hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090525/iprscan-20090525-14194685/chunk_1/iprscan-20090525-14194685.nocrc
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Query sequence: fh09886
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00855.8.fs PWWP domain                                    110.1    3.3e-32   1
PF00855.8.ls PWWP domain                                    112.0    1.6e-30   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00855.8.fs   1/1       9    81 ..     1    86 []   110.1  3.3e-32
PF00855.8.ls   1/1       9    81 ..     1    86 []   112.0  1.6e-30

Alignments of top-scoring domains:
PF00855.8.fs: domain 1 of 1, from 9 to 81: score 110.1, E = 3.3e-32
                   *->dfkpGDLVwAKmkGFpwWPArvvsqketptsvrkkLKRntnsrksnr
                      ++k GDLV+AKmkG+p+WPAr+++ +e ++++           + n+
     fh09886     9    EYKAGDLVFAKMKGYPHWPARIDELPEGAVKP-----------PANK 44   

                   vkVqFFgdhkyrawvskkrlkPlLdsdiekfhkdekrKg<-*
                   ++++FFg+h++ a++++k+l+P+  + ++kf+k++krKg   
     fh09886    45 YPIFFFGTHET-AFLGPKDLFPY-KEYKDKFGKSNKRKG    81   

PF00855.8.ls: domain 1 of 1, from 9 to 81: score 112.0, E = 1.6e-30
                   *->dfkpGDLVwAKmkGFpwWPArvvsqketptsvrkkLKRntnsrksnr
                      ++k GDLV+AKmkG+p+WPAr+++ +e ++++           + n+
     fh09886     9    EYKAGDLVFAKMKGYPHWPARIDELPEGAVKP-----------PANK 44   

                   vkVqFFgdhkyrawvskkrlkPlLdsdiekfhkdekrKg<-*
                   ++++FFg+h++ a++++k+l+P+  + ++kf+k++krKg   
     fh09886    45 YPIFFFGTHET-AFLGPKDLFPY-KEYKDKFGKSNKRKG    81   

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