hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090526/iprscan-20090526-15453384/chunk_1/iprscan-20090526-15453384.nocrc
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Query sequence: fh12350
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                 207.8      1e-57   9
SM00349                                                 105.0    8.3e-27   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00349      1/1       3    62 ..     1    62 []   105.0  8.3e-27
SM00355      1/9     171   193 ..     1    23 []    22.7     0.05
SM00355      2/9     199   221 ..     1    23 []    30.3  0.00026
SM00355      3/9     227   249 ..     1    23 []    23.3    0.034
SM00355      4/9     255   277 ..     1    23 []    24.8    0.012
SM00355      5/9     283   305 ..     1    23 []    24.8    0.012
SM00355      6/9     339   361 ..     1    23 []    28.8  0.00075
SM00355      7/9     367   389 ..     1    23 []    25.3   0.0084
SM00355      8/9     395   417 ..     1    23 []    25.7   0.0065
SM00355      9/9     423   445 ..     1    23 []     2.0  1.9e+02

Alignments of top-scoring domains:
SM00349: domain 1 of 1, from 3 to 62: score 105.0, E = 8.3e-27
                   *->VtFeDVAVdFsqEEWeqLDpaQrnLYRdVMlENYsnLvSLGgfqvsk
                      VtF+DVAV F++EE ++LD aQr LYRdVMlEN++nL S+G+++++ 
     fh12350     3    VTFKDVAVVFTEEELGLLDLAQRKLYRDVMLENFRNLLSVGHQPFH- 48   

                   pdliskLEqgeEpwi<-*
                    ++ +   ++e+ w+   
     fh12350    49 -RDTFHFLREEKFWM    62   

SM00355: domain 1 of 9, from 171 to 193: score 22.7, E = 0.05
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      + C++ Cgksf+  +aL  H+rvH   
     fh12350   171    HSCDE-CGKSFCYIsALHIHQRVH    193  

SM00355: domain 2 of 9, from 199 to 221: score 30.3, E = 0.00026
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      +kC++ Cgk fs+  +L+ H+rvH   
     fh12350   199    FKCDV-CGKEFSQSlHLQTHQRVH    221  

SM00355: domain 3 of 9, from 227 to 249: score 23.3, E = 0.034
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      +kC++ Cg+ f+ ++aL+ H + H   
     fh12350   227    FKCEQ-CGRGFRCRsALTVHCKLH    249  

SM00355: domain 4 of 9, from 255 to 277: score 24.8, E = 0.012
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C+  Cg+ f +  +L++H+r+H   
     fh12350   255    YNCEA-CGRAFIHDfQLQKHQRIH    277  

SM00355: domain 5 of 9, from 283 to 305: score 24.8, E = 0.012
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      +kC+i C+ sf+ +++L+rH  vH   
     fh12350   283    FKCEI-CSVSFRLRsSLNRHCVVH    305  

SM00355: domain 6 of 9, from 339 to 361: score 28.8, E = 0.00075
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C++ Cgksf++ + L  H+rvH   
     fh12350   339    YNCKE-CGKSFRRSsYLLIHQRVH    361  

SM00355: domain 7 of 9, from 367 to 389: score 25.3, E = 0.0084
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC++ Cgks+ +k+ L  H r H   
     fh12350   367    YKCDK-CGKSYITKsGLDLHHRAH    389  

SM00355: domain 8 of 9, from 395 to 417: score 25.7, E = 0.0065
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C+  Cgksf+++++  +H r H   
     fh12350   395    YNCDD-CGKSFRQAsSILNHKRLH    417  

SM00355: domain 9 of 9, from 423 to 445: score 2.0, E = 1.9e+02
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      +kC+  Cgk+   ++  k  ++ H   
     fh12350   423    FKCED-CGKKLVYRsYRKDQQKNH    445  

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