hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-15580443/chunk_1/iprscan-20080809-15580443.nocrc
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Query sequence: fh12484
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02985.12.fs HEAT repeat                                     25.6    3.3e-06   3
PF02985.12.ls HEAT repeat                                     30.4    5.8e-06   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02985.12.ls   2/3     120   155 ..     1    36 []    17.4    0.048

Alignments of top-scoring domains:
PF02985.12.ls: domain 2 of 3, from 120 to 155: score 17.4, E = 0.048
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      e +l +l+  l  ll+D++ +V + A+ ++++l++v+   
     fh12484   120    ElLL-KLIANLNMLLRDENVNVVKKAILTMTQLYKVA    155  

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