# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofh13102.fasta.nr -Q fh13102.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fh13102, 515 aa vs /cdna2/lib/nr/nr library 3071326396 residues in 8985982 sequences statistics sampled from 60000 to 8979759 sequences Expectation_n fit: rho(ln(x))= 4.7635+/-0.000183; mu= 14.1219+/- 0.010 mean_var=72.0758+/-14.026, 0's: 23 Z-trim: 47 B-trim: 65 in 1/64 Lambda= 0.151070 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8985982) gi|1352085|sp|P48547.1|KCNC1_HUMAN RecName: Full=P ( 511) 3508 773.8 0 gi|116438|sp|P15388.1|KCNC1_MOUSE RecName: Full=Po ( 511) 3507 773.6 0 gi|76825377|gb|AAI07130.1| Potassium voltage-gated ( 511) 3502 772.5 0 gi|109107147|ref|XP_001087790.1| PREDICTED: simila ( 511) 3501 772.3 0 gi|60547266|gb|AAX23601.1| voltage-gated potassium ( 511) 3491 770.1 0 gi|114636411|ref|XP_001172695.1| PREDICTED: simila ( 566) 3444 759.9 0 gi|119588831|gb|EAW68425.1| potassium voltage-gate ( 585) 3444 760.0 0 gi|116439|sp|P25122.1|KCNC1_RAT RecName: Full=Pota ( 585) 3443 759.7 0 gi|109107145|ref|XP_001087671.1| PREDICTED: simila ( 566) 3437 758.4 1.3e-216 gi|109107143|ref|XP_001087915.1| PREDICTED: simila ( 585) 3437 758.4 1.3e-216 gi|164451488|ref|NP_001106752.1| Shaw-related volt ( 585) 3427 756.3 6e-216 gi|4960161|gb|AAD34618.1|AF153198_1 Kv3.1 [Canis f ( 585) 3422 755.2 1.3e-215 gi|194213885|ref|XP_001918269.1| PREDICTED: potass ( 584) 3410 752.5 7.8e-215 gi|126332095|ref|XP_001366654.1| PREDICTED: simila ( 585) 3364 742.5 8.2e-212 gi|224050834|ref|XP_002197869.1| PREDICTED: potass ( 716) 3333 735.8 1e-209 gi|118091279|ref|XP_421008.2| PREDICTED: similar t ( 711) 3327 734.5 2.5e-209 gi|154757652|gb|AAI51787.1| KCNC1 protein [Bos tau ( 458) 3134 692.3 8.4e-197 gi|84181089|gb|ABC54955.1| voltage-gated potassium ( 603) 3023 668.2 2e-189 gi|190338404|gb|AAI63444.1| Similar to voltage-gat ( 605) 2957 653.8 4.2e-185 gi|165971080|gb|AAI58228.1| LOC100144936 protein [ ( 458) 2953 652.8 6.3e-185 gi|189537277|ref|XP_693971.3| PREDICTED: similar t ( 560) 2759 610.6 3.9e-172 gi|47220492|emb|CAG05518.1| unnamed protein produc ( 471) 2687 594.9 1.8e-167 gi|74188037|dbj|BAE37138.1| unnamed protein produc ( 479) 2663 589.7 6.9e-166 gi|194665528|ref|XP_613047.3| PREDICTED: similar t ( 623) 2546 564.3 4e-158 gi|109013381|ref|XP_001099694.1| PREDICTED: simila ( 623) 2515 557.5 4.3e-156 gi|149708728|ref|XP_001496203.1| PREDICTED: potass ( 626) 2515 557.5 4.3e-156 gi|109013384|ref|XP_001099902.1| PREDICTED: simila ( 632) 2515 557.5 4.3e-156 gi|109013390|ref|XP_001099598.1| PREDICTED: simila ( 649) 2515 557.5 4.4e-156 gi|109013387|ref|XP_001099797.1| PREDICTED: simila ( 622) 2511 556.6 7.9e-156 gi|114559036|ref|XP_001163532.1| PREDICTED: Shaw-r ( 599) 2510 556.4 8.9e-156 gi|75517894|gb|AAI01770.1| Potassium voltage-gated ( 582) 2508 556.0 1.2e-155 gi|114559028|ref|XP_513651.2| PREDICTED: Shaw-rela ( 626) 2503 554.9 2.6e-155 gi|114559030|ref|XP_001163681.1| PREDICTED: Shaw-r ( 635) 2503 554.9 2.7e-155 gi|114559034|ref|XP_001163574.1| PREDICTED: Shaw-r ( 652) 2503 554.9 2.7e-155 gi|119576840|gb|EAW56436.1| potassium voltage-gate ( 626) 2501 554.5 3.6e-155 gi|66774206|sp|Q03721.2|KCNC4_HUMAN RecName: Full= ( 635) 2501 554.5 3.6e-155 gi|338077|gb|AAA57263.1| potassium channel protein ( 582) 2500 554.2 3.9e-155 gi|114559032|ref|XP_001163611.1| PREDICTED: Shaw-r ( 625) 2499 554.0 4.8e-155 gi|66774019|sp|Q8R1C0.1|KCNC4_MOUSE RecName: Full= ( 628) 2340 519.4 1.3e-144 gi|3023483|sp|Q63734.1|KCNC4_RAT RecName: Full=Pot ( 625) 2338 518.9 1.8e-144 gi|73959912|ref|XP_547235.2| PREDICTED: similar to ( 642) 2333 517.9 3.8e-144 gi|126311557|ref|XP_001381968.1| PREDICTED: simila ( 663) 2305 511.8 2.7e-142 gi|47228763|emb|CAG07495.1| unnamed protein produc ( 582) 2259 501.7 2.6e-139 gi|6959886|gb|AAF33249.1| Shaw-related potassium c ( 587) 2032 452.2 2e-124 gi|149635587|ref|XP_001510646.1| PREDICTED: simila ( 528) 2029 451.5 2.9e-124 