hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090525/iprscan-20090525-14194685/chunk_1/iprscan-20090525-14194685.nocrc
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Query sequence: fh09886
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00293                                                  79.4    4.3e-19   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00293    1/1      10    67 ..     1    84 []    79.4  4.3e-19

Alignments of top-scoring domains:
SM00293: domain 1 of 1, from 10 to 67: score 79.4, E = 4.3e-19
                   *->fkpGDlVwAKmkGFPwWPAlvvspketpsnirktgvviphpplevlk
                      +k GDlV+AKmkG+P+WPA++ + +e +                   
     fh09886    10    YKAGDLVFAKMKGYPHWPARIDELPE-G------------------- 36   

                   leeeaknkrkenlypVlFFgdkdtrawvsssklfPLt<-*
                        + k  +n+yp +FFg+++t a++++++lfP+    
     fh09886    37 -----AVKPPANKYPIFFFGTHET-AFLGPKDLFPYK    67   

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