hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-16370354/chunk_1/iprscan-20080809-16370354.nocrc
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Query sequence: fh12815
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00177                                                 105.5    6.2e-27   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00177     1/1       3   175 ..     1   181 []   105.5  6.2e-27

Alignments of top-scoring domains:
SM00177: domain 1 of 1, from 3 to 175: score 105.5, E = 6.2e-27
                   *->mGliaakllsklFGnKEmRiLmvGLDaAGKttiLYKLKLGevvttiP
                      mG+i+ kl++ l G+K mRiL++ LD+AGKttiLYKLKLGe v  +P
     fh12815     3    MGNIFEKLFKSLLGKKKMRILILSLDTAGKTTILYKLKLGETVPAVP 49   

                   tiGFnvEtveYKnisFtvWDvGGqDkiRpLWRHYyrntqGliFvvDsnDR
                   t+GF vEtveYKn  F+vWDvG   kiRpLW H+++nt+G          
     fh12815    50 TVGFCVETVEYKNNTFAVWDVGSHFKIRPLWQHFFQNTKGAR---SPGST 96   

                   eRidEAReelqRilnedElRdAvlLvFAnKqDLPdAmkaaEiteKLGLhs
                   +    A  +l       E+   ++        LP   + a    +L    
     fh12815    97 HQGSLASGVLPIKCSHVEF--GMWKGGRSHPFLPHSSRCAGSGGQLDSIL 144  

                   iRdRnWyiqatCAtsGdGLYEGLeWLsnnlknqk<-*
                     + + +    C     G      +L++ +  ++   
     fh12815   145 PHQSPAWGPWGCKDLSSGFP---SFLTSSILWKS    175  

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