gi|5817540|gb|AAD52813.1|AF132853_1 Kv3.1 potassiu ( 592) 1932 430.4 7.4e-118 gi|221039908|dbj|BAH11717.1| unnamed protein produ ( 583) 1893 421.9 2.6e-115 gi|21753834|dbj|BAC04407.1| unnamed protein produc ( 558) 1889 421.0 4.7e-115 gi|16611600|gb|AAL27273.1|AF268897_1 voltage gated ( 613) 1889 421.1 5e-115 gi|29692336|gb|AAO89503.1| Kv3.2d voltage-gated po ( 629) 1889 421.1 5.1e-115 >>gi|1352085|sp|P48547.1|KCNC1_HUMAN RecName: Full=Potas (511 aa) initn: 3508 init1: 3508 opt: 3508 Z-score: 4130.4 bits: 773.8 E(): 0 Smith-Waterman score: 3508; 100.000% identity (100.000% similar) in 511 aa overlap (5-515:1-511) 10 20 30 40 50 60 fh1310 GGAAMGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF 10 20 30 40 50 70 80 90 100 110 120 fh1310 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE 60 70 80 90 100 110 130 140 150 160 170 180 fh1310 EALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 EALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI 120 130 140 150 160 170 190 200 210 220 230 240 fh1310 WALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 WALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY 180 190 200 210 220 230 250 260 270 280 290 300 fh1310 REAETEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 REAETEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS 240 250 260 270 280 290 310 320 330 340 350 360 fh1310 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV 300 310 320 330 340 350 370 380 390 400 410 420 fh1310 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV 360 370 380 390 400 410 430 440 450 460 470 480 fh1310 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV 420 430 440 450 460 470 490 500 510 fh1310 NSPHHSTQSDTCPLAQEEILEINRAGRKPLRGMSI ::::::::::::::::::::::::::::::::::: gi|135 NSPHHSTQSDTCPLAQEEILEINRAGRKPLRGMSI 480 490 500 510 >>gi|116438|sp|P15388.1|KCNC1_MOUSE RecName: Full=Potass (511 aa) initn: 3507 init1: 3507 opt: 3507 Z-score: 4129.2 bits: 773.6 E(): 0 Smith-Waterman score: 3507; 99.804% identity (100.000% similar) in 511 aa overlap (5-515:1-511) 10 20 30 40 50 60 fh1310 GGAAMGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF 10 20 30 40 50 70 80 90 100 110 120 fh1310 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE 60 70 80 90 100 110 130 140 150 160 170 180 fh1310 EALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 EALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI 120 130 140 150 160 170 190 200 210 220 230 240 fh1310 WALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 WALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY 180 190 200 210 220 230 250 260 270 280 290 300 fh1310 REAETEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|116 REAETEAFLTYIEGVCVVWFTFEFLMRVVFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS 240 250 260 270 280 290 310 320 330 340 350 360 fh1310 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV 300 310 320 330 340 350 370 380 390 400 410 420 fh1310 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV 360 370 380 390 400 410 430 440 450 460 470 480 fh1310 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV 420 430 440 450 460 470 490 500 510 fh1310 NSPHHSTQSDTCPLAQEEILEINRAGRKPLRGMSI ::::::::::::::::::::::::::::::::::: gi|116 NSPHHSTQSDTCPLAQEEILEINRAGRKPLRGMSI 480 490 500 510 >>gi|76825377|gb|AAI07130.1| Potassium voltage-gated cha (511 aa) initn: 3502 init1: 3502 opt: 3502 Z-score: 4123.3 bits: 772.5 E(): 0 Smith-Waterman score: 3502; 99.804% identity (100.000% similar) in 511 aa overlap (5-515:1-511) 10 20 30 40 50 60 fh1310 GGAAMGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF :::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|768 MGQGDESERIVINVGGTRHQTHRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF 10 20 30 40 50 70 80 90 100 110 120 fh1310 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE 60 70 80 90 100 110 130 140 150 160 170 180 fh1310 EALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 EALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI 120 130 140 150 160 170 190 200 210 220 230 240 fh1310 WALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 WALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY 180 190 200 210 220 230 250 260 270 280 290 300 fh1310 REAETEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 REAETEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS 240 250 260 270 280 290 310 320 330 340 350 360 fh1310 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV 300 310 320 330 340 350 370 380 390 400 410 420 fh1310 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV 360 370 380 390 400 410 430 440 450 460 470 480 fh1310 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV 420 430 440 450 460 470 490 500 510 fh1310 NSPHHSTQSDTCPLAQEEILEINRAGRKPLRGMSI ::::::::::::::::::::::::::::::::::: gi|768 NSPHHSTQSDTCPLAQEEILEINRAGRKPLRGMSI 480 490 500 510 >>gi|109107147|ref|XP_001087790.1| PREDICTED: similar to (511 aa) initn: 3501 init1: 3501 opt: 3501 Z-score: 4122.2 bits: 772.3 E(): 0 Smith-Waterman score: 3501; 99.609% identity (100.000% similar) in 511 aa overlap (5-515:1-511) 10 20 30 40 50 60 fh1310 GGAAMGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF 10 20 30 40 50 70 80 90 100 110 120 fh1310 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE 60 70 80 90 100 110 130 140 150 160 170 180 fh1310 EALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|109 EALDSFGGAPLDNSADDADAEGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI 120 130 140 150 160 170 190 200 210 220 230 240 fh1310 WALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 WALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY 180 190 200 210 220 230 250 260 270 280 290 300 fh1310 REAETEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|109 REAETEAFLTYIEGVCVVWFTFEFLMRVVFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS 240 250 260 270 280 290 310 320 330 340 350 360 fh1310 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV 300 310 320 330 340 350 370 380 390 400 410 420 fh1310 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV 360 370 380 390 400 410 430 440 450 460 470 480 fh1310 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV 420 430 440 450 460 470 490 500 510 fh1310 NSPHHSTQSDTCPLAQEEILEINRAGRKPLRGMSI ::::::::::::::::::::::::::::::::::: gi|109 NSPHHSTQSDTCPLAQEEILEINRAGRKPLRGMSI 480 490 500 510 >>gi|60547266|gb|AAX23601.1| voltage-gated potassium cha (511 aa) initn: 3491 init1: 3491 opt: 3491 Z-score: 4110.4 bits: 770.1 E(): 0 Smith-Waterman score: 3491; 99.413% identity (99.609% similar) in 511 aa overlap (5-515:1-511) 10 20 30 40 50 60 fh1310 GGAAMGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|605 MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF 10 20 30 40 50 70 80 90 100 110 120 fh1310 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|605 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE 60 70 80 90 100 110 130 140 150 160 170 180 fh1310 EALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|605 EALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI 120 130 140 150 160 170 190 200 210 220 230 240 fh1310 WALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY ::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: gi|605 WALFEDPYSSRYARYVAFAYPFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY 180 190 200 210 220 230 250 260 270 280 290 300 fh1310 REAETEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|605 REAETEAFLTYIEGVCVVWFTFEFLMRVVFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS 240 250 260 270 280 290 310 320 330 340 350 360 fh1310 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|605 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV 300 310 320 330 340 350 370 380 390 400 410 420 fh1310 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|605 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV 360 370 380 390 400 410 430 440 450 460 470 480 fh1310 