hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080809/iprscan-20080809-13395341/chunk_1/iprscan-20080809-13395341.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: fh08980 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00454.17.ls Phosphatidylinositol 3- and 4-kinase 318.3 1.3e-92 1 PF00454.17.fs Phosphatidylinositol 3- and 4-kinase 316.7 3.9e-92 1 PF00613.10.fs Phosphoinositide 3-kinase family, acce 244.9 5.9e-72 1 PF00613.10.ls Phosphoinositide 3-kinase family, acce 244.5 2.1e-70 1 PF00792.14.ls Phosphoinositide 3-kinase C2 235.8 8.7e-68 1 PF00792.14.fs Phosphoinositide 3-kinase C2 233.9 3.1e-67 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00792.14.fs 1/1 65 210 .. 1 179 [] 233.9 3.1e-67 PF00792.14.ls 1/1 65 210 .. 1 179 [] 235.8 8.7e-68 PF00613.10.fs 1/1 296 521 .. 1 191 [. 244.9 5.9e-72 PF00613.10.ls 1/1 296 542 .. 1 213 [] 244.5 2.1e-70 PF00454.17.fs 1/1 642 845 .. 1 329 [] 316.7 3.9e-92 PF00454.17.ls 1/1 642 845 .. 1 329 [] 318.3 1.3e-92 Alignments of top-scoring domains: PF00792.14.fs: domain 1 of 1, from 65 to 210: score 233.9, E = 3.1e-67 *->kysdlyvecslyDghggkpLclpvqsTsykpfskSlldgffssvkWn ++sdlyv+c+++ gkpL+lpv +Tsyk+fs +++Wn fh08980 65 TCSDLYVTCQVF--AEGKPLALPV-RTSYKAFS--------TRWNWN 100 ewltFprikisdLPrdArLvltlyeisgksksesstdeiKldaneskkve ewl++p +k++dLPr+A+ lt+++++g+ k+ + fh08980 101 EWLKLP-VKYPDLPRNAQVALTIWDVYGPGKA-----------------V 132 plGwvnlsLFdkekgiLrqGpqlLsltWpskepdgsvptsTPGKvqlal. p+G++++sLF+k g++rqG+++L++ Wp +e+dgs+pt+TPG+++++l+ fh08980 133 PVGGTTVSLFGK-YGMFRQGMHDLKV-WPNVEADGSEPTKTPGRTSSTLs 180 rdelnrLekllkkyerGdvqsnpvvdwlDfltl<-* +d+++rL kl+k++++G++++ vdwlD+lt+ fh08980 181 EDQMSRLAKLTKAHRQGHMVK---VDWLDRLTF 210 PF00792.14.ls: domain 1 of 1, from 65 to 210: score 235.8, E = 8.7e-68 *->kysdlyvecslyDghggkpLclpvqsTsykpfskSlldgffssvkWn ++sdlyv+c+++ gkpL+lpv +Tsyk+fs +++Wn fh08980 65 TCSDLYVTCQVF--AEGKPLALPV-RTSYKAFS--------TRWNWN 100 ewltFprikisdLPrdArLvltlyeisgksksesstdeiKldaneskkve ewl++p +k++dLPr+A+ lt+++++g+ k+ + fh08980 101 EWLKLP-VKYPDLPRNAQVALTIWDVYGPGKA-----------------V 132 plGwvnlsLFdkekgiLrqGpqlLsltWpskepdgsvptsTPGKvqlal. p+G++++sLF+k g++rqG+++L++ Wp +e+dgs+pt+TPG+++++l+ fh08980 133 PVGGTTVSLFGK-YGMFRQGMHDLKV-WPNVEADGSEPTKTPGRTSSTLs 180 rdelnrLekllkkyerGdvqsnpvvdwlDfltl<-* +d+++rL kl+k++++G++++ vdwlD+lt+ fh08980 181 EDQMSRLAKLTKAHRQGHMVK---VDWLDRLTF 210 PF00613.10.fs: domain 1 of 1, from 296 to 521: score 244.9, E = 5.9e-72 *->kdlkpNlnekerkeleaIlayDPlskLtaeEkdLiWkfRhysltsnP dlkp n ++r++l+ I++y+P+ +Lt eE dL+WkfR y+lt+ fh08980 296 HDLKP--NAATRDQLNIIVSYPPTKQLTYEEQDLVWKFR-YYLTNQE 339 kALtLmCVGPKlLlLSVkWsdlsevaealsLldkRvWapidpvdALELLd kALt K+L+ +V+W ++e+++al+Ll k W p d++d+LELL+ fh08980 340 KALT------KFLK-CVNWDLPQEAKQALELLGK--WKPMDVEDSLELLS 380 pkFadkteeVReYAVkcLesYasDeELlfYLLQLVQALKYEnl....... + +++ + VR+YAV +L++ a+De+Ll YLLQLVQALKYEn+++ +++ fh08980 381 SHYTN--PTVRRYAVARLRQ-ADDEDLLMYLLQLVQALKYENFddikngl 427 .................................................. ++++++++++ +++ ++++ ++ + ++++ +++ ++ +++++ +++++ fh08980 428 eptkkdsqssvsenvsnsginsaeidssqiitsplpsvsspppasktkev 477 .depfhdSpLsrFLlqRAlkNrsrlGHfFfWyLksEiYkDdeghdkdvIs +d+ + +L FL+ RA kN l++ ++Wy+ +E+ +d+d + fh08980 478 