hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-14524553/chunk_1/iprscan-20080809-14524553.nocrc
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Query sequence: fh11574
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00112                                                 550.7   5.9e-161   7

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00112    1/7      59   150 ..     1   121 []    23.7    0.011
SM00112    2/7     174   260 ..     1   121 []    84.4  1.3e-20
SM00112    3/7     284   366 ..     1   121 []    99.8  3.2e-25
SM00112    4/7     396   477 ..     1   121 []    80.0    3e-19
SM00112    5/7     501   580 ..     1   121 []   112.5  4.8e-29
SM00112    6/7     604   683 ..     1   121 []   110.1  2.5e-28
SM00112    7/7     710   792 ..     1   121 []    40.2  2.8e-07

Alignments of top-scoring domains:
SM00112: domain 1 of 7, from 59 to 150: score 23.7, E = 0.011
                   *->vsAtDaDsgsngeNgkpgdaevvtYsils......lFsIdpetGtng
                      +s + a +g   +++       ++Y+++s+ ++ +l ++ ++tG   
     fh11574    59    ISHINAATG---TSAS------LVYRLVSkagdapLVKVSSSTG--- 93   

                   psLvkleiiittt.kpLDREeqflkreqtdeseYtLtveAtDgGgpppgd
                           +i+tt+ ++DRE+ +   + + e e  ++ e++   +     
     fh11574    94 --------EIFTTsNRIDREKLCAGASYAEENECFFELEVVILPND---- 131  

                   ssptrksqqtpplsstatvtvtVlDvNDNaP<-*
                               +     + ++V+D NDNaP   
     fh11574   132 ------------FFRLIKIKIIVKDTNDNAP    150  

SM00112: domain 2 of 7, from 174 to 260: score 84.4, E = 1.3e-20
                   *->vsAtDaDsgsngeNgkpgdaevvtYsils......lFsIdpetGtng
                       sAtD+D+g    Ng        +Y++l++++  +l  +++  G++ 
     fh11574   174    PSATDPDTG---FNGV------QHYELLNgqsvfgLDIVETPEGEKW 211  

                   psLvkleiiitttkpLDREeqflkreqtdeseYtLtveAtDgGgpppgds
                   p       ++++++ LDRE++         ++Y +++++ DgG+p+    
     fh11574   212 P-------QLIVQQNLDREQK---------DTYVMKIKVEDGGTPQ---- 241  

                   sptrksqqtpplsstatvtvtVlDvNDNaP<-*
                              +ssta ++vtV DvNDN+P   
     fh11574   242 -----------KSSTAILQVTVSDVNDNRP    260  

SM00112: domain 3 of 7, from 284 to 366: score 99.8, E = 3.2e-25
                   *->vsAtDaDsgsngeNgkpgdaevvtYsils........lFsIdpetGt
                      ++AtDaD g   +N++      ++Y +  +  + +++lF+++ +tG 
     fh11574   284    LHATDADIG---SNAE------IRYIFGAqvapatkrLFALNNTTG- 320  

                   ngpsLvkleiiitttkpLDREeqflkreqtdeseYtLtveAtDgGgpppg
                              it++++LDREe+         + + +tv A+Dg +    
     fh11574   321 ----------LITVQRSLDREET---------AIHKVTVLASDGSS---- 347  

                   dssptrksqqtpplsstatvtvtVlDvNDNaP<-*
                                  + atvt++V+DvNDN+P   
     fh11574   348 -------------TPARATVTINVTDVNDNPP    366  

SM00112: domain 4 of 7, from 396 to 477: score 80.0, E = 3e-19
                   *->vsAtDaDsgsngeNgkpgdaevvtYsils..lFsIdpetGtngpsLv
                      ++++D+D++    Ngk      v + i+++ +F++ +   +      
     fh11574   396    ITVSDKDTD---VNGK------VICFIERevPFHLKAVYDN------ 427  

                   kleiiitttkpLDREeqflkreqtdeseYtLtveAtDgGgpppgdssptr
                      + + t+  LD+E +         +e++++++A+D+G p+        
     fh11574   428 --QYLLETSSLLDYEGT---------KEFSFKIVASDSGKPS-------- 458  

                   ksqqtpplsstatvtvtVlDvNDNaP<-*
                          l  ta v+v+++D+NDN+P   
     fh11574   459 -------LNQTALVRVKLEDENDNPP    477  

SM00112: domain 5 of 7, from 501 to 580: score 112.5, E = 4.8e-29
                   *->vsAtDaDsgsngeNgkpgdaevvtYsils...lFsIdpetGtngpsL
                      +sAtD+Dsg    N++      ++Y++ ++ ++F++d++tG      
     fh11574   501    ISATDEDSG---KNAD------IVYQLGPnasFFDLDRKTG------ 532  

                   vkleiiitttkpLDREeqflkreqtdeseYtLtveAtDgGgpppgdsspt
                        ++t+++ +DREeq         +++ +tv+A+D+G+pp       
     fh11574   533 -----VLTASRVFDREEQ---------ERFIFTVTARDNGTPP------- 561  

                   rksqqtpplsstatvtvtVlDvNDNaP<-*
                           l+s+a v+vtVlD+NDN P   
     fh11574   562 --------LQSQAAVIVTVLDENDNSP    580  

SM00112: domain 6 of 7, from 604 to 683: score 110.1, E = 2.5e-28
                   *->vsAtDaDsgsngeNgkpgdaevvtYsils...lFsIdpetGtngpsL
                      +++tDaD+g   eN        vt sil++++ F +dp +G      
     fh11574   604    ITVTDADAG---ENKA------VTLSILNdndNFVLDPYSG------ 635  

                   vkleiiitttkpLDREeqflkreqtdeseYtLtveAtDgGgpppgdsspt
                        +i+++ ++DRE+q         s+Yt+ v+AtDgG+pp       
     fh11574   636 -----VIKSNVSFDREQQ---------SSYTFDVKATDGGQPP------- 664  

                   rksqqtpplsstatvtvtVlDvNDNaP<-*
                           +ssta vt++V DvNDN P   
     fh11574   665 --------RSSTAKVTINVMDVNDNSP    683  

SM00112: domain 7 of 7, from 710 to 792: score 40.2, E = 2.8e-07
                   *->vsAtDaDsgsngeNgkpgdaevvtYsils.....lFsIdpetGtngp
                      v A+D D+g    N++      ++Y+i+s+++++lF+Idp tG+   
     fh11574   710    VFAVDVDTG---MNAE------LKYTIVSgnnkgLFRIDPVTGN--- 744  

                   sLvkleiiitttkpLDREeqflkreqtdeseYtLtveAtDgGgpppgdss
                           it+ +     +            ++L+v  +D G p      
     fh11574   745 --------ITLEEKPAPTDV---------GLHRLVVNISDLGYPK----- 772  

                   ptrksqqtpplsstatvtvtVlDvNDNaP<-*
                            +l + + v   V D   Na    
     fh11574   773 ---------SLHTLVLVFLYVNDTAGNAS    792  

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