hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-08214816/chunk_1/iprscan-20090618-08214816.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: fh11504
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00678                                                 132.2    5.6e-35   1
SM00184                                                  37.1    2.3e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00184    1/1      48    85 ..     1    23 []    37.1  2.3e-06
SM00678    1/1     112   187 ..     1    84 []   132.2  5.6e-35

Alignments of top-scoring domains:
SM00184: domain 1 of 1, from 48 to 85: score 37.1, E = 2.3e-06
                   *->CpICle....pvvlpCgH.FCr.Ci.........CPlC<-*
                      C+ICl++  +pv lpC H FC+ C+++ ++ +++C lC   
     fh11504    48    CAICLQtcvhPVSLPCKHvFCYlCVkgaswlgkrCALC    85   

SM00678: domain 1 of 1, from 112 to 187: score 132.2, E = 5.6e-35
                   *->gkkvvWeyesrshggWwpYdprvskhIEdafargkktcelsilGqvD
                      ++++ W+ye+r  +gWw+Yd+r+s+++Edaf +gkk++e++i+G   
     fh11504   112    NGEYAWYYEGR--NGWWQYDERTSRELEDAFSKGKKNTEMLIAG--- 153  

                   sLrpYiiDfesmtQyrqdtgnrTtRkVrRvladpysa<-*
                     + Y+ D+e+m+Qyr+++++r +Rk++R++ d++++   
     fh11504   154 --FLYVADLENMVQYRRNEHGR-RRKIKRDIIDIPKK    187  

//