hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-13532162/chunk_1/iprscan-20080809-13532162.nocrc
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Query sequence: fh09317
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
PF00929.14.fs Exonuclease                                   35.7    1.3e-10   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
PF00929.14.fs   1/1      43   129 ..    84   187 .]    35.7  1.3e-10

Alignments of top-scoring domains:
PF00929.14.fs: domain 1 of 1, from 43 to 129: score 35.7, E = 1.3e-10
                   *->efleflkklsilvahnnkkasfdvgfllyddlrflklphpfsnikin
                      ++l++lk +++ v+h            l++d+++lk+ hp+s     
     fh09317    43    QILKLLK-GKVVVGHA-----------LHNDFQALKYVHPRS---QT 74   

                   dvidtlilakkafkgfkrgraktsLdaLaeklglefiqren.iaHrAldD
                      +++ ++ +  + + r r   sL++La +l++++iq  ++ +H++++D
     fh09317    75 RDTTYVPNFLSEPGLHTRAR--VSLKDLALQLLHKKIQV-GqHGHSSVED 121  

                   Arataelf<-*
                   A +++el+   
     fh09317   122 ATTAMELY    129  

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