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|605 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV 420 430 440 450 460 470 490 500 510 fh1310 NSPHHSTQSDTCPLAQEEILEINRAGRKPLRGMSI ::::::::::::::::::::::::::::::::::: gi|605 NSPHHSTQSDTCPLAQEEILEINRAGRKPLRGMSI 480 490 500 510 >>gi|114636411|ref|XP_001172695.1| PREDICTED: similar to (566 aa) initn: 3528 init1: 3444 opt: 3444 Z-score: 4054.5 bits: 759.9 E(): 0 Smith-Waterman score: 3444; 99.603% identity (99.603% similar) in 504 aa overlap (5-508:1-504) 10 20 30 40 50 60 fh1310 GGAAMGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF 10 20 30 40 50 70 80 90 100 110 120 fh1310 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE 60 70 80 90 100 110 130 140 150 160 170 180 fh1310 EALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI 120 130 140 150 160 170 190 200 210 220 230 240 fh1310 WALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 WALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY 180 190 200 210 220 230 250 260 270 280 290 300 fh1310 REAETEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 REAETEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS 240 250 260 270 280 290 310 320 330 340 350 360 fh1310 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV 300 310 320 330 340 350 370 380 390 400 410 420 fh1310 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV 360 370 380 390 400 410 430 440 450 460 470 480 fh1310 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV 420 430 440 450 460 470 490 500 510 fh1310 NSPHHSTQSDTCPLAQEEILEINRAGRKPLRGMSI ::::::::::::::::::::::::: : gi|114 NSPHHSTQSDTCPLAQEEILEINRADSKLNGEVAKAALANEDCPHIDQALTPDEGLPFTR 480 490 500 510 520 530 >>gi|119588831|gb|EAW68425.1| potassium voltage-gated ch (585 aa) initn: 3528 init1: 3444 opt: 3444 Z-score: 4054.3 bits: 760.0 E(): 0 Smith-Waterman score: 3444; 99.603% identity (99.603% similar) in 504 aa overlap (5-508:1-504) 10 20 30 40 50 60 fh1310 GGAAMGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF 10 20 30 40 50 70 80 90 100 110 120 fh1310 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE 60 70 80 90 100 110 130 140 150 160 170 180 fh1310 EALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI 120 130 140 150 160 170 190 200 210 220 230 240 fh1310 WALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 WALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY 180 190 200 210 220 230 250 260 270 280 290 300 fh1310 REAETEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 REAETEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS 240 250 260 270 280 290 310 320 330 340 350 360 fh1310 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV 300 310 320 330 340 350 370 380 390 400 410 420 fh1310 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV 360 370 380 390 400 410 430 440 450 460 470 480 fh1310 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV 420 430 440 450 460 470 490 500 510 fh1310 NSPHHSTQSDTCPLAQEEILEINRAGRKPLRGMSI ::::::::::::::::::::::::: : gi|119 NSPHHSTQSDTCPLAQEEILEINRADSKLNGEVAKAALANEDCPHIDQALTPDEGLPFTR 480 490 500 510 520 530 >>gi|116439|sp|P25122.1|KCNC1_RAT RecName: Full=Potassiu (585 aa) initn: 3527 init1: 3443 opt: 3443 Z-score: 4053.1 bits: 759.7 E(): 0 Smith-Waterman score: 3443; 99.405% identity (99.603% similar) in 504 aa overlap (5-508:1-504) 10 20 30 40 50 60 fh1310 GGAAMGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF 10 20 30 40 50 70 80 90 100 110 120 fh1310 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE 60 70 80 90 100 110 130 140 150 160 170 180 fh1310 EALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 EALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI 120 130 140 150 160 170 190 200 210 220 230 240 fh1310 WALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 WALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY 180 190 200 210 220 230 250 260 270 280 290 300 fh1310 REAETEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|116 