pDGENLEQDLCTFLISRACKNS-TLANYLYWYVIVEC------EDQDT-Q 519 er<-* +r fh08980 520 QR 521 PF00613.10.ls: domain 1 of 1, from 296 to 542: score 244.5, E = 2.1e-70 *->kdlkpNlnekerkeleaIlayDPlskLtaeEkdLiWkfRhysltsnP dlkp n ++r++l+ I++y+P+ +Lt eE dL+WkfR y+lt+ fh08980 296 HDLKP--NAATRDQLNIIVSYPPTKQLTYEEQDLVWKFR-YYLTNQE 339 kALtLmCVGPKlLlLSVkWsdlsevaealsLldkRvWapidpvdALELLd kALt K+L+ +V+W ++e+++al+Ll k W p d++d+LELL+ fh08980 340 KALT------KFLK-CVNWDLPQEAKQALELLGK--WKPMDVEDSLELLS 380 pkFadkteeVReYAVkcLesYasDeELlfYLLQLVQALKYEnl....... + +++ + VR+YAV +L++ a+De+Ll YLLQLVQALKYEn+++ +++ fh08980 381 SHYTN--PTVRRYAVARLRQ-ADDEDLLMYLLQLVQALKYENFddikngl 427 .................................................. ++++++++++ +++ ++++ ++ + ++++ +++ ++ +++++ +++++ fh08980 428 eptkkdsqssvsenvsnsginsaeidssqiitsplpsvsspppasktkev 477 .depfhdSpLsrFLlqRAlkNrsrlGHfFfWyLksEiYkDdeghdkdvIs +d+ + +L FL+ RA kN l++ ++Wy+ +E+ +d+d + fh08980 478 pDGENLEQDLCTFLISRACKNS-TLANYLYWYVIVEC------EDQDT-Q 519 erFgvllEsylrecdstsleglnk<-* +r + E yl + + + l k fh08980 520 QRDPKTHEMYLNVM-RRFSQALLK 542 PF00454.17.fs: domain 1 of 1, from 642 to 845: score 316.7, E = 3.9e-92 *->gypfifKgGdDLrsrQDelvlQligVfKPkDEEPyApnNPkgtkvsq yp+ifK+GdDLr QD+l+lQ+i fh08980 642 KYPVIFKHGDDLR--QDQLILQII----------------------- 663 GerlmnkllkgegldrrRnlqltaYlviplgpgsGlIEwvpnsttlaeil +lm+kll++e+ld++ lt+Y+v+++++++G+++++ ++ + ae+l fh08980 664 --SLMDKLLRKENLDLK----LTPYKVLATSTKHGFMQFIQSV-PVAEVL 706 rtymvkkaikdfnksrffkdkkttkkleknakllkehkllqmvldrkqlt +t fh08980 707 DTE----------------------------------------------- 709 llekvevFeeklsntpkpgllqwFvkknpda.apyeewfeRfardnfvrS +++ ++F+k+ p++++p+++ e ++d++v+S fh08980 710 -----------------GSIQNFFRKYAPSEnGPNGISAE--VMDTYVKS 740 cAgmsvldYiLGigDRHldNiLvkkndkktGklfHIDFGlcfghvkgkrg cAg++v++YiLG+gDRHldN+L+ +ktGklfHIDFG+++g r+ fh08980 741 CAGYCVITYILGVGDRHLDNLLL----TKTGKLFHIDFGYILG-----RD 781 pkpervPFrLTrWPQaklpmveamggyiasLgpsgdeglFrelceeayra pkp ++P++L + +mve+mgg +s+ +++Fr+ c++a+++ fh08980 782 PKPLPPPMKLNK------EMVEGMGG-----TQSEQYQEFRKQCYTAFLH 820 lRrnanlllnlLkkkAvarGelmledglpdwrs<-* lRr++nl+lnl+ +lm+++++pd+ fh08980 821 LRRYSNLILNLF--------SLMVDANIPDIAL 845 PF00454.17.ls: domain 1 of 1, from 642 to 845: score 318.3, E = 1.3e-92 *->gypfifKgGdDLrsrQDelvlQligVfKPkDEEPyApnNPkgtkvsq yp+ifK+GdDLr QD+l+lQ+i fh08980 642 KYPVIFKHGDDLR--QDQLILQII----------------------- 663 GerlmnkllkgegldrrRnlqltaYlviplgpgsGlIEwvpnsttlaeil +lm+kll++e+ld++ lt+Y+v+++++++G+++++ ++ + ae+l fh08980 664 --SLMDKLLRKENLDLK----LTPYKVLATSTKHGFMQFIQSV-PVAEVL 706 rtymvkkaikdfnksrffkdkkttkkleknakllkehkllqmvldrkqlt +t fh08980 707 DTE----------------------------------------------- 709 llekvevFeeklsntpkpgllqwFvkknpda.apyeewfeRfardnfvrS +++ ++F+k+ p++++p+++ e ++d++v+S fh08980 710 -----------------GSIQNFFRKYAPSEnGPNGISAE--VMDTYVKS 740 cAgmsvldYiLGigDRHldNiLvkkndkktGklfHIDFGlcfghvkgkrg cAg++v++YiLG+gDRHldN+L+ +ktGklfHIDFG+++g r+ fh08980 741 CAGYCVITYILGVGDRHLDNLLL----TKTGKLFHIDFGYILG-----RD 781 pkpervPFrLTrWPQaklpmveamggyiasLgpsgdeglFrelceeayra pkp ++P++L + +mve+mgg +s+ +++Fr+ c++a+++ fh08980 782 PKPLPPPMKLNK------EMVEGMGG-----TQSEQYQEFRKQCYTAFLH 820 lRrnanlllnlLkkkAvarGelmledglpdwrs<-* lRr++nl+lnl+ +lm+++++pd+ fh08980 821 LRRYSNLILNLF--------SLMVDANIPDIAL 845 //