hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-15061008/chunk_1/iprscan-20080809-15061008.nocrc
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Query sequence: fh11777
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00323                                                 531.3     4e-155   1
SM00516                                                  54.2    1.7e-11   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00323    1/1     237   586 ..     1   390 []   531.3   4e-155
SM00516    1/1     612   764 ..     1   184 []    54.2  1.7e-11

Alignments of top-scoring domains:
SM00323: domain 1 of 1, from 237 to 586: score 531.3, E = 4e-155
                   *->lkqgelgslrlktvyttdfilpseaYeeLleLllesvdvepltasla
                      l+qg++++++ +tv+++ f       e L+eL+++++d  ++++++a
     fh11777   237    LQQGTEFDTLAETVLADRF-------ERLVELVTMMGD--QGELPIA 274  

                   saleevcsvldkdelAtkLvrlFlrrgrgkpfLraLidkEvertddpvnt
                   +al++v++ +++delA++Lv+lF++r++++++L+++++kEve +d + +t
     fh11777   275 MALANVVPCSQWDELARVLVTLFDSRHLLYQLLWNMFSKEVELADSM-QT 323  

                   lFRgNsLatKsmevymklvGnqYLhttLkpvLkkiveekk..e.scEvDP
                   lFRgNsLa+K+m +++k++G+ YL+++L+p+L+ ++++++ ++ s+EvDP
     fh11777   324 LFRGNSLASKIMTFCFKVYGATYLQKLLDPLLRIVITSSDwqHvSFEVDP 373  

                   sKlevndviSfgdpvegedletnlenLlqyverlfdaIinSsdrlPygLR
                   ++le           ++e+le+n++nLlq +e++f aIi+Ss+++P++LR
     fh11777   374 TRLE-----------PSESLEENQRNLLQMTEKFFHAIISSSSEFPPQLR 412  

                   dickqLrqaaekrFpsatqdvrykaVssFvFLRFfcPAIlSPklFnLvde
                   ++c++L+q++++rFp++    +++aV+s +FLRF++PAI+SP++ +++d+
     fh11777   413 SVCHCLYQVVSQRFPQN----SIGAVGSAMFLRFINPAIVSPYEAGILDK 458  

                   hpdpttrRtLtLiAKvlQnLANlsesksklfgsKEpwmeplfkndflkqh
                   +p+p+ +R+L L++K+lQ++AN++       + KE++m p+  ndf+k++
     fh11777   459 KPPPRIERGLKLMSKILQSIANHVL------FTKEEHMRPF--NDFVKSN 500  

                   kdrvkdFLdelssvdepsesLvdkveelptkskPVstisgrelsllHsll
                   +d+ ++F+++++s++ +s    d v++++      s+is++++++lH+ll
     fh11777   501 FDAARRFFLDIASDCPTS----DAVNHSL------SFISDGNVLALHRLL 540  

                   lengdalkrkknnnrDHKAlgedpldkllfklryfrltthkltngk<-*
                   ++n++++++++++nrDHKA+g++p+dk++++l+y+++++hk++ ++   
     fh11777   541 WNNQEKIGQYLSSNRDHKAVGRRPFDKMATLLAYLGPPEHKPVADT    586  

SM00516: domain 1 of 1, from 612 to 764: score 54.2, E = 1.7e-11
                   *->elevgkayipggrigtregyDkdGrpVlieragrfdpkgllksvtle
                      e++++k   + +++    g++k G+p+++++a+rf+       +++ 
     fh11777   612    EFKALKTLSIFYQA----GTSKAGNPIFYYVARRFK-----TGQING 649  

                   ellrylvyvlEkalqelpaklekktggiegftvifDlkglsmsnfwspdl
                   +ll y+v ++ k           k++ i     ++Dl+  + sn  ++ +
     fh11777   650 DLLIYHVLLTLKPYYA-------KPYEI-----VVDLTHTGPSN--RFKT 685  

                   sllrkilkilqdhYPErLgkvliiNpPwvmaffrvlwkiikpFldektre
                   ++l k++ +++    +++ +v+i+N+ +    +   ++  +  l  +++ 
     fh11777   686 DFLSKWFVVFPGFAYDNVSAVYIYNCNS----WVREYTKYHERLLTGLKG 731  

                   KivfvgpnkVsdsdwkeeLlkyid..peqLPeelGGtlk<-*
                     ++v+       d+ ++L+++i++++++LP       +   
     fh11777   732 SKRLVFI------DCPGKLAEHIEheQQKLPAATLALEE    764  

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