hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-13594815/chunk_1/iprscan-20080809-13594815.nocrc
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Query sequence: fh09362
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00063                                                 201.1      1e-55   1
SM00631                                                  35.7    2.8e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00063    1/1      14   134 ..     1   130 []   201.1    1e-55
SM00631    1/1     159   394 ..     1   324 []    35.7  2.8e-08

Alignments of top-scoring domains:
SM00063: domain 1 of 1, from 14 to 134: score 201.1, E = 1e-55
                   *->rClpePitiplCkdlgLPYNlTsmPNLlgHttQe..EAgleYI.leq
                      +C  +++++++C+d +  YN+T++PNLl+H+++e  EA++eYI l+ 
     fh09362    14    TC--VDLQLRTCSDAA--YNHTTFPNLLQHRSWEvvEASSEYIlLSV 56   

                   FkPLlnvqkCspdlrfFLCsvYaPvCtedlpdepipPCRslCEavregCe
                    ++Ll+ q C+pdlr++ C+v+aP+C+ ++   +++PCR++CE +re C+
     fh09362    57 LHQLLEGQ-CNPDLRLLGCAVLAPRCEGGW---VRRPCRHICEGLREVCQ 102  

                   plmekfGfaWPefLrCtedrFPvqndreelCmepnp<-*
                   p ++++++aWP+fL+C  +r+++++d  e+C++p +   
     fh09362   103 PAFDAIDMAWPYFLDC--HRYFTRED--EGCYDPLE    134  

SM00631: domain 1 of 1, from 159 to 394: score 35.7, E = 2.8e-08
                   *->YhsyeeinawlddLarnyPdltsVslisiGksyeGRpikvlki....
                      +hsy  ++  l+++a++  +   ++ +siG+s+ GR+++v+++++++
     fh09362   159    HHSYAQMVRVLRRTASRCAHV--ARTYSIGRSFDGRELLVIEFssrp 203  

                   ......kpavfidagiHAREWiapatalylinqLltneteYskdpddegs
                   + ++  +p+v++ ++iH++E+ +++++ yl+++L+++  +   +p+    
     fh09362   204 gqhelmEPEVKLIGNIHGNEVAGREMLIYLAQYLCSE--YLLGNPR---- 247  

                   vtklLdkldwyivPvmNPDGYeythtstdRlWRKnRspngasgsqgtwyn
                   +++lL+ ++++++P+mNPDGYe           ++   ng +++   + n
     fh09362   248 IQRLLNTTRIHLLPSMNPDGYEV--A-----AAEGAGYNGWTSG---RQN 287  

                   CyGvDlNRNfdfhnWgeigGssslpCsetYaGsspfSeWEpEtkalldfi
                   +   DlNRNf++        +s                 E+ + a     
     fh09362   288 AQNLDLNRNFPDL-------TS-----------------EYYRLAETRGA 313  

                   lsneigkgrikayislHsysqlllyPyGytnatvppngedlhkevaka..
                   +s           i  H++       +G     v+p+ +  + + +++ +
     fh09362   314 RSD-------HIPIPQHYW-------WG----KVAPETKAIM-KWMQTip 344  

                   aakaigdyyfgGtlYtpGsssadpdlditlYpasGgsdDwaygtlkgvky
                    +   ++++  G ++++                     D+ ++ +  +++
     fh09362   345 FVL-SASLH--GGDLVVS-----------------YPFDFSKHPQEEKMF 374  

                   sytiELrdtgddagrygFlLppscvkpvrmeqiiptgeE<-*
                   s t   +d +++        pp        +q +p+      
     fh09362   375 SPT---PDEKRE--------PP--------PQHRPVLLG    394  

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