): 1.8e-87 Smith-Waterman score: 1736; 99.625% identity (100.000% similar) in 267 aa overlap (15-281:25-291) 10 20 30 40 50 fh0823 WSPSSLELTGLMHCASAAMFMVKNGNGTACIMANFSAAFSVNYDTKSGPK .::::::::::::::::::::::::::::::::::: gi|126 MAPRSARRPLLLLLPVAAARPHALSSAAMFMVKNGNGTACIMANFSAAFSVNYDTKSGPK 10 20 30 40 50 60 60 70 80 90 100 110 fh0823 NMTFDLPSDATVVLNRSSCGKENTSDPSLVIAFGRGHTLTLNFTRNATRYSVQLMSFVYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 NMTFDLPSDATVVLNRSSCGKENTSDPSLVIAFGRGHTLTLNFTRNATRYSVQLMSFVYN 70 80 90 100 110 120 120 130 140 150 160 170 fh0823 LSDTHLFPNASSKEIKTVESITDIRADIDKKYRCVSGTQVHMNNVTVTLHDATIQAYLSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LSDTHLFPNASSKEIKTVESITDIRADIDKKYRCVSGTQVHMNNVTVTLHDATIQAYLSN 130 140 150 160 170 180 180 190 200 210 220 230 fh0823 SSFSRGETRCEQDRPSPTTAPPAPPSPSPSPVPKSPSVDKYNVSGTNGTCLLASMGLQLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 SSFSRGETRCEQDRPSPTTAPPAPPSPSPSPVPKSPSVDKYNVSGTNGTCLLASMGLQLN 190 200 210 220 230 240 240 250 260 270 280 290 fh0823 LTYERKDNTTVTRLLNINPNKTSASGSCGAHLVTLELHSEGTTVLLFQFGMVRLGRHLSG ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LTYERKDNTTVTRLLNINPNKTSASGSCGAHLVTLELHSEGTTVLLFQFGMNASSSRFFL 250 260 270 280 290 300 300 310 320 330 340 350 fh0823 GAHCVSTTSFCALGLLMGGSVRKEAASLFFCLPFILGFLVPWFPSPLSIPFIDAADDVGG gi|126 QGIQLNTILPDARDPAFKAANGSLRALQATVGNSYKCNAEEHVRVTKAFSVNIFKVWVQA 310 320 330 340 350 360 >>gi|109121339|ref|XP_001087681.1| PREDICTED: lysosomal- (393 aa) initn: 1726 init1: 1726 opt: 1726 Z-score: 1715.8 bits: 326.3 E(): 6.3e-87 Smith-Waterman score: 1726; 96.014% identity (97.464% similar) in 276 aa overlap (6-281:16-291) 10 20 30 40 50 fh0823 WSPSSLELTGLMHCASAAMFMVKNGNGTACIMANFSAAFSVNYDTKSGPK : : :: ::::::::.::::::::::::::::::::::::::::: gi|109 MAAPGSARRSLLLLLLLLLGLTHCASAAMFIVKNGNGTACIMANFSAAFSVNYDTKSGPK 10 20 30 40 50 60 60 70 80 90 100 110 fh0823 NMTFDLPSDATVVLNRSSCGKENTSDPSLVIAFGRGHTLTLNFTRNATRYSVQLMSFVYN :::::::::: :::: ::::::::::::::::::::.::::::::::::::::::::::: gi|109 NMTFDLPSDAKVVLNSSSCGKENTSDPSLVIAFGRGQTLTLNFTRNATRYSVQLMSFVYN 70 80 90 100 110 120 120 130 140 150 160 170 fh0823 LSDTHLFPNASSKEIKTVESITDIRADIDKKYRCVSGTQVHMNNVTVTLHDATIQAYLSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LSDTHLFPNASSKEIKTVESITDIRADIDKKYRCVSGTQVHMNNVTVTLHDATIQAYLSN 130 140 150 160 170 180 180 190 200 210 220 230 fh0823 SSFSRGETRCEQDRPSPTTAPPAPPSPSPSPVPKSPSVDKYNVSGTNGTCLLASMGLQLN ::::: :::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|109 SSFSREETRCEQDRPSPTTAPPAPPSPSPSPVPESPSVDKYNVSGTNGTCLLASMGLQLN 190 200 210 220 230 240 240 250 260 270 280 290 fh0823 LTYERKDNTTVTRLLNINPNKTSASGSCGAHLVTLELHSEGTTVLLFQFGMVRLGRHLSG :::::::::::::::::::::: ::::::::::::::::::.::::::::: gi|109 LTYERKDNTTVTRLLNINPNKTLASGSCGAHLVTLELHSEGSTVLLFQFGMNASSSRFFL 250 260 270 280 290 300 300 310 320 330 340 350 fh0823 GAHCVSTTSFCALGLLMGGSVRKEAASLFFCLPFILGFLVPWFPSPLSIPFIDAADDVGG gi|109 QGIQLNTTLPDARDPAFKAANSSLRALQATVGNSYKCNAEEHVRVTKAFSVNIFKVWVQA 310 320 330 340 350 360 >>gi|109121337|ref|XP_001087801.1| PREDICTED: lysosomal- (416 aa) initn: 1726 init1: 1726 opt: 1726 Z-score: 1715.5 bits: 326.3 E(): 6.5e-87 Smith-Waterman score: 1726; 96.014% identity (97.464% similar) in 276 aa overlap (6-281:16-291) 10 20 30 40 50 fh0823 WSPSSLELTGLMHCASAAMFMVKNGNGTACIMANFSAAFSVNYDTKSGPK : : :: ::::::::.::::::::::::::::::::::::::::: gi|109 MAAPGSARRSLLLLLLLLLGLTHCASAAMFIVKNGNGTACIMANFSAAFSVNYDTKSGPK 10 20 30 40 50 60 60 70 80 90 100 110 fh0823 NMTFDLPSDATVVLNRSSCGKENTSDPSLVIAFGRGHTLTLNFTRNATRYSVQLMSFVYN :::::::::: :::: ::::::::::::::::::::.::::::::::::::::::::::: gi|109 NMTFDLPSDAKVVLNSSSCGKENTSDPSLVIAFGRGQTLTLNFTRNATRYSVQLMSFVYN 70 80 90 100 110 120 120 130 140 150 160 170 fh0823 LSDTHLFPNASSKEIKTVESITDIRADIDKKYRCVSGTQVHMNNVTVTLHDATIQAYLSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LSDTHLFPNASSKEIKTVESITDIRADIDKKYRCVSGTQVHMNNVTVTLHDATIQAYLSN 130 140 150 160 170 180 180 190 200 210 220 230 fh0823 SSFSRGETRCEQDRPSPTTAPPAPPSPSPSPVPKSPSVDKYNVSGTNGTCLLASMGLQLN ::::: :::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|109 SSFSREETRCEQDRPSPTTAPPAPPSPSPSPVPESPSVDKYNVSGTNGTCLLASMGLQLN 190 200 210 220 230 240 240 250 260 270 280 290 fh0823 LTYERKDNTTVTRLLNINPNKTSASGSCGAHLVTLELHSEGTTVLLFQFGMVRLGRHLSG :::::::::::::::::::::: ::::::::::::::::::.::::::::: gi|109 LTYERKDNTTVTRLLNINPNKTLASGSCGAHLVTLELHSEGSTVLLFQFGMNASSSRFFL 250 260 270 280 290 300 300 310 320 330 340 350 fh0823 GAHCVSTTSFCALGLLMGGSVRKEAASLFFCLPFILGFLVPWFPSPLSIPFIDAADDVGG gi|109 QGIQLNTTLPDARDPAFKAANSSLRALQATVGNSYKCNAEEHVRVTKAFSVNIFKVWVQA 310 320 330 340 350 360 >>gi|307132|gb|AAA59524.1| membrane glycoprotein (385 aa) initn: 1647 init1: 1647 opt: 1650 Z-score: 1640.7 bits: 312.4 E(): 9.6e-83 Smith-Waterman score: 1650; 98.444% identity (99.222% similar) in 257 aa overlap (25-281:4-260) 10 20 30 40 50 60 fh0823 WSPSSLELTGLMHCASAAMFMVKNGNGTACIMANFSAAFSVNYDTKSGPKNMTFDLPSDA :. . ::::::::::::::::::::::::::::::: gi|307 MARGGRVRCIMANFSAAFSVNYDTKSGPKNMTFDLPSDA 10 20 30 70 80 90 100 110 120 fh0823 TVVLNRSSCGKENTSDPSLVIAFGRGHTLTLNFTRNATRYSVQLMSFVYNLSDTHLFPNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|307 TVVLNRSSCGKENTSDPSLVIAFGRGHTLTLNFTRNATRYSVQLMSFVYNLSDTHLFPNA 40 50 60 70 80 90 130 140 150 160 170 180 fh0823 SSKEIKTVESITDIRADIDKKYRCVSGTQVHMNNVTVTLHDATIQAYLSNSSFSRGETRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|307 