hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-13395341/chunk_1/iprscan-20080809-13395341.nocrc
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Query sequence: fh08980
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00146                                                 412.2   2.8e-119   1
SM00145                                                 386.4   1.7e-111   1
SM00142                                                 158.6    6.5e-43   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00142      1/1      33   142 ..     1   133 []   158.6  6.5e-43
SM00145      1/1     295   542 ..     1   232 []   386.4 1.7e-111
SM00146      1/1     644   896 ..     1   336 []   412.2 2.8e-119

Alignments of top-scoring domains:
SM00142: domain 1 of 1, from 33 to 142: score 158.6, E = 6.5e-43
                   *->vkiesLwdgkrplvalPhestialihgiplnwsslyesscvdlyvei
                      +ki+sL+ gkr+++     s++a +++++l++s+ly+++c+dlyv++
     fh08980    33    LKIGSLE-GKREQK-----SYKAVLEDPMLKFSGLYQETCSDLYVTC 73   

                   qLyhGvgkllclpvsTsyknyvkaffnrtiiltvkWnewltftpikisdL
                   q++   gk+l+lpv+Tsy    kaf++r     ++Wnewl++ p+k++dL
     fh08980    74 QVFAE-GKPLALPVRTSY----KAFSTR-----WNWNEWLKL-PVKYPDL 112  

                   PreArLcitiyevkddskksepfgsvlVgssnlslf<-*
                   Pr+A+ ++ti++v+  + k++p+     g++++slf   
     fh08980   113 PRNAQVALTIWDVYG-PGKAVPV-----GGTTVSLF    142  

SM00145: domain 1 of 1, from 295 to 542: score 386.4, E = 1.7e-111
                   *->drdlkpsldseerdrLeaIlkydplyeLteeekdLiWkfRhyyltnn
                      d+dlkp  +  +rd+L  I++y+p+++Lt+ee+dL+WkfR yyltn+
     fh08980   295    DHDLKP--NAATRDQLNIIVSYPPTKQLTYEEQDLVWKFR-YYLTNQ 338  

                   pkALplvcgPKfLlsvnWsdadevaqalsLLkkWvnapldpedALELLdp
                    kAL+     KfL++vnW+ ++e++qal+LL kW  +p+d+ed+LELL++
     fh08980   339 EKALT-----KFLKCVNWDLPQEAKQALELLGKW--KPMDVEDSLELLSS 381  

                   kFpdnNvpkVRayAVsrLesasDeeLllYLLQLVQALKYEnlddiks.le
                   ++++   p VR+yAV rL++a+De+Ll+YLLQLVQALKYEn+ddik++le
     fh08980   382 HYTN---PTVRRYAVARLRQADDEDLLMYLLQLVQALKYENFDDIKNgLE 428  

                   cef.dqd.v.s...............................asktke.e
                   ++++d++++ s++ ++++ ++ + ++++  +++ ++ +++++asktke +
     fh08980   429 PTKkDSQsSvSenvsnsginsaeidssqiitsplpsvsspppASKTKEvP 478  

                   dgpyldSpLarFLLeRAlkNpriGhffyWyLksEiekddslhdphvserf
                   dg +l+ +L++FL++RA+kN ++++++yWy+ +E+      +d++ ++r 
     fh08980   479 DGENLEQDLCTFLISRACKNSTLANYLYWYVIVEC------EDQDTQQRD 522  

                   gllleaylrgctgthlkelkk<-*
                     ++e+yl+++  + ++ l+k   
     fh08980   523 PKTHEMYLNVM-RRFSQALLK    542  

SM00146: domain 1 of 1, from 644 to 896: score 412.2, E = 2.8e-119
                   *->avIfKggDDLRQDalvlQllrlmdklLkkdsetrrldLhlrpYkvlp
                      +vIfK+gDDLRQD+l+lQ+++lmdklL+k+    +ldL+l+pYkvl+
     fh08980   644    PVIFKHGDDLRQDQLILQIISLMDKLLRKE----NLDLKLTPYKVLA 686  

                   tgpksGliEvvpnsetlheIlkelrkkkkipldykqlfmldmlvaeieka
                   t+ k+G+++++  s++++e+l+                            
     fh08980   687 TSTKHGFMQFI-QSVPVAEVLD---------------------------- 707  

                   qyptitlakakkkalrykhatlleklkvfegatsafkppvLydwfkekfp
                                                       ++ +++++f+++ p
     fh08980   708 ------------------------------------TEGSIQNFFRKYAP 721  

                   dpn...eiyfeardnFtrScAgySvvtYiLGlGDRHndNImldrktGhlf
                   ++n++++i  e++d++++ScAgy+v+tYiLG+GDRH+dN++l+ ktG+lf
     fh08980   722 SENgpnGISAEVMDTYVKSCAGYCVITYILGVGDRHLDNLLLT-KTGKLF 770  

                   HIDFGfilgngpklpgfklfgRErvPFrLTpemvdvmGgGgkpsgvfglF
                   HIDFG+ilg++pk++++        P++L +emv++mG  g +s+++++F
     fh08980   771 HIDFGYILGRDPKPLPP--------PMKLNKEMVEGMG--GTQSEQYQEF 810  

                   rslCerayralRknsnllmnllelMlsdglmpewrsg.ekdikylrerlr
                   r+ C++a+++lR++snl++nl++lM+++++ p++  +++k++k++++++r
     fh08980   811 RKQCYTAFLHLRRYSNLILNLFSLMVDANI-PDIALEpDKTVKKVQDKFR 859  

                   ldvlsdeeaaeyfkktektkliessleslttrlndlfhllaql<-*
                   ld lsdeea +y++      li +s+++l+ ++++++h++aq+   
     fh08980   860 LD-LSDEEAVHYMQS-----LIDESVHALFAAVVEQIHKFAQY    896  

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