hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-16242349/chunk_1/iprscan-20080809-16242349.nocrc
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Query sequence: fh12690
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02824.11.ls TGS domain                                     136.5    6.8e-38   1
PF02824.11.fs TGS domain                                     134.5    2.7e-37   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02824.11.fs   1/1     185   258 ..     1    74 []   134.5  2.7e-37
PF02824.11.ls   1/1     185   258 ..     1    74 []   136.5  6.8e-38

Alignments of top-scoring domains:
PF02824.11.fs: domain 1 of 1, from 185 to 258: score 134.5, E = 2.7e-37
                   *->irvytKPdGkvpdf.dPlILpkGsTTpeDfAyaIHtdlgkkfigAkV
                        +ytK++G+ pdf+d++IL+kG++ +e+++++IH++l+ +f++A+V
     fh12690   185    TCIYTKKRGQRPDFtDAIILRKGAS-VEHVCHRIHRSLASQFKYALV 230  

                   nGkSvKhspqrvgLdhvLedgDvVeIvt<-*
                   +G+S+K+spqrvgL+h++e++Dv++Iv+   
     fh12690   231 WGTSTKYSPQRVGLTHTMEHEDVIQIVK    258  

PF02824.11.ls: domain 1 of 1, from 185 to 258: score 136.5, E = 6.8e-38
                   *->irvytKPdGkvpdf.dPlILpkGsTTpeDfAyaIHtdlgkkfigAkV
                        +ytK++G+ pdf+d++IL+kG++ +e+++++IH++l+ +f++A+V
     fh12690   185    TCIYTKKRGQRPDFtDAIILRKGAS-VEHVCHRIHRSLASQFKYALV 230  

                   nGkSvKhspqrvgLdhvLedgDvVeIvt<-*
                   +G+S+K+spqrvgL+h++e++Dv++Iv+   
     fh12690   231 WGTSTKYSPQRVGLTHTMEHEDVIQIVK    258  

//