SSKEIKTVESITDIRADIDKKYRCVSGTQVHMNNVTVTLHDATIQAYLSNSSFSRGETRC 100 110 120 130 140 150 190 200 210 220 230 240 fh0823 EQDRPSPTTAPPAPPSPSPSPVPKSPSVDKYNVSGTNGTCLLASMGLQLNLTYERKDNTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|307 EQDRPSPTTAPPAPPSPSPSPVPKSPSVDKYNVSGTNGTCLLASMGLQLNLTYERKDNTT 160 170 180 190 200 210 250 260 270 280 290 300 fh0823 VTRLLNINPNKTSASGSCGAHLVTLELHSEGTTVLLFQFGMVRLGRHLSGGAHCVSTTSF ::::::::::::::::::::::::::::::::::::::::: gi|307 VTRLLNINPNKTSASGSCGAHLVTLELHSEGTTVLLFQFGMNASSSRFFLQGIQLNTILP 220 230 240 250 260 270 310 320 330 340 350 360 fh0823 CALGLLMGGSVRKEAASLFFCLPFILGFLVPWFPSPLSIPFIDAADDVGGAAVPTVGVAA gi|307 DARDPAFKAANGSLRALQATVGNSYKCNAEEHVRVTKAFSVNIFKVWVQAFKVEGGQFGS 280 290 300 310 320 330 >>gi|114650748|ref|XP_001144542.1| PREDICTED: similar to (375 aa) initn: 1608 init1: 1608 opt: 1608 Z-score: 1599.3 bits: 304.7 E(): 1.9e-80 Smith-Waterman score: 1608; 98.400% identity (99.600% similar) in 250 aa overlap (32-281:1-250) 10 20 30 40 50 60 fh0823 SPSSLELTGLMHCASAAMFMVKNGNGTACIMANFSAAFSVNYDTKSGPKNMTFDLPSDAT ::::::.::::::::::::::::::::::: gi|114 MANFSASFSVNYDTKSGPKNMTFDLPSDAT 10 20 30 70 80 90 100 110 120 fh0823 VVLNRSSCGKENTSDPSLVIAFGRGHTLTLNFTRNATRYSVQLMSFVYNLSDTHLFPNAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VVLNRSSCGKENTSDPSLVIAFGRGHTLTLNFTRNATRYSVQLMSFVYNLSDTHLFPNAS 40 50 60 70 80 90 130 140 150 160 170 180 fh0823 SKEIKTVESITDIRADIDKKYRCVSGTQVHMNNVTVTLHDATIQAYLSNSSFSRGETRCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SKEIKTVESITDIRADIDKKYRCVSGTQVHMNNVTVTLHDATIQAYLSNSSFSRGETRCE 100 110 120 130 140 150 190 200 210 220 230 240 fh0823 QDRPSPTTAPPAPPSPSPSPVPKSPSVDKYNVSGTNGTCLLASMGLQLNLTYERKDNTTV ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|114 QDRPSPTTAPPAPPSPSPSPVPESPSVDKYNVSGTNGTCLLASMGLQLNLTYERKDNTTV 160 170 180 190 200 210 250 260 270 280 290 300 fh0823 TRLLNINPNKTSASGSCGAHLVTLELHSEGTTVLLFQFGMVRLGRHLSGGAHCVSTTSFC ::::::::::::::::::::::::::::::.::::: ::: gi|114 TRLLNINPNKTSASGSCGAHLVTLELHSEGSTVLLFLFGMNASSSRFFLQGIQLNTTLPD 220 230 240 250 260 270 310 320 330 340 350 360 fh0823 ALGLLMGGSVRKEAASLFFCLPFILGFLVPWFPSPLSIPFIDAADDVGGAAVPTVGVAAG gi|114 ARDPAFKAANGSLRALQATVGNSYKCNAEEHVRVTKAFSVNIFKVWVQAFKVEGGQFGSV 280 290 300 310 320 330 >>gi|7669464|gb|AAF66141.1| lysosomal-associated membran (355 aa) initn: 1499 init1: 1499 opt: 1499 Z-score: 1491.7 bits: 284.7 E(): 1.9e-74 Smith-Waterman score: 1499; 99.567% identity (99.567% similar) in 231 aa overlap (51-281:1-231) 30 40 50 60 70 80 fh0823 MVKNGNGTACIMANFSAAFSVNYDTKSGPKNMTFDLPSDATVVLNRSSCGKENTSDPSLV :::::::::::::::::::::::::::::: gi|766 NMTFDLPSDATVVLNRSSCGKENTSDPSLV 10 20 30 90 100 110 120 130 140 fh0823 