# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofh09317.fasta.nr -Q fh09317.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fh09317, 188 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6824169 sequences Expectation_n fit: rho(ln(x))= 4.9563+/-0.000184; mu= 8.6578+/- 0.010 mean_var=63.8353+/-12.651, 0's: 38 Z-trim: 49 B-trim: 2016 in 1/64 Lambda= 0.160525 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62088226|dbj|BAD92560.1| hypothetical protein F ( 188) 1302 309.5 1.7e-82 gi|18027752|gb|AAL55837.1|AF318330_1 unknown [Homo ( 175) 987 236.5 1.5e-60 gi|10433998|dbj|BAB14091.1| unnamed protein produc ( 209) 987 236.5 1.7e-60 gi|194239666|ref|NP_073604.3| interferon stimulate ( 325) 987 236.7 2.4e-60 gi|74760538|sp|Q8WTP8.1|I20L1_HUMAN Interferon-sti ( 325) 987 236.7 2.4e-60 gi|75070936|sp|Q5REE2.1|I20L1_PONAB Interferon-sti ( 325) 973 233.4 2.3e-59 gi|73951436|ref|XP_545846.2| PREDICTED: similar to ( 324) 847 204.2 1.4e-50 gi|119622416|gb|EAX02011.1| interferon stimulated ( 324) 833 201.0 1.3e-49 gi|13477375|gb|AAH05164.1| ISG20L1 protein [Homo s ( 327) 830 200.3 2.1e-49 gi|194206310|ref|XP_001917567.1| PREDICTED: simila ( 323) 824 198.9 5.5e-49 gi|114658947|ref|XP_510574.2| PREDICTED: similar t ( 418) 817 197.4 2.1e-48 gi|149057237|gb|EDM08560.1| interferon stimulated ( 332) 768 186.0 4.5e-45 gi|148675137|gb|EDL07084.1| interferon stimulated ( 168) 707 171.6 4.7e-41 gi|26345364|dbj|BAC36333.1| unnamed protein produc ( 188) 707 171.7 5.1e-41 gi|26354889|dbj|BAC41071.1| unnamed protein produc ( 298) 702 170.6 1.6e-40 gi|74177900|dbj|BAE39034.1| unnamed protein produc ( 298) 702 170.6 1.6e-40 gi|148675139|gb|EDL07086.1| interferon stimulated ( 329) 702 170.7 1.8e-40 gi|81916898|sp|Q9CZI9.1|I20L1_MOUSE Interferon-sti ( 336) 702 170.7 1.8e-40 gi|26327783|dbj|BAC27632.1| unnamed protein produc ( 366) 702 170.7 1.9e-40 gi|12856989|dbj|BAB30853.1| unnamed protein produc ( 176) 698 169.6 2.1e-40 gi|126273834|ref|XP_001370628.1| PREDICTED: hypoth ( 334) 600 147.0 2.3e-33 gi|118095856|ref|XP_413869.2| PREDICTED: hypotheti ( 301) 509 125.9 4.7e-27 gi|52354607|gb|AAH82831.1| LOC494737 protein [Xeno ( 264) 464 115.5 5.8e-24 gi|111307953|gb|AAI21603.1| Hypothetical protein M ( 265) 455 113.4 2.5e-23 gi|126307849|ref|XP_001375050.1| PREDICTED: hypoth ( 237) 401 100.9 1.3e-19 gi|149751412|ref|XP_001500480.1| PREDICTED: simila ( 349) 395 99.6 4.7e-19 gi|118102084|ref|XP_001232173.1| PREDICTED: hypoth ( 293) 394 99.3 4.8e-19 gi|66911600|gb|AAH97861.1| MGC115620 protein [Xeno ( 369) 394 99.4 5.8e-19 gi|73961543|ref|XP_547530.2| PREDICTED: similar to ( 348) 392 98.9 7.6e-19 gi|55588378|ref|XP_513892.1| PREDICTED: hypothetic ( 352) 392 98.9 7.7e-19 gi|42559527|sp|Q9H9L3|I20L2_HUMAN Interferon-stimu ( 353) 392 98.9 7.7e-19 gi|169641852|gb|AAI60471.1| MGC147218 protein [Xen ( 254) 390 98.3 8.2e-19 gi|82571784|gb|AAI10187.1| Interferon stimulated e ( 349) 391 98.7 8.9e-19 gi|112419022|gb|AAI22471.1| Unknown (protein for M ( 369) 391 98.7 9.3e-19 gi|49522525|gb|AAH75592.1| MGC89596 protein [Xenop ( 366) 390 98.4 1.1e-18 gi|194035983|ref|XP_001924782.1| PREDICTED: simila ( 343) 387 97.7 1.7e-18 gi|109017388|ref|XP_001116730.1| PREDICTED: simila ( 354) 386 97.5 2e-18 gi|148683381|gb|EDL15328.1| interferon