hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-14061241/chunk_1/iprscan-20080809-14061241.nocrc
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Query sequence: fh09382
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00222                                                 369.5   2.1e-106   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00222    1/1     173   360 ..     1   226 []   369.5 2.1e-106

Alignments of top-scoring domains:
SM00222: domain 1 of 1, from 173 to 360: score 369.5, E = 2.1e-106
                   *->sknrkkllsegikkfnqkPkkGiqfLqekgflakevDdspqevAkfl
                      +k++k ++++gi++fn+kPk+Giq+Lqe+g+l+    ++p+++A+fl
     fh09382   173    LKQQKEIIEQGIDLFNKKPKRGIQYLQEQGMLG----TTPEDIAQFL 215  

                   ydseSadadeseteglnkkaiGdyLgeshdefnrlvLhafvdlfdFsgkd
                   +          ++e+l+++++G++Lg+ +d fn++v++a+vd++dFsgkd
     fh09382   216 H----------QEERLDSTQVGEFLGD-NDKFNKEVMYAYVDQHDFSGKD 254  

                   ldeALRefLesfrLPGEaQkIDRlleaFserYcecNpgvfskagkslski
                   ++ ALR+fLe frLPGEaQkIDRl+e+F++rY+ecN+g++ +a       
     fh09382   255 FVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFA------- 297  

                   qqllnaDaaYvLaYSlIMLNTDLHnpnvkkskakdiLvKMtkedFikNlr
                       +aD+aYvLaYS+IML+TDLH+p+vk+        KMtke++ik++r
     fh09382   298 ----SADTAYVLAYSIIMLTTDLHSPQVKN--------KMTKEQYIKMNR 335  

                   ginkeiddgedlprefLeelYdsIknnei<-*
                   gin    d++dlp+e+L+++Y++I+ ++i   
     fh09382   336 GIN----DSKDLPEEYLSAIYNEIAGKKI    360  

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