IAFGRGHTLTLNFTRNATRYSVQLMSFVYNLSDTHLFPNASSKEIKTVESITDIRADIDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 IAFGRGHTLTLNFTRNATRYSVQLMSFVYNLSDTHLFPNASSKEIKTVESITDIRADIDK 40 50 60 70 80 90 150 160 170 180 190 200 fh0823 KYRCVSGTQVHMNNVTVTLHDATIQAYLSNSSFSRGETRCEQDRPSPTTAPPAPPSPSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 KYRCVSGTQVHMNNVTVTLHDATIQAYLSNSSFSRGETRCEQDRPSPTTAPPAPPSPSPS 100 110 120 130 140 150 210 220 230 240 250 260 fh0823 PVPKSPSVDKYNVSGTNGTCLLASMGLQLNLTYERKDNTTVTRLLNINPNKTSASGSCGA :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|766 PVPKSPSVDKYNVSGTNGTCLLASMGLQLNLTYERKDNTTVTRLLNINPNTTSASGSCGA 160 170 180 190 200 210 270 280 290 300 310 320 fh0823 HLVTLELHSEGTTVLLFQFGMVRLGRHLSGGAHCVSTTSFCALGLLMGGSVRKEAASLFF ::::::::::::::::::::: gi|766 HLVTLELHSEGTTVLLFQFGMNASSSRFFLQGIQLNTILPDARDPAFKAANGSLRALQAT 220 230 240 250 260 270 >>gi|73989504|ref|XP_534193.2| PREDICTED: similar to Lys (413 aa) initn: 1191 init1: 1191 opt: 1433 Z-score: 1425.5 bits: 272.7 E(): 9.2e-71 Smith-Waterman score: 1433; 78.623% identity (94.203% similar) in 276 aa overlap (6-281:15-288) 10 20 30 40 50 fh0823 WSPSSLELTGLMHCASAAMFMVKNGNGTACIMANFSAAFSVNYDTKSGPKN : :.::.: : ::.:.::..:::::::::::::: ..:.:.::::: gi|739 MAAFGGARPRPLLLLLLAGLVHGA-AAVFVVKDANGTACIMANFSAAFLASYETRSGPKN 10 20 30 40 50 60 70 80 90 100 110 fh0823 MTFDLPSDATVVLNRSSCGKENTSDPSLVIAFGRGHTLTLNFTRNATRYSVQLMSFVYNL .:::::::: :::: :::::::::::::.::::.:: :::::::::::::::::::.::: gi|739 VTFDLPSDA-VVLNSSSCGKENTSDPSLMIAFGKGHGLTLNFTRNATRYSVQLMSFIYNL 60 70 80 90 100 110 120 130 140 150 160 170 fh0823 SDTHLFPNASSKEIKTVESITDIRADIDKKYRCVSGTQVHMNNVTVTLHDATIQAYLSNS :::..:::::::: ::::: :::::::.:::::::.::.::.:::::.::.::::::.:: gi|739 SDTQIFPNASSKETKTVESATDIRADINKKYRCVSNTQIHMHNVTVTFHDVTIQAYLANS 120 130 140 150 160 170 180 190 200 210 220 230 fh0823 SFSRGETRCEQDRPSPTTAPPAPPSPSPSPVPKSPSVDKYNVSGTNGTCLLASMGLQLNL .::. ::::::: : :::::: :: :::::.:.:::: ::::::.::::::::::::::. gi|739 NFSKEETRCEQDGPFPTTAPPPPPHPSPSPAPESPSVHKYNVSGANGTCLLASMGLQLNV 180 190 200 210 220 230 240 250 260 270 280 290 fh0823 TYERKDNTTVTRLLNINPNKTSASGSCGAHLVTLELHSEGTTVLLFQFGMVRLGRHLSGG ::..::::::.....::::::.:.:::::.::::::.::..:.: ::::: gi|739 TYKKKDNTTVVKVVSINPNKTTAGGSCGAQLVTLELRSESVTLLAFQFGMNASTSRFFLQ 240 250 260 270 280 290 300 310 320 330 340 350 fh0823 AHCVSTTSFCALGLLMGGSVRKEAASLFFCLPFILGFLVPWFPSPLSIPFIDAADDVGGA gi|739 GIQLNMTLPDARDPTFKAGNNSLRALQATIGNSYKCNAGEHVQVTEAFSVNIIKVWVQAF 300 310 320 330 340 350 392 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sat Aug 9 13:10:36 2008 done: Sat Aug 9 13:13:06 2008 Total Scan time: 805.370 Total Display time: 0.070 Function used was FASTA [version 34.26.5 April 26, 2007]