stimulated ( 295) 385 97.2 2e-18 gi|149545635|ref|XP_001505322.1| PREDICTED: hypoth ( 104) 379 95.5 2.3e-18 gi|77748300|gb|AAI06465.1| LOC733393 protein [Xeno ( 368) 385 97.3 2.4e-18 gi|26343725|dbj|BAC35519.1| unnamed protein produc ( 368) 385 97.3 2.4e-18 gi|123794041|sp|Q3U1G5.1|I20L2_MOUSE Interferon-st ( 369) 385 97.3 2.4e-18 gi|81910849|sp|Q6AXU3.1|I20L2_RAT Interferon-stimu ( 369) 369 93.6 3.2e-17 gi|62639582|ref|XP_574433.1| PREDICTED: similar to ( 368) 368 93.3 3.7e-17 gi|122891152|emb|CAM12969.1| novel protein [Danio ( 321) 358 91.0 1.7e-16 gi|126635167|emb|CAM56286.1| novel protein [Danio ( 321) 358 91.0 1.7e-16 gi|47214538|emb|CAG04558.1| unnamed protein produc ( 303) 356 90.5 2.2e-16 gi|47201243|emb|CAF88756.1| unnamed protein produc ( 99) 348 88.3 3.3e-16 gi|109511059|ref|XP_001065218.1| PREDICTED: simila ( 357) 336 85.9 6.2e-15 gi|149057238|gb|EDM08561.1| interferon stimulated ( 78) 321 82.0 2.1e-14 >>gi|62088226|dbj|BAD92560.1| hypothetical protein FLJ12 (188 aa) initn: 1302 init1: 1302 opt: 1302 Z-score: 1636.3 bits: 309.5 E(): 1.7e-82 Smith-Waterman score: 1302; 100.000% identity (100.000% similar) in 188 aa overlap (1-188:1-188) 10 20 30 40 50 60 fh0931 SPHSVLPPSTGIHASIGQGFSGRVSCQPDGVWGDLPDSSFCSQILKLLKGKVVVGHALHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SPHSVLPPSTGIHASIGQGFSGRVSCQPDGVWGDLPDSSFCSQILKLLKGKVVVGHALHN 10 20 30 40 50 60 70 80 90 100 110 120 fh0931 DFQALKYVHPRSQTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DFQALKYVHPRSQTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVE 70 80 90 100 110 120 130 140 150 160 170 180 fh0931 DATTAMELYRLVEVQWEQQEARSLWTCPEDREPDSSTDMEQYMEDQYWPDDLAHGSRGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DATTAMELYRLVEVQWEQQEARSLWTCPEDREPDSSTDMEQYMEDQYWPDDLAHGSRGGA 130 140 150 160 170 180 fh0931 REAQDRRN :::::::: gi|620 REAQDRRN >>gi|18027752|gb|AAL55837.1|AF318330_1 unknown [Homo sap (175 aa) initn: 987 init1: 987 opt: 987 Z-score: 1242.5 bits: 236.5 E(): 1.5e-60 Smith-Waterman score: 987; 99.315% identity (100.000% similar) in 146 aa overlap (43-188:30-175) 20 30 40 50 60 70 fh0931 HASIGQGFSGRVSCQPDGVWGDLPDSSFCSQILKLLKGKVVVGHALHNDFQALKYVHPRS .::::::::::::::::::::::::::::: gi|180 MPIADYRTRWSGITRQHMRKAVPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRS 10 20 30 40 50 80 90 100 110 120 130 fh0931 QTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|180 QTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLV 60 70 80 90 100 110 140 150 160 170 180 fh0931 EVQWEQQEARSLWTCPEDREPDSSTDMEQYMEDQYWPDDLAHGSRGGAREAQDRRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|180 EVQWEQQEARSLWTCPEDREPDSSTDMEQYMEDQYWPDDLAHGSRGGAREAQDRRN 120 130 140 150 160 170 >>gi|10433998|dbj|BAB14091.1| unnamed protein product [H (209 aa) initn: 987 init1: 987 opt: 987 Z-score: 1241.4 bits: 236.5 E(): 1.7e-60 Smith-Waterman score: 987; 99.315% identity (100.000% similar) in 146 aa overlap (43-188:64-209) 20 30 40 50 60 70 fh0931 HASIGQGFSGRVSCQPDGVWGDLPDSSFCSQILKLLKGKVVVGHALHNDFQALKYVHPRS .::::::::::::::::::::::::::::: gi|104 EMPIADYRTRWSGITRQHMRKAVPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRS 40 50 60 70 80 90 80 90 100 110 120 130 fh0931 QTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 QTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLV 100 110 120 130 140 150 140 150 160 170 180 fh0931 EVQWEQQEARSLWTCPEDREPDSSTDMEQYMEDQYWPDDLAHGSRGGAREAQDRRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 EVQWEQQEARSLWTCPEDREPDSSTDMEQYMEDQYWPDDLAHGSRGGAREAQDRRN 160 170 180 190 200 >>gi|194239666|ref|NP_073604.3| interferon stimulated ex (325 aa) initn: 987 init1: 987 opt: 987 Z-score: 1238.6 bits: 236.7 E(): 2.4e-60 Smith-Waterman score: 987; 99.315% identity (100.000% similar) in 146 aa overlap (43-188:180-325) 20 30 40 50 60 70 fh0931 HASIGQGFSGRVSCQPDGVWGDLPDSSFCSQILKLLKGKVVVGHALHNDFQALKYVHPRS .::::::::::::::::::::::::::::: gi|194 EMPIADYRTRWSGITRQHMRKAVPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRS 150 160 170 180 190 200 80 90 100 110 120 130 fh0931 QTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLV 210 220 230 240 250 260 140 150 160 170 180 fh0931 EVQWEQQEARSLWTCPEDREPDSSTDMEQYMEDQYWPDDLAHGSRGGAREAQDRRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 EVQWEQQEARSLWTCPEDREPDSSTDMEQYMEDQYWPDDLAHGSRGGAREAQDRRN 270 280 290 300 310 320 >>gi|74760538|sp|Q8WTP8.1|I20L1_HUMAN Interferon-stimula (325 aa) initn: 987 init1: 987 opt: 987 Z-score: 1238.6 bits: 236.7 E(): 2.4e-60 Smith-Waterman score: 987; 99.315% identity (100.000% similar) in 146 aa overlap (43-188:180-325) 20 30 40 50 60 70 fh0931 HASIGQGFSGRVSCQPDGVWGDLPDSSFCSQILKLLKGKVVVGHALHNDFQALKYVHPRS .::::::::::::::::::::::::::::: gi|747 EMPIADYRTRWSGITRQHMRKAVPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRS 150 160 170 180 190 200 80 90 100 110 120 130 fh0931 QTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 QTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLV 210 220 230 240 250 260 140 150 160 170 180 fh0931 EVQWEQQEARSLWTCPEDREPDSSTDMEQYMEDQYWPDDLAHGSRGGAREAQDRRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 EVQWEQQEARSLWTCPEDREPDSSTDMEQYMEDQYWPDDLAHGSRGGAREAQDRRN 270 280 290 300 310 320 >>gi|75070936|sp|Q5REE2.1|I20L1_PONAB Interferon-stimula (325 aa) initn: 973 init1: 973 opt: 973 Z-score: 1221.1 bits: 233.4 E(): 2.3e-59 Smith-Waterman score: 973; 97.945% identity (99.315% similar) in 146 aa overlap (43-188:180-325) 20 30 40 50 60 70 fh0931 HASIGQGFSGRVSCQPDGVWGDLPDSSFCSQILKLLKGKVVVGHALHNDFQALKYVHPRS .::::::::::::::::::::::::::::: gi|750 EMPIVDYRTRWSGITRQHMCKAIPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRS 150 160 170 180 190 200 80 90 100 110 120 130 fh0931 QTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLV :::::::::::::::.:: ::::::::::::::::::::::::::::::::::::::::: gi|750 QTRDTTYVPNFLSEPSLHIRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLV 210 220 230 240 250 260 140 150 160 170 180 fh0931 EVQWEQQEARSLWTCPEDREPDSSTDMEQYMEDQYWPDDLAHGSRGGAREAQDRRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 EVQWEQQEARSLWTCPEDREPDSSTDMEQYMEDQYWPDDLAHGSRGGAREAQDRRN 270 280 290 300 310 320 >>gi|73951436|ref|XP_545846.2| PREDICTED: similar to int (324 aa) initn: 821 init1: 821 opt: 847 Z-score: 1063.4 bits: 204.2 E(): 1.4e-50 Smith-Waterman score: 847; 88.276% identity (94.483% similar) in 145 aa overlap (43-187:180-323) 20 30 40 50 60 70 fh0931 HASIGQGFSGRVSCQPDGVWGDLPDSSFCSQILKLLKGKVVVGHALHNDFQALKYVHPRS .::::::::::::::::::::::::::::: gi|739 EMPIVDYRTRWSGVTRQHMRKAIPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRS 150 160 170 180 190 200 80 90 100 110 120 130 fh0931 QTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLV ::::::::::.: .::::::.:::::::::::::::::.::::::::::::::::::::: gi|739 QTRDTTYVPNLLHQPGLHTRTRVSLKDLALQLLHKKIQAGQHGHSSVEDATTAMELYRLV 210 220 230 240 250 260 140 150 160 170 180 fh0931 EVQWEQQEARSLWTCPEDREPDSSTDMEQYMEDQYWPDDLAHGSRGGAREAQDRRN :::::::.: :: ::::::::::::::::::::::.:::.:.:: :::::: gi|739 EVQWEQQQASSLPPRPEDREPDSSTDMEQYMEDQYWPEDLAQGTRG-ETEAQDRRE 270 280 290 300 310 320 >>gi|119622416|gb|EAX02011.1| interferon stimulated exon (324 aa) initn: 829 init1: 829 opt: 833 Z-score: 1045.9 bits: 201.0 E(): 1.3e-49 Smith-Waterman score: 833; 93.985% identity (96.992% similar) in 133 aa overlap (43-175:180-312) 20 30 40 50 60 70 fh0931 HASIGQGFSGRVSCQPDGVWGDLPDSSFCSQILKLLKGKVVVGHALHNDFQALKYVHPRS .::::::::::::::::::::::::::::: gi|119 EMPIADYRTRWSGITRQHMRKAVPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRS 150 160 170 180 190 200 80 90 100 110 120 130 fh0931 QTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLV 210 220 230 240 250 260 140 150 160 170 180 fh0931 EVQWEQQEARSLWTCPEDREPDSSTDMEQYMEDQYWPDDLAHGSRGGAREAQDRRN :::::::::::::::::::::::::::::::::: .:. . : gi|119 EVQWEQQEARSLWTCPEDREPDSSTDMEQYMEDQDFPSPPSTGLLSKSLRNKTVV 270 280 290 300 310 320 >>gi|13477375|gb|AAH05164.1| ISG20L1 protein [Homo sapie (327 aa) initn: 823 init1: 823 opt: 830 Z-score: 1042.1 bits: 200.3 E(): 2.1e-49 Smith-Waterman score: 830; 96.899% identity (97.674% similar) in 129 aa overlap (43-168:180-308) 20 30 40 50 60 70 fh0931 HASIGQGFSGRVSCQPDGVWGDLPDSSFCSQILKLLKGKVVVGHALHNDFQALKYVHPRS .::::::::::::::::::::::::::::: gi|134 EMPIADYRTRWSGITRQHMRKAVPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRS 150 160 170 180 190 200 80 90 100 110 120 130 fh0931 QTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 QTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLV 210 220 230 240 250 260 140 150 160 170 180 fh0931 EVQWEQQEARSLWTCPEDREPDSSTDMEQYMEDQ---YWPDDLAHGSRGGAREAQDRRN :::::::::::::::::::::::::::::::::: :: gi|134 EVQWEQQEARSLWTCPEDREPDSSTDMEQYMEDQSTQYWALKQKSEKQDSGLNSGAFV 270 280 290 300 310 320 >>gi|194206310|ref|XP_001917567.1| PREDICTED: similar to (323 aa) initn: 824 init1: 783 opt: 824 Z-score: 1034.7 bits: 198.9 E(): 5.5e-49 Smith-Waterman score: 824; 86.207% identity (93.793% similar) in 145 aa overlap (43-187:180-322) 20 30 40 50 60 70 fh0931 HASIGQGFSGRVSCQPDGVWGDLPDSSFCSQILKLLKGKVVVGHALHNDFQALKYVHPRS .::::::::::::::::::::::::::::: gi|194 EMPIVDYRTRWSGITRQHMRKAIPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRS 150 160 170 180 190 200 80 90 100 110 120 130 fh0931 QTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLV ::::::::::.:..::::::.:::::::::::::::::::::::::::::.::::::.:: gi|194 QTRDTTYVPNLLNQPGLHTRTRVSLKDLALQLLHKKIQVGQHGHSSVEDAVTAMELYQLV 210 220 230 240 250 260 140 150 160 170 180 fh0931 EVQWEQQEARSLWTCPEDREPDSSTDMEQYMEDQYWPDDLAHGSRGGAREAQDRRN .:::::::: : : ::::::::::: ::::::::::.::: . ::. :::::: gi|194 RVQWEQQEASRLRTHPEDREPDSSTDTEQYMEDQYWPEDLA--TSGGSGEAQDRRE 270 280 290 300 310 320 188 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sat Aug 9 13:50:25 2008 done: Sat Aug 9 13:53:20 2008 Total Scan time: 620.770 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]