REAETEAFLTYIEGVCVVWFTFEFLMRVVFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS 240 250 260 270 280 290 310 320 330 340 350 360 fh1310 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV 300 310 320 330 340 350 370 380 390 400 410 420 fh1310 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV 360 370 380 390 400 410 430 440 450 460 470 480 fh1310 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV 420 430 440 450 460 470 490 500 510 fh1310 NSPHHSTQSDTCPLAQEEILEINRAGRKPLRGMSI ::::::::::::::::::::::::: : gi|116 NSPHHSTQSDTCPLAQEEILEINRADSKLNGEVAKAALANEDCPHIDQALTPDEGLPFTR 480 490 500 510 520 530 >>gi|109107145|ref|XP_001087671.1| PREDICTED: similar to (566 aa) initn: 3521 init1: 3437 opt: 3437 Z-score: 4046.2 bits: 758.4 E(): 1.3e-216 Smith-Waterman score: 3437; 99.206% identity (99.603% similar) in 504 aa overlap (5-508:1-504) 10 20 30 40 50 60 fh1310 GGAAMGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF 10 20 30 40 50 70 80 90 100 110 120 fh1310 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE 60 70 80 90 100 110 130 140 150 160 170 180 fh1310 EALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|109 EALDSFGGAPLDNSADDADAEGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI 120 130 140 150 160 170 190 200 210 220 230 240 fh1310 WALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 WALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY 180 190 200 210 220 230 250 260 270 280 290 300 fh1310 REAETEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|109 REAETEAFLTYIEGVCVVWFTFEFLMRVVFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS 240 250 260 270 280 290 310 320 330 340 350 360 fh1310 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV 300 310 320 330 340 350 370 380 390 400 410 420 fh1310 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV 360 370 380 390 400 410 430 440 450 460 470 480 fh1310 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV 420 430 440 450 460 470 490 500 510 fh1310 NSPHHSTQSDTCPLAQEEILEINRAGRKPLRGMSI ::::::::::::::::::::::::: : gi|109 NSPHHSTQSDTCPLAQEEILEINRADSKLNGEVAKAALANEDCPHIDQALTPDEGLPFTR 480 490 500 510 520 530 >>gi|109107143|ref|XP_001087915.1| PREDICTED: similar to (585 aa) initn: 3521 init1: 3437 opt: 3437 Z-score: 4046.0 bits: 758.4 E(): 1.3e-216 Smith-Waterman score: 3437; 99.206% identity (99.603% similar) in 504 aa overlap (5-508:1-504) 10 20 30 40 50 60 fh1310 GGAAMGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFF 10 20 30 40 50 70 80 90 100 110 120 fh1310 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FDRHPGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAE 60 70 80 90 100 110 130 140 150 160 170 180 fh1310 EALDSFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|109 EALDSFGGAPLDNSADDADAEGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRI 120 130 140 150 160 170 190 200 210 220 230 240 fh1310 WALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 WALFEDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYY 180 190 200 210 220 230 250 260 270 280 290 300 fh1310 REAETEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|109 REAETEAFLTYIEGVCVVWFTFEFLMRVVFCPNKVEFIKNSLNIIDFVAILPFYLEVGLS 240 250 260 270 280 290 310 320 330 340 350 360 fh1310 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV 300 310 320 330 340 350 370 380 390 400 410 420 fh1310 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLV 360 370 380 390 400 410 430 440 450 460 470 480 fh1310 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVV 420 430 440 450 460 470 490 500 510 fh1310 NSPHHSTQSDTCPLAQEEILEINRAGRKPLRGMSI ::::::::::::::::::::::::: : gi|109 NSPHHSTQSDTCPLAQEEILEINRADSKLNGEVAKAALANEDCPHIDQALTPDEGLPFTR 480 490 500 510 520 530 515 residues in 1 query sequences 3071326396 residues in 8985982 library sequences Tcomplib [34.26] (8 proc) start: Thu Jun 18 08:25:17 2009 done: Thu Jun 18 08:28:19 2009 Total Scan time: 1161.250 Total Display time: 0.170 Function used was FASTA [version 34.26.5 April 26, 2007]