hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-14061241/chunk_1/iprscan-20080809-14061241.nocrc
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Query sequence: fh09382
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01369.11.ls Sec7 domain                                    299.8    4.7e-87   1
PF01369.11.fs Sec7 domain                                    297.9    1.8e-86   1
PF09324.1.ls Domain of unknown function (DUF1981)           191.7    1.6e-54   1
PF09324.1.fs Domain of unknown function (DUF1981)           189.8    6.3e-54   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01369.11.fs   1/1     173   360 ..     1   221 []   297.9  1.8e-86
PF01369.11.ls   1/1     173   360 ..     1   221 []   299.8  4.7e-87
PF09324.1.fs   1/1     697   782 ..     1    88 []   189.8  6.3e-54
PF09324.1.ls   1/1     697   782 ..     1    88 []   191.7  1.6e-54

Alignments of top-scoring domains:
PF01369.11.fs: domain 1 of 1, from 173 to 360: score 297.9, E = 1.8e-86
                   *->lksrkkqliegrkkFNqkPkkGiedLiskglladdkdpqdiAkfLle
                      lk++k +  +g++ FN kPk Gi+ L++ g l    +p+diA+fL  
     fh09382   173    LKQQKEIIEQGIDLFNKKPKRGIQYLQEQGMLG--TTPEDIAQFLH- 216  

                   eteGLdKkaiGefLGenddfniqvLneFvkNlFdFtglpLdeALRlfLks
                     e+Ld + +GefLG+nd fn++v+ ++v+  +dF+g  ++ ALR fL+ 
     fh09382   217 QEERLDSTQVGEFLGDNDKFNKEVMYAYVD-QHDFSGKDFVSALRMFLEG 265  

                   FRLPGEaQkIdRileaFSerYiqcQyNpgv..fsnkkaEDdIecvqpdaD
                   FRLPGEaQkIdR++e+F+ rY +c  N+g + f+++             D
     fh09382   266 FRLPGEAQKIDRLMEKFAARYLEC--NQGQtlFASA-------------D 300  

                   sayvLsYSlIMLNTDLHNNpqVKkKkikMTledFieNnrrdLREENEYEE
                   +ayvL+YS+IML TDLH +pqVK+K   MT+e +i++nr           
     fh09382   301 TAYVLAYSIIMLTTDLH-SPQVKNK---MTKEQYIKMNR----------- 335  

                   LgindGgDlprefLtelYesIkneei<-*
                    gind +Dlp+e+L+++Y++I+ ++i   
     fh09382   336 -GINDSKDLPEEYLSAIYNEIAGKKI    360  

PF01369.11.ls: domain 1 of 1, from 173 to 360: score 299.8, E = 4.7e-87
                   *->lksrkkqliegrkkFNqkPkkGiedLiskglladdkdpqdiAkfLle
                      lk++k +  +g++ FN kPk Gi+ L++ g l    +p+diA+fL  
     fh09382   173    LKQQKEIIEQGIDLFNKKPKRGIQYLQEQGMLG--TTPEDIAQFLH- 216  

                   eteGLdKkaiGefLGenddfniqvLneFvkNlFdFtglpLdeALRlfLks
                     e+Ld + +GefLG+nd fn++v+ ++v+  +dF+g  ++ ALR fL+ 
     fh09382   217 QEERLDSTQVGEFLGDNDKFNKEVMYAYVD-QHDFSGKDFVSALRMFLEG 265  

                   FRLPGEaQkIdRileaFSerYiqcQyNpgv..fsnkkaEDdIecvqpdaD
                   FRLPGEaQkIdR++e+F+ rY +c  N+g + f+++             D
     fh09382   266 FRLPGEAQKIDRLMEKFAARYLEC--NQGQtlFASA-------------D 300  

                   sayvLsYSlIMLNTDLHNNpqVKkKkikMTledFieNnrrdLREENEYEE
                   +ayvL+YS+IML TDLH +pqVK+K   MT+e +i++nr           
     fh09382   301 TAYVLAYSIIMLTTDLH-SPQVKNK---MTKEQYIKMNR----------- 335  

                   LgindGgDlprefLtelYesIkneei<-*
                    gind +Dlp+e+L+++Y++I+ ++i   
     fh09382   336 -GINDSKDLPEEYLSAIYNEIAGKKI    360  

PF09324.1.fs: domain 1 of 1, from 697 to 782: score 189.8, E = 6.3e-54
                   *->mkFLekeELanfkFQkdFLkPFEyImqnsnnqsvevkElvLrClsQm
                      mkFLek+ELanf+FQkdFL+PFE+Im  ++n+s++++++v+rC++Qm
     fh09382   697    MKFLEKGELANFRFQKDFLRPFEHIM--KRNRSPTIRDMVVRCIAQM 741  

                   ilskadnIkSGWktiFgvltlAakdesesivklAfqiidqi<-*
                   ++s+a nI+SGWk+iF+v++lAa+d++esiv+lAfq++ +i   
     fh09382   742 VNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHI    782  

PF09324.1.ls: domain 1 of 1, from 697 to 782: score 191.7, E = 1.6e-54
                   *->mkFLekeELanfkFQkdFLkPFEyImqnsnnqsvevkElvLrClsQm
                      mkFLek+ELanf+FQkdFL+PFE+Im  ++n+s++++++v+rC++Qm
     fh09382   697    MKFLEKGELANFRFQKDFLRPFEHIM--KRNRSPTIRDMVVRCIAQM 741  

                   ilskadnIkSGWktiFgvltlAakdesesivklAfqiidqi<-*
                   ++s+a nI+SGWk+iF+v++lAa+d++esiv+lAfq++ +i   
     fh09382   742 VNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHI    782  

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